BLASTX nr result

ID: Glycyrrhiza35_contig00016285 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00016285
         (204 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU48147.1 hypothetical protein TSUD_302800 [Trifolium subterran...    52   4e-06
GAU28663.1 hypothetical protein TSUD_159450 [Trifolium subterran...    51   5e-06

>GAU48147.1 hypothetical protein TSUD_302800 [Trifolium subterraneum]
          Length = 377

 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
 Frame = -1

Query: 204 PSQAREHGIVESQSQLPQMDWPQILVNFACCVLSLFEKPHSPFIFSFRDIFMCRC----- 40
           PSQA+++ +V S   + Q DWP IL  F  C+L LF+  ++  +F  +D ++C C     
Sbjct: 121 PSQAQDNNLVISS--VSQFDWPSILAVFGYCILLLFKVDNNK-LFRLKDNYLCNCLSIAR 177

Query: 39  VDELKRRVGC 10
           +DEL  +VGC
Sbjct: 178 IDELGEKVGC 187


>GAU28663.1 hypothetical protein TSUD_159450 [Trifolium subterraneum]
          Length = 172

 Score = 50.8 bits (120), Expect = 5e-06
 Identities = 28/64 (43%), Positives = 39/64 (60%)
 Frame = -1

Query: 204 PSQAREHGIVESQSQLPQMDWPQILVNFACCVLSLFEKPHSPFIFSFRDIFMCRCVDELK 25
           P  A+E  I   ++++PQ+DWP ILV F+CCVL LF+K       +    FM RC+ EL+
Sbjct: 19  PYMAKECNI--DKNKIPQLDWPTILVYFSCCVLVLFKKFTDE---ASHSDFMSRCICELR 73

Query: 24  RRVG 13
             VG
Sbjct: 74  EIVG 77


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