BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00009248
         (289 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KHN40328.1 Putative ribonuclease H protein [Glycine soja]              89   4e-20
KHN33900.1 Putative ribonuclease H protein, partial [Glycine soja]     91   2e-19
KYP56001.1 Putative ribonuclease H protein At1g65750 family, par...    86   1e-17
KYP78366.1 Putative ribonuclease H protein At1g65750 family [Caj...    86   2e-17
KHN10876.1 hypothetical protein glysoja_038175, partial [Glycine...    80   2e-17
KYP31438.1 hypothetical protein KK1_048247, partial [Cajanus cajan]    83   8e-17
GAU13776.1 hypothetical protein TSUD_82850 [Trifolium subterraneum]    82   5e-16
KYP53392.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca...    80   1e-15
GAU11845.1 hypothetical protein TSUD_75960 [Trifolium subterraneum]    77   1e-14
GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum]    75   9e-14
KYP61064.1 Putative ribonuclease H protein At1g65750 family, par...    75   9e-14
GAU24540.1 hypothetical protein TSUD_156530 [Trifolium subterran...    74   2e-13
GAU10809.1 hypothetical protein TSUD_424890, partial [Trifolium ...    70   1e-12
KYP76161.1 Putative ribonuclease H protein At1g65750 [Cajanus ca...    72   1e-12
GAU50504.1 hypothetical protein TSUD_409790 [Trifolium subterran...    72   2e-12
GAU22350.1 hypothetical protein TSUD_106780 [Trifolium subterran...    70   5e-12
GAU35685.1 hypothetical protein TSUD_162570 [Trifolium subterran...    70   7e-12
GAU50029.1 hypothetical protein TSUD_240220 [Trifolium subterran...    69   8e-12
GAU43217.1 hypothetical protein TSUD_301040 [Trifolium subterran...    68   3e-11
GAU42452.1 hypothetical protein TSUD_235210 [Trifolium subterran...    68   3e-11

>KHN40328.1 Putative ribonuclease H protein [Glycine soja]
          Length = 175

 Score = 88.6 bits (218), Expect = 4e-20
 Identities = 35/93 (37%), Positives = 55/93 (59%)
 Frame = -1

Query: 280 VRDVFHEGHWQFDRSYTHIPLDIQLVMRSLVLTDSLNDVLIWGPATTGKYSVNSGYNWLL 101
           +RDV   G W + + Y+ IP +++  M SLV+ D+  D++IWG   +G ++  S Y W +
Sbjct: 13  IRDVLVNGQWSWGKFYSIIPDEVKNKMTSLVMDDNSYDIIIWGQLKSGIFTAKSAYEWWI 72

Query: 100 HLDTDAHDQQASWTWVWKLNLPENLRHFIWQIM 2
           H   +  +    W WVWKL  PEN++HF W I+
Sbjct: 73  HEPANHSNFPGDWNWVWKLQTPENIKHFTWLIL 105


>KHN33900.1 Putative ribonuclease H protein, partial [Glycine soja]
          Length = 385

 Score = 90.5 bits (223), Expect = 2e-19
 Identities = 29/92 (31%), Positives = 62/92 (67%)
 Frame = -1

Query: 286 MRVRDVFHEGHWQFDRSYTHIPLDIQLVMRSLVLTDSLNDVLIWGPATTGKYSVNSGYNW 107
           ++ +D+F +G W F++  T +P++ +  ++S +L D++ DV++WGP+    ++  + + W
Sbjct: 123 LKAQDIFQDGIWHFEKLSTPLPMETKKQIQSYILNDNMEDVIVWGPSGDKIFTATTAFKW 182

Query: 106 LLHLDTDAHDQQASWTWVWKLNLPENLRHFIW 11
           L+ +++    Q  +W+W+WKL +PEN++HF W
Sbjct: 183 LIAVNSLPISQFGNWSWIWKLQIPENIKHFFW 214


>KYP56001.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 414

 Score = 85.9 bits (211), Expect = 1e-17
 Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
 Frame = -1

