BLASTX nr result
ID: Glycyrrhiza35_contig00003488
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza35_contig00003488
(4483 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_009027274.1 RNA polymerase beta' subunit (chloroplast) [Glycy... 620 0.0
AMC32360.1 RNA polymerase beta'' subunit (chloroplast) [Glycyrrh... 607 0.0
YP_009233395.1 RpoC2 (chloroplast) [Wisteria sinensis] AMB27275.... 601 0.0
YP_009161290.1 RpoC2 (chloroplast) [Wisteria floribunda] AJC1003... 601 0.0
YP_009175761.1 RNA polymerase beta'' subunit (chloroplast) [Astr... 582 e-179
YP_009242955.1 RNA polymerase beta'' subunit (chloroplast) [Astr... 582 e-179
AJE72230.1 RNA polymerase beta'' subunit (plastid) [Oxytropis la... 582 e-179
YP_009334191.1 RpoC2 (chloroplast) [Caragana microphylla] APL973... 580 e-178
AJE71733.1 RNA polymerase beta'' subunit (plastid) [Astragalus c... 579 e-178
AJE72727.1 RNA polymerase beta'' subunit (plastid) [Astragalus c... 579 e-178
AJE71591.1 RNA polymerase beta'' subunit (plastid) [Melilotus of... 578 e-178
YP_002149735.1 RNA polymerase beta' subunit [Cicer arietinum] AC... 572 e-175
YP_009141612.1 RNA polymerase beta' subunit (chloroplast) [Medic... 571 e-175
YP_009327946.1 RNA polymerase beta'' subunit (chloroplast) [Medi... 571 e-175
AJE71946.1 RNA polymerase beta'' subunit (plastid) [Baptisia bra... 570 e-174
P12227.1 RecName: Full=DNA-directed RNA polymerase subunit beta'... 563 e-174
AGV52603.1 RNA polymerase beta'' subunit (chloroplast) [Medicago... 566 e-173
AFR60125.1 RNA polymerase beta'' subunit (plastid) [Medicago tru... 566 e-173
AFR59973.1 RNA polymerase beta'' subunit (plastid) [Medicago tru... 566 e-173
YP_001381726.2 RNA polymerase beta' subunit [Medicago truncatula] 566 e-173
>YP_009027274.1 RNA polymerase beta' subunit (chloroplast) [Glycyrrhiza glabra]
AGU00070.1 RNA polymerase beta' subunit (chloroplast)
[Glycyrrhiza glabra]
Length = 1388
Score = 620 bits (1598), Expect = 0.0
Identities = 314/315 (99%), Positives = 315/315 (100%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG
Sbjct: 1074 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 1133
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF
Sbjct: 1134 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 1193
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG
Sbjct: 1194 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 1253
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1254 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 1313
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 3584
DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEK+NNFFEVEIRNILFHHRKL
Sbjct: 1314 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKQNNFFEVEIRNILFHHRKL 1373
Query: 3583 FDFFISKNLCDTSEI 3539
FDFFISKNLCDTSEI
Sbjct: 1374 FDFFISKNLCDTSEI 1388
>AMC32360.1 RNA polymerase beta'' subunit (chloroplast) [Glycyrrhiza lepidota]
Length = 1388
Score = 607 bits (1566), Expect = 0.0
Identities = 309/315 (98%), Positives = 310/315 (98%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEIL+EG
Sbjct: 1074 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILYEG 1133
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF
Sbjct: 1134 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 1193
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVF PG
Sbjct: 1194 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSPG 1253
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1254 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 1313
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 3584
