BLASTX nr result

ID: Glycyrrhiza35_contig00007631 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00007631
         (416 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003554474.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplasti...    65   7e-10
XP_003521499.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplasti...    62   1e-08
AFK49291.1 unknown [Lotus japonicus]                                   57   1e-07

>XP_003554474.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Glycine max]
           KHN43605.1 33 kDa ribonucleoprotein, chloroplastic
           [Glycine soja] KRG96273.1 hypothetical protein
           GLYMA_19G200700 [Glycine max]
          Length = 317

 Score = 65.5 bits (158), Expect = 7e-10
 Identities = 35/74 (47%), Positives = 39/74 (52%)
 Frame = +3

Query: 168 ICNRIYNXXXXXXXXXXXXXNFPQRPISQKPLNLNLKSQXXXXXXXXXXXXXXXXAALDE 347
           ICNRIYN             NFPQRP+SQKPL+LNL+SQ                AA D 
Sbjct: 11  ICNRIYNLSFTHPSLSLTSSNFPQRPVSQKPLSLNLESQSFALSFLPLHRLPPPFAAFDG 70

Query: 348 FEAAQDGTSSQQDD 389
            E AQD T SQQD+
Sbjct: 71  LEVAQDTTESQQDE 84


>XP_003521499.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Glycine max]
           KHN22601.1 33 kDa ribonucleoprotein, chloroplastic
           [Glycine soja] KRH68017.1 hypothetical protein
           GLYMA_03G202900 [Glycine max]
          Length = 314

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 35/74 (47%), Positives = 36/74 (48%)
 Frame = +3

Query: 168 ICNRIYNXXXXXXXXXXXXXNFPQRPISQKPLNLNLKSQXXXXXXXXXXXXXXXXAALDE 347
           ICNRIYN             NF QRPISQKP  LNLKSQ                AA D 
Sbjct: 8   ICNRIYNLSFTHPSLSLTTCNFRQRPISQKPFTLNLKSQSFTLSFFPLHRLPPPSAAFDG 67

Query: 348 FEAAQDGTSSQQDD 389
           FE AQD T  QQD+
Sbjct: 68  FEVAQDTTEFQQDE 81


>AFK49291.1 unknown [Lotus japonicus]
          Length = 162

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 34/74 (45%), Positives = 37/74 (50%)
 Frame = +3

Query: 168 ICNRIYNXXXXXXXXXXXXXNFPQRPISQKPLNLNLKSQXXXXXXXXXXXXXXXXAALDE 347
           ICNRIYN             NF QRPISQK  NLNLK Q                A+ DE
Sbjct: 11  ICNRIYNLSFKHSSLALTC-NFSQRPISQKAFNLNLKFQSFILSPLSLHRLHPPPASTDE 69

Query: 348 FEAAQDGTSSQQDD 389
           FE AQD T S+QD+
Sbjct: 70  FEVAQDSTDSRQDN 83


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