BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00030120
         (323 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP77525.1 Retrovirus-related Pol polyprotein LINE-1, partial [C...    44   1e-07
KYP34423.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca...    48   2e-06
KYP48577.1 hypothetical protein KK1_029728, partial [Cajanus cajan]    48   2e-06
KYP70258.1 hypothetical protein KK1_009469, partial [Cajanus cajan]    48   2e-06
KYP53622.1 hypothetical protein KK1_024517, partial [Cajanus cajan]    47   6e-06

>KYP77525.1 Retrovirus-related Pol polyprotein LINE-1, partial [Cajanus cajan]
          Length = 366

 Score = 43.9 bits (102), Expect(3) = 1e-07
 Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
 Frame = -1

Query: 290 ML*CISGHTR*DRMMNE-LER*LGMALVVEKMVGFLLRWFAHMWRR 156
           ML  +SGHTR DR+ N+ +   +G+A +VEK+V   LRWF H+ RR
Sbjct: 259 MLRWMSGHTRMDRIRNDYIREKVGVAPIVEKLVETRLRWFGHVQRR 304



 Score = 36.2 bits (82), Expect(3) = 1e-07
 Identities = 18/37 (48%), Positives = 26/37 (70%)
 Frame = -3

Query: 141 VKRVDQMDGSPIVRGRESFGKIIGQTNEKDLDMNGLS 31
           V+RVDQM+ + I RGR    K IG+T ++DL +N L+
Sbjct: 310 VRRVDQMEDNLITRGRGRPKKTIGETIKRDLAINNLT 346



 Score = 21.9 bits (45), Expect(3) = 1e-07
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -2

Query: 322 EFNVAEMRMTR 290
           +FNVAEMRM R
Sbjct: 251 KFNVAEMRMLR 261


>KYP34423.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
          Length = 819

 Score = 47.8 bits (112), Expect(2) = 2e-06
 Identities = 24/46 (52%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
 Frame = -1

Query: 290 ML*CISGHTR*DRMMNE-LER*LGMALVVEKMVGFLLRWFAHMWRR 156
           ML  + GHT  DR+ NE +   +G+AL+VEK+V   LRWF H+WRR
Sbjct: 712 MLRWMCGHTIKDRIRNECIRESVGVALIVEKLVESRLRWFGHVWRR 757



 Score = 31.2 bits (69), Expect(2) = 2e-06
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = -3

Query: 141 VKRVDQMDGSPIVRGRESFGKIIGQTNEKDLDMNGLS 31
           V+RVD+M+ +   R R    K IG+T  KD+++N LS
Sbjct: 763 VRRVDEMEATVGARRRGRPRKTIGETVLKDMEINALS 799


>KYP48577.1 hypothetical protein KK1_029728, partial [Cajanus cajan]
          Length = 174

 Score = 47.8 bits (112), Expect(2) = 2e-06
 Identities = 24/46 (52%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
 Frame = -1

Query: 290 ML*CISGHTR*DRMMNE-LER*LGMALVVEKMVGFLLRWFAHMWRR 156
           ML  + GHT  DR+ NE +   +G+AL+VEK+V   LRWF H+WRR
Sbjct: 67  MLRWMCGHTIKDRIRNECIRESVGVALIVEKLVESRLRWFGHVWRR 112



 Score = 31.2 bits (69), Expect(2) = 2e-06
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = -3

Query: 141 VKRVDQMDGSPIVRGRESFGKIIGQTNEKDLDMNGLS 31
           V+RVD+M+ +   R R    K IG+T  KD+++N LS
Sbjct: 118 VRRVDEMEATVGARRRGRPRKTIGETVLKDMEINALS 154


>KYP70258.1 hypothetical protein KK1_009469, partial [Cajanus cajan]
          Length = 109

 Score = 47.8 bits (112), Expect(2) = 2e-06
 Identities = 24/46 (52%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
 Frame = -1

Query: 290 ML*CISGHTR*DRMMNE-LER*LGMALVVEKMVGFLLRWFAHMWRR 156
           ML  + GHT  DR+ NE +   +G+AL+VEK+V   LRWF H+WRR
Sbjct: 2   MLRWMCGHTIKDRIRNECIRESVGVALIVEKLVESRLRWFGHVWRR 47



 Score = 31.2 bits (69), Expect(2) = 2e-06
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = -3

Query: 141 VKRVDQMDGSPIVRGRESFGKIIGQTNEKDLDMNGLS 31
           V+RVD+M+ +   R R    K IG+T  KD+++N LS
Sbjct: 53  VRRVDEMEATVGARRRGRPRKTIGETVLKDIEINALS 89


>KYP53622.1 hypothetical protein KK1_024517, partial [Cajanus cajan]
          Length = 102

 Score = 47.4 bits (111), Expect(2) = 6e-06
 Identities = 22/40 (55%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
 Frame = -1

Query: 272 GHTR*DRMMNE-LER*LGMALVVEKMVGFLLRWFAHMWRR 156
           GHT  DR+ NE +   +G+A +VEK+V F LRWF H+WRR
Sbjct: 1   GHTIKDRIRNECIRESVGVASIVEKLVEFRLRWFGHVWRR 40



 Score = 30.0 bits (66), Expect(2) = 6e-06
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = -3

Query: 141 VKRVDQMDGSPIVRGRESFGKIIGQTNEKDLDMNGLS 31
           V+RVD+M+ +   R R    K IG+T  KD+++N LS
Sbjct: 46  VRRVDEMEVTVGARRRGRPRKTIGETVLKDIEINALS 82