DWLKGLKENVVLGGMIPVGTGFKRIMH SRSRQ NKITLEKK NFFEVEIRNILFHHRKL
Sbjct: 1314 DWLKGLKENVVLGGMIPVGTGFKRIMHHSRSRQDNKITLEKKKNFFEVEIRNILFHHRKL 1373
Query: 3583 FDFFISKNLCDTSEI 3539
FDFF SKNLCDTSEI
Sbjct: 1374 FDFFNSKNLCDTSEI 1388
>YP_009233395.1 RpoC2 (chloroplast) [Wisteria sinensis] AMB27275.1 RpoC2
(chloroplast) [Wisteria sinensis]
Length = 1367
Score = 601 bits (1550), Expect = 0.0
Identities = 303/312 (97%), Positives = 308/312 (98%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QFICENICIAQTKNGPHLK KSGQV+TVQ+DSVIIRSANPYLATPGATIHGHYGEIL+EG
Sbjct: 1056 QFICENICIAQTKNGPHLKQKSGQVITVQIDSVIIRSANPYLATPGATIHGHYGEILYEG 1115
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF
Sbjct: 1116 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 1175
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG
Sbjct: 1176 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 1235
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1236 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 1295
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 3584
DWLKGLKENVVLGGMIPVGTGF++IMH SRSRQHNKITLEKK N FEVEIRNILFHHRKL
Sbjct: 1296 DWLKGLKENVVLGGMIPVGTGFQKIMHHSRSRQHNKITLEKKKNLFEVEIRNILFHHRKL 1355
Query: 3583 FDFFISKNLCDT 3548
FDFFISKNLCDT
Sbjct: 1356 FDFFISKNLCDT 1367
>YP_009161290.1 RpoC2 (chloroplast) [Wisteria floribunda] AJC10039.1 RpoC2
(chloroplast) [Wisteria floribunda]
Length = 1367
Score = 601 bits (1550), Expect = 0.0
Identities = 303/312 (97%), Positives = 308/312 (98%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QFICENICIAQTKNGPHLK KSGQV+TVQ+DSVIIRSANPYLATPGATIHGHYGEIL+EG
Sbjct: 1056 QFICENICIAQTKNGPHLKQKSGQVITVQIDSVIIRSANPYLATPGATIHGHYGEILYEG 1115
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF
Sbjct: 1116 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 1175
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG
Sbjct: 1176 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 1235
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1236 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 1295
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 3584
DWLKGLKENVVLGGMIPVGTGF++IMH SRSRQHNKITLEKK N FEVEIRNILFHHRKL
Sbjct: 1296 DWLKGLKENVVLGGMIPVGTGFQKIMHHSRSRQHNKITLEKKKNLFEVEIRNILFHHRKL 1355
Query: 3583 FDFFISKNLCDT 3548
FDFFISKNLCDT
Sbjct: 1356 FDFFISKNLCDT 1367
>YP_009175761.1 RNA polymerase beta'' subunit (chloroplast) [Astragalus mongholicus
var. nakaianus] ALH42736.1 RNA polymerase beta'' subunit
(chloroplast) [Astragalus mongholicus var. nakaianus]
ANK78900.1 RNA polymerase beta'' subunit (chloroplast)
[Astragalus membranaceus var. membranaceus]
Length = 1372
Score = 582 bits (1501), Expect = e-179
Identities = 295/304 (97%), Positives = 298/304 (98%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QFICENICIAQTKNGPHLKLKSGQVLTVQ DSVIIRSA PYLATPGATIHGHYGEIL+EG
Sbjct: 1063 QFICENICIAQTKNGPHLKLKSGQVLTVQKDSVIIRSAKPYLATPGATIHGHYGEILYEG 1122
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DILVTFIYEKSRSGDITQGLPKVEQILE+RSIDSISMNLEKRIDAWNECITRILGIPWGF
Sbjct: 1123 DILVTFIYEKSRSGDITQGLPKVEQILEIRSIDSISMNLEKRIDAWNECITRILGIPWGF 1182
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG
Sbjct: 1183 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 1242
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1243 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 1302
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 3584
DWLKGLKENVVLGGMIPVGTGFKRIMHRSRS Q NKITLEKK N FEVEIRN+LFHHRKL
Sbjct: 1303 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSGQQNKITLEKKKNLFEVEIRNLLFHHRKL 1362
Query: 3583 FDFF 3572