Query: 286 MRVRDVFHEGHWQFDRSYTHIPLDIQLVM--RSLVLTDSLNDVLIWGPATTGKYSVNSGY 113
           MRVRDV++E  W     +T +  D   V+  +S +L++ L+D ++W P  TG YS  SGY
Sbjct: 23  MRVRDVWNEEGWNLSSLWTSLSEDFNHVLFKQSFLLSEGLHDCIVWQPDLTGNYSAKSGY 82

Query: 112 NWLLHLDTDAHDQQASWTWVWKLNLPENLRHFIW 11
           NWL   + +    +  W W+WK++ PEN++ F+W
Sbjct: 83  NWLT-FEPEQQPSEDKWLWIWKIHAPENIKFFLW 115


>KYP78366.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 1090

 Score = 85.9 bits (211), Expect = 2e-17
 Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
 Frame = -1

Query: 286 MRVRDVFHEGHWQFDRSYTHIPLDIQ--LVMRSLVLTDSLNDVLIWGPATTGKYSVNSGY 113
           MRVRDV++E  W     +T +  D    L+ ++L+L++ L+D ++W P  TG YS  SGY
Sbjct: 699 MRVRDVWNEEGWNLSSLWTSLSKDFNHVLLKQTLLLSEGLHDCIVWKPDLTGNYSAKSGY 758

Query: 112 NWLLHLDTDAHDQQASWTWVWKLNLPENLRHFIW 11
           NWL   + +    +  W W+WK+  PEN++ F+W
Sbjct: 759 NWLT-FEPEQQPSEDKWLWIWKIYAPENIKFFLW 791


>KHN10876.1 hypothetical protein glysoja_038175, partial [Glycine soja]
          Length = 105

 Score = 79.7 bits (195), Expect = 2e-17
 Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
 Frame = -1

Query: 286 MRVRDVFHEGHWQFDRSYTHIPLDIQLVMRSLVLTDSLNDVLIWGPATTGKYSVNSGYNW 107
           + V D++ +G W FD  YT  PLD++L ++S+ L  ++++V IW P+  G YS    Y W
Sbjct: 17  LMVSDIYVDGCWNFDILYTQFPLDVKLEIQSVFLNPNVSNVHIWDPSAFGSYSTKCAYAW 76

Query: 106 LLHLDTD-----AHDQQASWTWVWKLNLP 35
           L  LD        +D   SW+W+WKL +P
Sbjct: 77  LTRLDDPFSLNLTNDNSDSWSWIWKLRVP 105


>KYP31438.1 hypothetical protein KK1_048247, partial [Cajanus cajan]
          Length = 373

 Score = 83.2 bits (204), Expect = 8e-17
 Identities = 30/90 (33%), Positives = 54/90 (60%)
 Frame = -1

Query: 280 VRDVFHEGHWQFDRSYTHIPLDIQLVMRSLVLTDSLNDVLIWGPATTGKYSVNSGYNWLL 101
           V++VF +G W F++ +T +P  ++  + S+ L  ++ D+ +W P+ +  YS    Y WL 
Sbjct: 255 VKNVFKDGTWNFNQLHTTLPSQVKYNINSIFLNQNVPDMFVWNPSQSRDYSAKFSYKWLT 314

Query: 100 HLDTDAHDQQASWTWVWKLNLPENLRHFIW 11
              T+ H    +W+W+W +NL EN++H IW
Sbjct: 315 REPTNLHTCAQTWSWIWSINLFENIKHLIW 344


>GAU13776.1 hypothetical protein TSUD_82850 [Trifolium subterraneum]
          Length = 559

 Score = 81.6 bits (200), Expect = 5e-16
 Identities = 37/98 (37%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
 Frame = -1

Query: 286 MRVRDVFHEGHWQFDRSYTHIPLDIQLVMRS--LVLTDSLNDVLIWGPATTGKYSVNSGY 113
           MRVRDV+ +G+WQF++ YT++P +I+  + S  + L  S+ND   W     G Y+V  GY
Sbjct: 328 MRVRDVYIDGNWQFNQLYTNLPQEIKEKLNSTTISLNPSINDCYTWKGNLNGIYTVRDGY 387

