BLASTX nr result

ID: Glycyrrhiza35_contig00005019 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00005019
         (377 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KHG10314.1 hypothetical protein F383_08037 [Gossypium arboreum]        65   1e-10
OAP10973.1 hypothetical protein AXX17_AT2G20690 [Arabidopsis tha...    53   3e-06

>KHG10314.1 hypothetical protein F383_08037 [Gossypium arboreum]
          Length = 192

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
 Frame = -3

Query: 372 WSLRRSVHW-------SLRRRVNWWGRRGIVVRSLWRSVHWSLRRS-------VNWWGRR 235
           W LRR ++W        L R +NWW   G+ +  LWR +HW LR         +NWW R 
Sbjct: 29  WLLRRLINWWFGFWFFFLWRCINWWLWLGLFL--LWRFIHWWLRFKLLFLWWCINWWLRL 86

Query: 234 GIVVRSLWRSVHWRGRGRILVWLLCWRWRRGVVVRSLWWSVHWGRGRRILVXXXXXXXXX 55
            + +  LW  +HW    R+L    C  W   + +  LWW ++W  G R+L          
Sbjct: 87  RLFL--LWWFIHWWLGFRLLFLWWCINWWLRLRLFLLWWFIYWWFGFRLLF--------- 135

Query: 54  XWVMVRSLRRSVHWW 10
                  L R ++WW
Sbjct: 136 -------LWRCINWW 143



 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 33/96 (34%), Positives = 44/96 (45%)
 Frame = -3

Query: 372 WSLRRSVHWSLRRRVNWWGRRGIVVRSLWRSVHWSLRRSVNWWGRRGIVVRSLWRSVHWR 193
           W  R    W LRR +NWW          W    W   R +NWW   G+ +  LWR +HW 
Sbjct: 21  WWFRLINWWLLRRLINWWF-------GFWFFFLW---RCINWWLWLGLFL--LWRFIHWW 68

Query: 192 GRGRILVWLLCWRWRRGVVVRSLWWSVHWGRGRRIL 85
            R ++L    C  W   + +  LWW +HW  G R+L
Sbjct: 69  LRFKLLFLWWCINWWLRLRLFLLWWFIHWWLGFRLL 104


>OAP10973.1 hypothetical protein AXX17_AT2G20690 [Arabidopsis thaliana]
          Length = 156

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 43/123 (34%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
 Frame = -3

Query: 363 RRSVHWSLRRRVNWWGRRGIVVRSLWRSVHWSLRRSVNWWGRRGIVVRSLWRSVHWRGRG 184
           RR V W     V+ W R G+VV    R V W   R V+ W R G+VV    R V W   G
Sbjct: 46  RRRVVWWRWGAVDVWWRWGLVVNLRRRRVVWWWWRVVDVWWRWGLVVNLWRRRVVWWRWG 105

Query: 183 RILVWLLCWRWRRGVVV-----RSLWWSVHWGRGRRILVXXXXXXXXXXWVMVRSLRRSV 19
            + VW   WRW  G+VV     R +WW   WG                  ++V   RR V
Sbjct: 106 AVDVW---WRW--GLVVNLRRRRVVWW--RWG---------AVDVWWRWGLVVNLRRRRV 149

Query: 18  HWW 10
            WW
Sbjct: 150 VWW 152


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