FDFF
Sbjct: 1363 FDFF 1366
>YP_009242955.1 RNA polymerase beta'' subunit (chloroplast) [Astragalus mongholicus]
AMQ99218.1 RNA polymerase beta'' subunit (chloroplast)
[Astragalus mongholicus]
Length = 1376
Score = 582 bits (1501), Expect = e-179
Identities = 295/304 (97%), Positives = 298/304 (98%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QFICENICIAQTKNGPHLKLKSGQVLTVQ DSVIIRSA PYLATPGATIHGHYGEIL+EG
Sbjct: 1067 QFICENICIAQTKNGPHLKLKSGQVLTVQKDSVIIRSAKPYLATPGATIHGHYGEILYEG 1126
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DILVTFIYEKSRSGDITQGLPKVEQILE+RSIDSISMNLEKRIDAWNECITRILGIPWGF
Sbjct: 1127 DILVTFIYEKSRSGDITQGLPKVEQILEIRSIDSISMNLEKRIDAWNECITRILGIPWGF 1186
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG
Sbjct: 1187 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 1246
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1247 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 1306
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 3584
DWLKGLKENVVLGGMIPVGTGFKRIMHRSRS Q NKITLEKK N FEVEIRN+LFHHRKL
Sbjct: 1307 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSGQQNKITLEKKKNLFEVEIRNLLFHHRKL 1366
Query: 3583 FDFF 3572
FDFF
Sbjct: 1367 FDFF 1370
>AJE72230.1 RNA polymerase beta'' subunit (plastid) [Oxytropis lambertii]
Length = 1368
Score = 582 bits (1499), Expect = e-179
Identities = 294/304 (96%), Positives = 298/304 (98%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QF+CENICIAQTKNGPHLKLKSGQVLTVQ DSVIIRSANPYLATPGATIHGHYGEIL+EG
Sbjct: 1059 QFLCENICIAQTKNGPHLKLKSGQVLTVQKDSVIIRSANPYLATPGATIHGHYGEILYEG 1118
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DILVTFIYEKSRSGDITQGLPKVEQILE+RSIDSISMNLEKRIDAWNECITRILGIPWGF
Sbjct: 1119 DILVTFIYEKSRSGDITQGLPKVEQILEIRSIDSISMNLEKRIDAWNECITRILGIPWGF 1178
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG
Sbjct: 1179 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 1238
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1239 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 1298
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 3584
DWLKGLKENVVLGGMIPVGTGFKRI HRSRS Q NKITLEKK N FEVEIRN+LFHHRKL
Sbjct: 1299 DWLKGLKENVVLGGMIPVGTGFKRITHRSRSGQQNKITLEKKKNLFEVEIRNLLFHHRKL 1358
Query: 3583 FDFF 3572
FDFF
Sbjct: 1359 FDFF 1362
>YP_009334191.1 RpoC2 (chloroplast) [Caragana microphylla] APL97397.1 RpoC2
(chloroplast) [Caragana microphylla]
Length = 1372
Score = 580 bits (1495), Expect = e-178
Identities = 292/300 (97%), Positives = 297/300 (99%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEIL+EG
Sbjct: 1072 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILYEG 1131
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DI VTFIYEKSRSGDITQGLPKVEQILE+RSIDSISMNLEKRIDAWNECITRILGIPWGF
Sbjct: 1132 DIFVTFIYEKSRSGDITQGLPKVEQILEIRSIDSISMNLEKRIDAWNECITRILGIPWGF 1191
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG
Sbjct: 1192 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 1251
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1252 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 1311
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 3584
DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKK N FEVEIRN+LFHH+K+
Sbjct: 1312 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKKNLFEVEIRNLLFHHKKI 1371
>AJE71733.1 RNA polymerase beta'' subunit (plastid) [Astragalus canadensis]
Length = 1372
Score = 579 bits (1493), Expect = e-178
Identities = 292/304 (96%), Positives = 298/304 (98%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QFICENICIAQTKNGPHLKLKSGQVLTVQ DS+IIRSA PYLATPGATIHGHYGEIL+EG