Query: 112 NWLLHLDTDAH-DQQASWTWVWKLNLPENLRHFIWQIM 2
            WL      A+  + ASW+W+W ++ PE ++ F+W ++
Sbjct: 388 YWLNRNSFSANATRVASWSWLWHVSAPEKIKFFLWTML 425


>KYP53392.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
          Length = 657

 Score = 80.5 bits (197), Expect = 1e-15
 Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
 Frame = -1

Query: 289 SMRVRDVFHEGHWQFDRSYTHIPLDIQLVMRSLVLT--DSLNDVLIWGPATTGKYSVNSG 116
           +++V +V  +G W  D  +T IP  ++  +  L +T   SL DV +W  A +G+Y+   G
Sbjct: 518 NLQVCEVLQQGKWNLDILHTPIPDTLRQRIEGLSMTLHHSLPDVWVWNGALSGRYTAYEG 577

Query: 115 YNWLLHLDTDAHDQQASWTWVWKLNLPENLRHFIWQI 5
           Y WLL  +   HD  + W W+W+L +PENL+ F+WQ+
Sbjct: 578 YKWLLAREDGIHD--SVWGWIWRLKIPENLKFFLWQL 612


>GAU11845.1 hypothetical protein TSUD_75960 [Trifolium subterraneum]
          Length = 386

 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
 Frame = -1

Query: 286 MRVRDVFHEGHWQFDRSYTHIPLDIQ--LVMRSLVLTDSLNDVLIWGPATTGKYSVNSGY 113
           MRVRDV+ +G W F+  YT +P++I+  L+   + L  S+ND   W     G Y+   GY
Sbjct: 47  MRVRDVYIDGIWNFNALYTALPMEIKERLISFPICLNPSINDCYTWKGNLQGIYTARDGY 106

Query: 112 NWLLHLDTDAHDQQA-SWTWVWKLNLPENLRHFIWQIM 2
           +WL      A+     SW+W+W L  PE ++ FIW ++
Sbjct: 107 HWLNRYAFSANPTSVVSWSWLWHLPAPEKIKFFIWTLL 144


>GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum]
          Length = 724

 Score = 75.1 bits (183), Expect = 9e-14
 Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
 Frame = -1

Query: 286 MRVRDVFHEGHWQFDRSYTHIPLDIQ--LVMRSLVLTDSLNDVLIWGPATTGKYSVNSGY 113
           MRVRDV+ +G W F+  YT +P++I+  L+   + L  S+ND   W     G Y+   GY
Sbjct: 350 MRVRDVYIDGIWNFNALYTALPMEIKERLISFPICLNPSINDCYTWKGNLQGIYTAWDGY 409

Query: 112 NWLLHLDTDAHDQQA-SWTWVWKLNLPENLRHFIWQIM 2
           +WL      A+     SW+W+W L  PE ++ FIW ++
Sbjct: 410 HWLNRNAFSANPTSVVSWSWLWHLPAPEKIKFFIWTLL 447


>KYP61064.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 977

 Score = 75.1 bits (183), Expect = 9e-14
 Identities = 31/97 (31%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
 Frame = -1

Query: 289 SMRVRDVFHEGHWQFDRSYTHIPLDIQ--LVMRSLVLTDSLNDVLIWGPATTGKYSVNSG 116
           ++RVRDV+ +G W  ++ ++ +  ++Q  ++   + L  S +D ++W  +T G+Y   +G
Sbjct: 583 TLRVRDVWQDGRWHLEQLHSWLSTELQARILSMQIWLHPSASDGIVWEASTNGEYLARTG 642

Query: 115 YNWLLHLDTDAHDQQASWTWVWKLNLPENLRHFIWQI 5
           Y WL   D    D    W W+W+L L E++R F+WQ+
Sbjct: 643 YQWLCDRDVVLSD---GWQWIWRLPLSESIRFFLWQV 676


>GAU24540.1 hypothetical protein TSUD_156530 [Trifolium subterraneum]
          Length = 1147

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 33/99 (33%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
 Frame = -1

