BLASTX nr result

ID: Glycyrrhiza35_contig00010687 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00010687
         (245 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_013468565.1 GRF zinc finger protein [Medicago truncatula] KEH...    62   9e-11
XP_003628960.1 GRF zinc finger protein [Medicago truncatula] AET...    62   2e-10
XP_003612076.1 GRF zinc finger protein [Medicago truncatula] AES...    60   8e-10
XP_003593148.1 GRF zinc finger protein [Medicago truncatula] AES...    59   2e-09
XP_013459499.1 GRF zinc finger protein [Medicago truncatula] KEH...    59   5e-09
XP_003589792.2 GRF zinc finger protein [Medicago truncatula] AES...    52   1e-06
XP_003593784.2 GRF zinc finger protein [Medicago truncatula] AES...    51   4e-06

>XP_013468565.1 GRF zinc finger protein [Medicago truncatula] KEH42602.1 GRF zinc
           finger protein [Medicago truncatula]
          Length = 115

 Score = 62.4 bits (150), Expect = 9e-11
 Identities = 27/62 (43%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
 Frame = -1

Query: 245 KRSCSFFRWYDGEVNERERKIIKGLLRRNDAMKSRERFLVAGCVLVSN-FHLSVVIVTRG 69
           +R CSFFRW+D EV +R++K+I+GLL++NDA+K++E+ L+   V++     +SV+++   
Sbjct: 54  RRKCSFFRWFDPEVPDRQKKLIRGLLKKNDALKNKEKMLLLTIVILGMLLFVSVLVILIK 113

Query: 68  LG 63
           LG
Sbjct: 114 LG 115


>XP_003628960.1 GRF zinc finger protein [Medicago truncatula] AET03436.1 GRF zinc
           finger protein [Medicago truncatula]
          Length = 114

 Score = 61.6 bits (148), Expect = 2e-10
 Identities = 29/60 (48%), Positives = 40/60 (66%)
 Frame = -1

Query: 245 KRSCSFFRWYDGEVNERERKIIKGLLRRNDAMKSRERFLVAGCVLVSNFHLSVVIVTRGL 66
           +R C+FFRWYD EV +R+ KII+GLLR+ND +K +ER LV    L+       V++  GL
Sbjct: 52  RRKCNFFRWYDPEVPDRQNKIIRGLLRKNDELKKKERSLVIVIGLLGIMLFMCVLLALGL 111


>XP_003612076.1 GRF zinc finger protein [Medicago truncatula] AES95034.1 GRF zinc
           finger protein [Medicago truncatula]
          Length = 116

 Score = 60.1 bits (144), Expect = 8e-10
 Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
 Frame = -1

Query: 245 KRSCSFFRWYDGEVNERERKIIKGLLRRNDAMKSRERFLVAGCVLVSN-FHLSVVIVTRG 69
           +R CSFFRW+D EV ER++K+I+GLL++NDAMK +E+ L    V++     LS+ ++   
Sbjct: 53  RRKCSFFRWFDPEVPERQKKLIRGLLKKNDAMKKKEKKLEFTIVVLGMLLFLSLFVIFIK 112

Query: 68  LG 63
           LG
Sbjct: 113 LG 114


>XP_003593148.1 GRF zinc finger protein [Medicago truncatula] AES63399.1 GRF zinc
           finger protein [Medicago truncatula]
          Length = 116

 Score = 59.3 bits (142), Expect = 2e-09
 Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
 Frame = -1

Query: 245 KRSCSFFRWYDGEVNERERKIIKGLLRRNDAMKSRERFLVAGCVLVSN-FHLSVVIVTRG 69
           +R CSFFRW+D EV ER +K+I+GLL++NDAMK +E+ L    V++     LS+ ++   
Sbjct: 53  RRKCSFFRWFDPEVPERRKKLIRGLLKKNDAMKKKEKKLEFTIVVLGMLLFLSLFVIFIK 112

Query: 68  LG 63
           LG
Sbjct: 113 LG 114


>XP_013459499.1 GRF zinc finger protein [Medicago truncatula] KEH33530.1 GRF zinc
           finger protein [Medicago truncatula]
          Length = 153

 Score = 58.9 bits (141), Expect = 5e-09
 Identities = 25/46 (54%), Positives = 35/46 (76%)
 Frame = -1

Query: 245 KRSCSFFRWYDGEVNERERKIIKGLLRRNDAMKSRERFLVAGCVLV 108
           KR C+FFRWYD EV +R++KII+ LLR+ND +K +ER  V   V++
Sbjct: 89  KRKCNFFRWYDPEVPDRQKKIIRELLRKNDELKKKERSFVIAIVVL 134


>XP_003589792.2 GRF zinc finger protein [Medicago truncatula] AES60043.2 GRF zinc
           finger protein [Medicago truncatula]
          Length = 114

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 23/54 (42%), Positives = 39/54 (72%), Gaps = 5/54 (9%)
 Frame = -1

Query: 245 KRSCSFFRWYDGEVNERERKIIKGLLRRNDAMKSRER-----FLVAGCVLVSNF 99
           +R C FFR +D EV +R++KII+GLL++NDA++ +ER      ++ G +L+ +F
Sbjct: 52  RRKCKFFRRFDPEVPDRQKKIIRGLLKKNDALRKKERTHVSIIVILGVLLLLSF 105


>XP_003593784.2 GRF zinc finger protein [Medicago truncatula] AES64035.2 GRF zinc
           finger protein [Medicago truncatula]
          Length = 125

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
 Frame = -1

Query: 236 CSFFRWYDGEVNERERKIIKGLLRRNDAMKSRERFLVAGCV---LVSNFHLSVVIV 78
           C+FF+WYD   +ERE+K+I  LL++ND +++    LV G V   L+  F L V+++
Sbjct: 66  CNFFKWYDEACSEREKKLINALLKKNDLLQNSNNKLVIGIVCLGLIVMFQLIVIVM 121


Top