Sbjct: 1063 QFICENICIAQTKNGPHLKLKSGQVLTVQKDSLIIRSAKPYLATPGATIHGHYGEILYEG 1122
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DILVTFIYEKSRSGDITQGLPKVEQILE+RSIDSISMNLEKRIDAWNEC+TRILGIPWGF
Sbjct: 1123 DILVTFIYEKSRSGDITQGLPKVEQILEIRSIDSISMNLEKRIDAWNECVTRILGIPWGF 1182
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG
Sbjct: 1183 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 1242
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1243 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 1302
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 3584
DWLKGLKENVVLGGMIPVGTGFKRIMHRSRS Q NKI+LEKK N FEVEIRN+LFHHRKL
Sbjct: 1303 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSGQQNKISLEKKKNLFEVEIRNLLFHHRKL 1362
Query: 3583 FDFF 3572
FDFF
Sbjct: 1363 FDFF 1366
>AJE72727.1 RNA polymerase beta'' subunit (plastid) [Astragalus crassicarpus]
Length = 1374
Score = 579 bits (1492), Expect = e-178
Identities = 292/304 (96%), Positives = 297/304 (97%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QFICENICIAQTKNGPH KLKSGQVLTVQ DSVIIRSA PYLATPGATIHGHYGEIL+EG
Sbjct: 1065 QFICENICIAQTKNGPHFKLKSGQVLTVQKDSVIIRSAKPYLATPGATIHGHYGEILYEG 1124
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DILVTFIYEKSRSGDITQGLPKVE+ILE+RSIDSISMNLEKRIDAWNECITRILGIPWGF
Sbjct: 1125 DILVTFIYEKSRSGDITQGLPKVEKILEIRSIDSISMNLEKRIDAWNECITRILGIPWGF 1184
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG
Sbjct: 1185 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 1244
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEA+CYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1245 ELIGLLRAERTGRALEEAVCYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 1304
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 3584
DWLKGLKENVVLGGMIPVGTGFKRIMHRSRS Q NKITLEKK N FEVEIRN+LFHHRKL
Sbjct: 1305 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSGQQNKITLEKKKNLFEVEIRNLLFHHRKL 1364
Query: 3583 FDFF 3572
FDFF
Sbjct: 1365 FDFF 1368
>AJE71591.1 RNA polymerase beta'' subunit (plastid) [Melilotus officinalis]
AJE71662.1 RNA polymerase beta'' subunit (plastid)
[Melilotus albus]
Length = 1376
Score = 578 bits (1490), Expect = e-178
Identities = 293/304 (96%), Positives = 299/304 (98%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QFICENICIAQ KNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEIL++G
Sbjct: 1068 QFICENICIAQMKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILYQG 1127
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DILVTFIYEKSRSGDITQGLPKVEQILE+RS+DSISMNLEKRIDAWNECITRILGIPWGF
Sbjct: 1128 DILVTFIYEKSRSGDITQGLPKVEQILEIRSVDSISMNLEKRIDAWNECITRILGIPWGF 1187
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG
Sbjct: 1188 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 1247
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1248 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 1307
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 3584
DWLKGLKENVVLGGMIPVGTGFKRI+HR RSRQHNKITLEKK FEVEIRN+LFHHRKL
Sbjct: 1308 DWLKGLKENVVLGGMIPVGTGFKRIIHRLRSRQHNKITLEKK-KLFEVEIRNLLFHHRKL 1366
Query: 3583 FDFF 3572
FDFF
Sbjct: 1367 FDFF 1370
>YP_002149735.1 RNA polymerase beta' subunit [Cicer arietinum] ACH41072.1 RNA
polymerase beta' subunit (chloroplast) [Cicer arietinum]
Length = 1376
Score = 572 bits (1475), Expect = e-175
Identities = 290/304 (95%), Positives = 295/304 (97%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QFICENICI Q KN PHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEIL EG
Sbjct: 1067 QFICENICITQKKNEPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILDEG 1126