Query: 286  MRVRDVFHEGHWQFDRSYTHIPLDIQ---LVMRSLVLTDSLNDVLIWGPATTGKYSVNSG 116
            +++ DV+  G W  ++ YT IP + +   L+++  ++ D L DV +W  ++ G Y+    
Sbjct: 752  LKINDVWCNGRWHLEKLYTSIPDEARNYILLLQPYIVNDIL-DVWVWQNSSNGVYTTKDA 810

Query: 115  YNWLLH-LDTDAHDQQASWTWVWKLNLPENLRHFIWQIM 2
            Y WLL+ L  ++H    +W W+W+L LP N++ F+WQI+
Sbjct: 811  YEWLLNPLPINSH---LNWKWIWQLKLPANIQFFVWQIL 846


>GAU10809.1 hypothetical protein TSUD_424890, partial [Trifolium subterraneum]
          Length = 218

 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
 Frame = -1

Query: 289 SMRVRDVFHEGHWQFDRSYTHIPLDIQLVMRSL--VLTDSLNDVLIWGPATTGKYSVNSG 116
           +++++DV+  G W  +  YT++P  I  V+  +   L  +L DV  W  +T+G Y+V   
Sbjct: 108 ALKIKDVWANGEWNLNNLYTNLPESIINVITMIQPCLVMNLPDVWTWDNSTSGVYTVKDA 167

Query: 115 YNWLLHLDTDAHDQQASWTWVWKLNLPENLRHFIWQ 8
           YNWL +      D   +W W+W+L LP N++ F WQ
Sbjct: 168 YNWLSN-PAPLFDHP-NWQWIWRLELPANIQFFTWQ 201


>KYP76161.1 Putative ribonuclease H protein At1g65750 [Cajanus cajan]
          Length = 514

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
 Frame = -1

Query: 289 SMRVRDVFHEGHWQFDRSYTHIPLDIQLVMRSLV--LTDSLNDVLIWGPATTGKYSVNSG 116
           ++RVRDV+ +G W  ++ ++ +  ++Q  + S+   L  S +D  +W  +T G+Y   +G
Sbjct: 219 TLRVRDVWQDGRWHLEQLHSWLSTELQARIFSMQIWLHPSASDGFVWEASTNGEYLARTG 278

Query: 115 YNWLLHLDTDAHDQQASWTWVWKLNLPENLRHFIWQI 5
           Y WL   D         W W+W+L L E++R F+WQ+
Sbjct: 279 YRWLCDRDVVL---SGGWQWIWRLPLSESIRFFLWQV 312


>GAU50504.1 hypothetical protein TSUD_409790 [Trifolium subterraneum]
          Length = 902

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
 Frame = -1

Query: 286 MRVRDVFHEGHWQFDRSYTHIPLDIQLVMRSLVL--TDSLNDVLIWGPATTGKYSVNSGY 113
           + ++DV           YT +P  +  ++ ++ +   DS++D  IW     G Y+  SGY
Sbjct: 685 LSIKDVLSTNSPHTHILYTQLPPSVSDLINNIHIKFNDSIDDAFIWTSNKNGSYTTKSGY 744

Query: 112 NWLLHLD--TDAHDQQASWTWVWKLNLPENLRHFIW 11
           NWLL L      H+   SW+W+WKL LPE ++ F W
Sbjct: 745 NWLLSLQNLVTPHNPSLSWSWIWKLQLPEKIKFFFW 780


>GAU22350.1 hypothetical protein TSUD_106780 [Trifolium subterraneum]
          Length = 1200

 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
 Frame = -1

Query: 286  MRVRDVFHEGHWQFDRSYTHIPLDIQ--LVMRSLVLTDSLNDVLIWGPATTGKYSVNSGY 113
            MRVRDV+ +G W F+  YT +  +I+  L   ++ L  S+ND   W     G Y+   GY
Sbjct: 862  MRVRDVYKDGMWLFNSLYTTLSQEIKENLNFITISLNPSVNDCYTWKGNLNGIYTARDGY 921

