BLASTX nr result

ID: Glycyrrhiza35_contig00016899 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00016899
         (746 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003595510.1 replication factor-A carboxy-terminal domain prot...    68   2e-09
XP_013452088.1 replication factor-A carboxy-terminal domain prot...    63   9e-08
XP_012567644.1 PREDICTED: uncharacterized protein LOC101506735, ...    59   2e-06

>XP_003595510.1 replication factor-A carboxy-terminal domain protein [Medicago
           truncatula] AES65761.1 replication factor-A
           carboxy-terminal domain protein [Medicago truncatula]
          Length = 549

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 56/184 (30%), Positives = 95/184 (51%), Gaps = 15/184 (8%)
 Frame = +3

Query: 6   MVDTFDKNAVGSDLPAEILGLVNKTYLFKVDLRNFGS--RFDRSFRVKRICSDEIMIEKF 179
           M+++       S++P +IL +V K+YLFKV+  N GS   +++S+RVKR+ +D +++EKF
Sbjct: 372 MIESCGMGTDASEVPKDILAMVEKSYLFKVE-TNLGSSTMYEKSYRVKRVTADPVLVEKF 430

Query: 180 KA-----LKSFSKTTEDVVDGV------ESGEAIMQDLMIKFSDAVSDS-QALDSVVADS 323
           +      +K+  +   ++VDGV      +S + I+QDLM K  +  + S   +D  +  S
Sbjct: 431 QTKYKDLMKNVHEEDVNLVDGVVDGGALKSSDTIVQDLMKKLDEPTAGSVDGIDESLTAS 490

Query: 324 LPPPNAIDDSQPVPDDIVSLDCTQNDAIVEVGATPTKRHIGVEGHDGEGSNSGIKK-KAI 500
                 +     V D  V  D    DA  +   T +KR I     + +GS+  ++  K I
Sbjct: 491 ------VHGIGLVQDVAVMSDGGDVDAPDKRNVTVSKRPIDGSKVEKDGSSKSLELIKRI 544

Query: 501 KVEK 512
           K EK
Sbjct: 545 KTEK 548


>XP_013452088.1 replication factor-A carboxy-terminal domain protein [Medicago
           truncatula] KEH26116.1 replication factor-A
           carboxy-terminal domain protein [Medicago truncatula]
          Length = 428

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 10/172 (5%)
 Frame = +3

Query: 30  AVGSD----LPAEILGLVNKTYLFKVDLR-NFGSRFDRSFRVKRICSDEIMIEKFKALKS 194
           ++GSD    LP EI  LV  T+LFKV+   +  +RF++S+RV+RI ++  ++++F  + +
Sbjct: 240 SMGSDESGTLPKEISSLVESTFLFKVETNISTDARFEKSYRVRRISNNVDLLKRFTGVPT 299

Query: 195 FSKTTE---DVVDGVESGEAIMQDLMIKFSDA-VSDSQALDSVVADSLPPPNAIDDSQPV 362
            +   E   + V+  E+  ++ Q+L+ KF D+ V  ++ +D+  A               
Sbjct: 300 EAPVVEGSFEAVENAENDSSVNQNLLKKFGDSKVIGTKDVDAEKA--------------- 344

Query: 363 PDDIVSLDCTQNDAIVEVGATPTKRHIGVEGHDGEGSNSGIK-KKAIKVEKD 515
                 +D T +    EV  TP KR    +G +G G N  +K  K IKVEKD
Sbjct: 345 ------VDLTND----EVDVTPAKRSCPFDG-EGSGGNGPVKLLKNIKVEKD 385


>XP_012567644.1 PREDICTED: uncharacterized protein LOC101506735, partial [Cicer
           arietinum]
          Length = 613

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 1/171 (0%)
 Frame = +3

Query: 6   MVDTFDKNAVGSDLPAEILGLVNKTYLFKVDLRN-FGSRFDRSFRVKRICSDEIMIEKFK 182
           ++   D++     +P EI  LV K  LFK++ +N   S F++SFRVK++C D  +I+K +
Sbjct: 469 LLHEMDQDPQSDIVPKEIGDLVEKQLLFKIEAKNDVNSNFEKSFRVKKLCGDLDIIKKLR 528

Query: 183 ALKSFSKTTEDVVDGVESGEAIMQDLMIKFSDAVSDSQALDSVVADSLPPPNAIDDSQPV 362
            + +  K    + + +E G  +  DL  KF +  +D         D    PN++    PV
Sbjct: 529 YV-AVEKVDVGLDNHIEGG--VTNDLNNKFEEEATD---------DKYQVPNSV--HVPV 574

Query: 363 PDDIVSLDCTQNDAIVEVGATPTKRHIGVEGHDGEGSNSGIKKKAIKVEKD 515
           P +    DC           TP KR       D +G NS    K +K+EK+
Sbjct: 575 PVEYDYNDC-----------TPLKRGFIEVADDNDGVNSK-NVKNVKIEKE 613


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