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DILVTFIYEKSRSGDITQGLPKVEQILE+RSIDSISMNLEKRIDAWNECI RILGIPWGF
Sbjct: 1127 DILVTFIYEKSRSGDITQGLPKVEQILEIRSIDSISMNLEKRIDAWNECIPRILGIPWGF 1186
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG
Sbjct: 1187 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 1246
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1247 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 1306
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 3584
DWLKGLKENVVLGG+IPVGTGFKRIMHRSRSRQHNKITL+KK FEVEIRN+L HHRKL
Sbjct: 1307 DWLKGLKENVVLGGIIPVGTGFKRIMHRSRSRQHNKITLKKKKKLFEVEIRNLLLHHRKL 1366
Query: 3583 FDFF 3572
FDF+
Sbjct: 1367 FDFY 1370
>YP_009141612.1 RNA polymerase beta' subunit (chloroplast) [Medicago hybrida]
YP_009141687.1 RNA polymerase beta' subunit (chloroplast)
[Medicago papillosa] AIL56137.1 RNA polymerase beta'
subunit (chloroplast) [Medicago hybrida] AIL56212.1 RNA
polymerase beta' subunit (chloroplast) [Medicago
papillosa] AMC32363.1 RNA polymerase beta'' subunit
(chloroplast) [Medicago sativa] ANS57907.1 RNA polymerase
beta' subunit (chloroplast) [Medicago sativa]
Length = 1370
Score = 571 bits (1471), Expect = e-175
Identities = 290/304 (95%), Positives = 298/304 (98%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QFICENICIA+ KNGPHLKLKSGQV+TVQMDSVIIRSANPYLATPGATIHGHYGEIL++G
Sbjct: 1065 QFICENICIAKMKNGPHLKLKSGQVITVQMDSVIIRSANPYLATPGATIHGHYGEILYQG 1124
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DILVTFIYEKSRSGDITQGLPKVEQILE+RSIDSISMNLEKRIDAWNECITRILGIPWGF
Sbjct: 1125 DILVTFIYEKSRSGDITQGLPKVEQILEIRSIDSISMNLEKRIDAWNECITRILGIPWGF 1184
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG
Sbjct: 1185 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 1244
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1245 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 1304
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 3584
DWLKGLKENVVLGGMIPVGTGFKRIMHRSRS Q+NKITL+KK FEVEIRN+LFHHRKL
Sbjct: 1305 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSTQYNKITLKKK-KLFEVEIRNLLFHHRKL 1363
Query: 3583 FDFF 3572
FD F
Sbjct: 1364 FDSF 1367
>YP_009327946.1 RNA polymerase beta'' subunit (chloroplast) [Medicago falcata]
AOG66214.1 RNA polymerase beta'' subunit (chloroplast)
[Medicago sativa] APC60490.1 RNA polymerase beta''
subunit (chloroplast) [Medicago falcata]
Length = 1374
Score = 571 bits (1471), Expect = e-175
Identities = 290/304 (95%), Positives = 298/304 (98%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QFICENICIA+ KNGPHLKLKSGQV+TVQMDSVIIRSANPYLATPGATIHGHYGEIL++G
Sbjct: 1069 QFICENICIAKMKNGPHLKLKSGQVITVQMDSVIIRSANPYLATPGATIHGHYGEILYQG 1128
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DILVTFIYEKSRSGDITQGLPKVEQILE+RSIDSISMNLEKRIDAWNECITRILGIPWGF
Sbjct: 1129 DILVTFIYEKSRSGDITQGLPKVEQILEIRSIDSISMNLEKRIDAWNECITRILGIPWGF 1188
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG
Sbjct: 1189 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 1248
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1249 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 1308
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 3584
DWLKGLKENVVLGGMIPVGTGFKRIMHRSRS Q+NKITL+KK FEVEIRN+LFHHRKL
Sbjct: 1309 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSTQYNKITLKKK-KLFEVEIRNLLFHHRKL 1367
Query: 3583 FDFF 3572
FD F
Sbjct: 1368 FDSF 1371
>AJE71946.1 RNA polymerase beta'' subunit (plastid) [Baptisia bracteata]
AJE72372.1 RNA polymerase beta'' subunit (plastid)
[Baptisia alba]
Length = 1383
Score = 570 bits (1468), Expect = e-174