Query: 112  NWL-LHLDTDAHDQQASWTWVWKLNLPENLRHFIWQIM 2
             WL  H  +      ASW+W+W ++ PE L+ F W ++
Sbjct: 922  AWLNRHSFSATTISVASWSWLWHVSAPEKLKFFFWTML 959


>GAU35685.1 hypothetical protein TSUD_162570 [Trifolium subterraneum]
          Length = 1375

 Score = 69.7 bits (169), Expect = 7e-12
 Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
 Frame = -1

Query: 286  MRVRDVFHEGHWQFDRSYTHIPLDIQLVMRSL--VLTDSLNDVLIWGPATTGKYSVNSGY 113
            MRVRDV+    W F+  YT IP D+   ++ L   L   + D   W     G Y+   GY
Sbjct: 1095 MRVRDVYTNNKWNFNLLYTTIPADVMDHVKRLPVCLNSQVVDRYTWKGNLNGLYTAKEGY 1154

Query: 112  NWLLHL---DTDAHDQQASWTWVWKLNLPENLRHFIWQIM 2
             WL      DTD  D   SW WVW +  PE ++ FIW  +
Sbjct: 1155 YWLNRFAFSDTDTDD--ISWNWVWHIPAPEKIKFFIWSAL 1192


>GAU50029.1 hypothetical protein TSUD_240220 [Trifolium subterraneum]
          Length = 357

 Score = 69.3 bits (168), Expect = 8e-12
 Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
 Frame = -1

Query: 286 MRVRDVFHEGHWQFDRSYTHIPLDIQLVMRSLV--LTDSLNDVLIWGPATTGKYSVNSGY 113
           MRVRDV+ +G+W F+   T +P +I+  ++S+   L  S+ND   W     G Y+   GY
Sbjct: 58  MRVRDVYIDGNWHFNLLNTTLPQEIKEKLKSITICLNPSVNDCYTWKGNLNGIYTARDGY 117

Query: 112 NWLLHLDTDAHDQQ-ASWTWVWKLNLPENLRHFIWQIM 2
            W+      A+     SW+W+W ++ P+ ++ F W ++
Sbjct: 118 AWINRNSFSANTTSVTSWSWLWNVSAPKKIKFFFWTML 155


>GAU43217.1 hypothetical protein TSUD_301040 [Trifolium subterraneum]
          Length = 565

 Score = 67.8 bits (164), Expect = 3e-11
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
 Frame = -1

Query: 289 SMRVRDVFHEGHWQFDRSYTHIPLDIQLVMRSL--VLTDSLNDVLIWGPATTGKYSVNSG 116
           ++++ +V++ G W     YT+IP  +   ++SL   +   L D+  W    TG YS    
Sbjct: 237 ALKINEVWNNGEWNLQHLYTNIPQYVADAIKSLQQCIVSDLPDIWTWQNDNTGIYSTKDA 296

Query: 115 YNWLLHLDTDAHDQQASWTWVWKLNLPENLRHFIWQIM 2
           Y WLL  D    +    W W+W+L +P N++ F+WQ++
Sbjct: 297 YIWLL--DPMHINNLTGWHWIWQLCIPANIQFFLWQLV 332


>GAU42452.1 hypothetical protein TSUD_235210 [Trifolium subterraneum]
          Length = 770

 Score = 67.8 bits (164), Expect = 3e-11
 Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
 Frame = -1

Query: 280 VRDVFHEGHWQFDRSYTHIPLDIQLVMRS--LVLTDSLNDVLIWGPATTGKYSVNSGYNW 107
           V+DV   G+      YTH+P  +  V+ +      DS+ D  IW       Y+  SGY+W
Sbjct: 570 VKDVISTGNPHTQCLYTHLPSLVSDVINNTNFKFNDSIKDAFIWTNNKNDIYTTKSGYSW 629

Query: 106 LLHLDTDA--HDQQASWTWVWKLNLPENLRHFIW 11
           L  L      H+   SW+W+WKL LPE ++ F W
Sbjct: 630 LFSLRDPVTNHNPSHSWSWIWKLQLPEKIKFFFW 663