Identities = 290/315 (92%), Positives = 304/315 (96%), Gaps = 1/315 (0%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QF+CEN+CIAQTKNGPHLK SGQVLTVQ+DSV+IRSANPYLATPGAT+HGHYGEIL+EG
Sbjct: 1073 QFLCENVCIAQTKNGPHLK--SGQVLTVQIDSVVIRSANPYLATPGATVHGHYGEILYEG 1130
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DILVTFIYEKSRSGDITQGLPKVEQ+LEVRSIDSISMNLEK++D WNE ITRILGIPWGF
Sbjct: 1131 DILVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKKVDTWNERITRILGIPWGF 1190
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTI QSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVF PG
Sbjct: 1191 LIGAELTIVQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFSPG 1250
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEAICYRA+LLGITKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1251 ELIGLLRAERTGRALEEAICYRAILLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 1310
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLE-KKNNFFEVEIRNILFHHRK 3587
DWLKGLKENVVLGGMIPVGTGFKRIMH RSRQHNKITLE KKNN FE E+R+ILFHHR+
Sbjct: 1311 DWLKGLKENVVLGGMIPVGTGFKRIMH--RSRQHNKITLETKKNNVFEGEMRDILFHHRE 1368
Query: 3586 LFDFFISKNLCDTSE 3542
+FDFFISKNLCDTSE
Sbjct: 1369 VFDFFISKNLCDTSE 1383
>P12227.1 RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta''; Short=RNA polymerase subunit beta''
CAA27545.1 unnamed protein product, partial (chloroplast)
[Pisum sativum]
Length = 1163
Score = 563 bits (1450), Expect = e-174
Identities = 285/303 (94%), Positives = 294/303 (97%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QFICENICIAQ KN PHLKLKSGQV+ VQMDSVIIRSANPYLATPGATIHGHYGEIL +G
Sbjct: 856 QFICENICIAQMKNRPHLKLKSGQVIIVQMDSVIIRSANPYLATPGATIHGHYGEILSQG 915
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DILVTFIYEKSRSGDITQGLPKVEQILE+RSIDSISMNLEKRIDAWNECIT+I+GIPWGF
Sbjct: 916 DILVTFIYEKSRSGDITQGLPKVEQILEIRSIDSISMNLEKRIDAWNECITKIIGIPWGF 975
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSN+FLPG
Sbjct: 976 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNIFLPG 1035
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEAICYRALLLG+TKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1036 ELIGLLRAERTGRALEEAICYRALLLGVTKTSLNTQSFISEASFQETARVLAKAALRGRI 1095
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 3584
DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKIT +KK FEVEIRN+LFHHRKL
Sbjct: 1096 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITRKKK--LFEVEIRNLLFHHRKL 1153
Query: 3583 FDF 3575
DF
Sbjct: 1154 LDF 1156
>AGV52603.1 RNA polymerase beta'' subunit (chloroplast) [Medicago truncatula f.
tricycla]
Length = 1370
Score = 566 bits (1459), Expect = e-173
Identities = 288/304 (94%), Positives = 296/304 (97%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QFICENICIA+ KNGPHLKLKSGQV+TVQMDSVIIRSANPYLATP ATIHGHYGEIL++G
Sbjct: 1065 QFICENICIAKMKNGPHLKLKSGQVITVQMDSVIIRSANPYLATPEATIHGHYGEILYQG 1124
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DILVTFIYEKSRSGDITQGLPKVE+ILE+RSIDSISMNLEKRIDAWNECITRILGIPWGF
Sbjct: 1125 DILVTFIYEKSRSGDITQGLPKVERILEIRSIDSISMNLEKRIDAWNECITRILGIPWGF 1184
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG
Sbjct: 1185 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 1244
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1245 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 1304
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 3584
DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQ+NKITL KK FEVEIRN+LFHHR L
Sbjct: 1305 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQYNKITL-KKEKLFEVEIRNLLFHHRNL 1363
Query: 3583 FDFF 3572
FD F
Sbjct: 1364 FDSF 1367
>AFR60125.1 RNA polymerase beta'' subunit (plastid) [Medicago truncatula]
Length = 1370
Score = 566 bits (1458), Expect = e-173
Identities = 288/304 (94%), Positives = 296/304 (97%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QFICENICIA+ KNGPHLKLKSGQV+TVQMDSVIIRSANPYLATP ATIHGHYGEIL++G
Sbjct: 1065 QFICENICIAKMKNGPHLKLKSGQVITVQMDSVIIRSANPYLATPEATIHGHYGEILYQG 1124
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DILVTFIYEKSRS DITQGLPKVEQILE+RSIDSISMNLEKRIDAWNECITRILGIPWGF
Sbjct: 1125 DILVTFIYEKSRSSDITQGLPKVEQILEIRSIDSISMNLEKRIDAWNECITRILGIPWGF 1184
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG
Sbjct: 1185 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 1244
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1245 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 1304
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 3584
DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQ+NKITL+KK FEVEIRN+LFHHR L
Sbjct: 1305 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQYNKITLKKK-KLFEVEIRNLLFHHRNL 1363
Query: 3583 FDFF 3572
FD F
Sbjct: 1364 FDSF 1367
>AFR59973.1 RNA polymerase beta'' subunit (plastid) [Medicago truncatula]
AFR60049.1 RNA polymerase beta'' subunit (plastid)
[Medicago truncatula]
Length = 1370
Score = 566 bits (1458), Expect = e-173
Identities = 288/304 (94%), Positives = 296/304 (97%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QFICENICIA+ KNGPHLKLKSGQV+TVQMDSVIIRSANPYLATP ATIHGHYGEIL++G
Sbjct: 1065 QFICENICIAKMKNGPHLKLKSGQVITVQMDSVIIRSANPYLATPEATIHGHYGEILYQG 1124
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DILVTFIYEKSRS DITQGLPKVEQILE+RSIDSISMNLEKRIDAWNECITRILGIPWGF
Sbjct: 1125 DILVTFIYEKSRSSDITQGLPKVEQILEIRSIDSISMNLEKRIDAWNECITRILGIPWGF 1184
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG
Sbjct: 1185 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 1244
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1245 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 1304
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 3584
DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQ+NKITL+KK FEVEIRN+LFHHR L
Sbjct: 1305 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQYNKITLKKK-KLFEVEIRNLLFHHRNL 1363
Query: 3583 FDFF 3572
FD F
Sbjct: 1364 FDSF 1367
>YP_001381726.2 RNA polymerase beta' subunit [Medicago truncatula]
Length = 1374
Score = 566 bits (1458), Expect = e-173
Identities = 288/304 (94%), Positives = 296/304 (97%)
Frame = -1
Query: 4483 QFICENICIAQTKNGPHLKLKSGQVLTVQMDSVIIRSANPYLATPGATIHGHYGEILFEG 4304
QFICENICIA+ KNGPHLKLKSGQV+TVQMDSVIIRSANPYLATP ATIHGHYGEIL++G
Sbjct: 1069 QFICENICIAKMKNGPHLKLKSGQVITVQMDSVIIRSANPYLATPEATIHGHYGEILYQG 1128
Query: 4303 DILVTFIYEKSRSGDITQGLPKVEQILEVRSIDSISMNLEKRIDAWNECITRILGIPWGF 4124
DILVTFIYEKSRS DITQGLPKVEQILE+RSIDSISMNLEKRIDAWNECITRILGIPWGF
Sbjct: 1129 DILVTFIYEKSRSSDITQGLPKVEQILEIRSIDSISMNLEKRIDAWNECITRILGIPWGF 1188
Query: 4123 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 3944
LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG
Sbjct: 1189 LIGAELTIAQSRISLVNKIQKVYRSQGVHIHNRHIEIIVRQITSKVLVSEDGMSNVFLPG 1248
Query: 3943 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 3764
ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI
Sbjct: 1249 ELIGLLRAERTGRALEEAICYRALLLGITKTSLNTQSFISEASFQETARVLAKAALRGRI 1308
Query: 3763 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQHNKITLEKKNNFFEVEIRNILFHHRKL 3584
DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQ+NKITL+KK FEVEIRN+LFHHR L
Sbjct: 1309 DWLKGLKENVVLGGMIPVGTGFKRIMHRSRSRQYNKITLKKK-KLFEVEIRNLLFHHRNL 1367
Query: 3583 FDFF 3572
FD F
Sbjct: 1368 FDSF 1371