BLASTX nr result
ID: Glycyrrhiza34_contig00028546
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza34_contig00028546
(335 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP66486.1 Retrovirus-related Pol polyprotein from transposon TN... 91 7e-19
OMO59210.1 Integrase, catalytic core [Corchorus capsularis] 89 3e-18
XP_012075359.1 PREDICTED: uncharacterized protein LOC105636646 [... 86 2e-17
CAN63293.1 hypothetical protein VITISV_025722 [Vitis vinifera] 78 8e-15
CAN70827.1 hypothetical protein VITISV_029099 [Vitis vinifera] 74 4e-13
KYP31853.1 Retrovirus-related Pol polyprotein from transposon TN... 72 1e-12
AAV88069.1 hypothetical retrotransposon [Ipomoea batatas] 72 1e-12
KYP64043.1 Retrovirus-related Pol polyprotein from transposon TN... 72 2e-12
KYP38667.1 Retrovirus-related Pol polyprotein from transposon TN... 71 4e-12
CAN77158.1 hypothetical protein VITISV_019025 [Vitis vinifera] 69 2e-11
XP_019706781.1 PREDICTED: uncharacterized protein LOC109505995 [... 69 2e-11
CAN74160.1 hypothetical protein VITISV_018405 [Vitis vinifera] 69 2e-11
CAN66323.1 hypothetical protein VITISV_007384 [Vitis vinifera] 69 2e-11
CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera] 69 2e-11
KYP40209.1 Retrovirus-related Pol polyprotein from transposon TN... 65 1e-10
CAN64589.1 hypothetical protein VITISV_008453 [Vitis vinifera] 67 1e-10
CAN61851.1 hypothetical protein VITISV_036278, partial [Vitis vi... 67 1e-10
BAA11674.1 unnamed protein product [Nicotiana tabacum] 67 1e-10
CAN81755.1 hypothetical protein VITISV_020922 [Vitis vinifera] 66 1e-10
CAN75500.1 hypothetical protein VITISV_034155 [Vitis vinifera] 66 2e-10
>KYP66486.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1321
Score = 90.5 bits (223), Expect = 7e-19
Identities = 45/112 (40%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Frame = -2
Query: 334 RSKSRGRFNKS-KDRSQSQPRRKFKCYHCGEEGHIKRNCKAWKNREKKDRRNQISDKDEN 158
RS+S+ R + +D S+S+ RR CY+CG+ GH+K+NC+ K +E +D+ NQ +D++
Sbjct: 203 RSRSKSRTPRGHRDHSKSRERRS--CYNCGKPGHLKKNCRFLK-KEIQDK-NQANDRNTA 258
Query: 157 TTTPVIDGXXXXXXXXXXECHVADSCVEWVVDSATSYHATPNKEFFTTYKVG 2
TT D CH+A+ EW++DSA SYH P +E+FTTY+ G
Sbjct: 259 ATTSASDDEITLLCNQGECCHIAEPDEEWIIDSAASYHCVPKREYFTTYRKG 310
>OMO59210.1 Integrase, catalytic core [Corchorus capsularis]
Length = 855
Score = 88.6 bits (218), Expect = 3e-18
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Frame = -2
Query: 334 RSKSRGRFNKSKDRSQSQPRRKFKCYHCGEEGHIKRNCKAWKNREKKDRRNQISDKDENT 155
R K +G +SK +++S+ R K HCG+ GH+KRNCK K K + + S+++ N
Sbjct: 57 REKVQGFRGRSKSKNRSKSRDPVKRNHCGKVGHLKRNCKLLKQERKDGKSKKNSEEESNV 116
Query: 154 TTPVIDGXXXXXXXXXXEC-HVADSCVEWVVDSATSYHATPNKEFFTTYKVG 2
T V D +C HV D EW+VD+ +YH P +E FTTYK G
Sbjct: 117 TVVVSDEETVSLICGHGDCNHVTDPSNEWIVDTGATYHCVPKRELFTTYKAG 168
>XP_012075359.1 PREDICTED: uncharacterized protein LOC105636646 [Jatropha curcas]
Length = 1180
Score = 86.3 bits (212), Expect = 2e-17
Identities = 50/112 (44%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Frame = -2
Query: 334 RSKSRG-RFNKSKDRSQSQPRRKFKCYHCGEEGHIKRNCKAWKNREKKDRRNQISDKDEN 158
+SKSRG R KS RS+S+ RK CYHCG+E H+KRNC K ++ DRR + +D++ +
Sbjct: 647 QSKSRGPRHVKSGGRSKSREMRK--CYHCGKEAHLKRNCHLLK-QDNADRRQE-NDRNIS 702
Query: 157 TTTPVIDGXXXXXXXXXXECHVADSCVEWVVDSATSYHATPNKEFFTTYKVG 2
T DG CHV D+ EW+VDS SYH K+ +TYKVG
Sbjct: 703 ATVSREDGEVTLVTHDADCCHVGDADTEWIVDSGASYHCVKKKK-ISTYKVG 753
>CAN63293.1 hypothetical protein VITISV_025722 [Vitis vinifera]
Length = 347
Score = 78.2 bits (191), Expect = 8e-15
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Frame = -2
Query: 334 RSKSRGRFNKSKDRSQSQPRRKFKCYHCGEEGHIKRNCKAWKNREKKDRRNQISDKDENT 155
R+K R + +K RS+S+ R+ +CY CG++GH+KR+C K R + S K N
Sbjct: 99 RNKFRSESSNNKSRSKSKKRKDIQCYKCGKKGHMKRDCPEKKKRGSVSENKEGSSKSANV 158
Query: 154 TT--PVIDGXXXXXXXXXXECHVADSCVEWVVDSATSYHATPNKEFFTTYK 8
T G H+ DS W++DS SYH TPNK++F TY+
Sbjct: 159 VTEEDSESGDGDMLSVSSSSDHLTDS---WILDSTCSYHMTPNKDWFNTYR 206
>CAN70827.1 hypothetical protein VITISV_029099 [Vitis vinifera]
Length = 649
Score = 73.9 bits (180), Expect = 4e-13
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Frame = -2
Query: 334 RSKSRGRFNKSKDRSQSQPRRKFKCYHCGEEGHIKRNCKA----WKNREKKDRRNQISDK 167
RSKSRG NK + +S++ +C++C +GHI++ C+ K R+ K+++N S +
Sbjct: 159 RSKSRGPKNKDRSKSKTNKFVNVECHYCHLKGHIRKYCRQLKRNMKQRKVKNKKNDNSGE 218
Query: 166 DENTTTPVIDGXXXXXXXXXXECHVADSCVE--WVVDSATSYHATPNKEFFTTYKVG 2
D+ T + D V SC E WV+DS S HATP K+FFT+Y G
Sbjct: 219 DDRVATTISDFLIVYDSDV-----VNFSCQETSWVIDSGASIHATPRKDFFTSYTSG 270
>KYP31853.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1314
Score = 72.4 bits (176), Expect = 1e-12
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Frame = -2
Query: 334 RSKSRGRFNKSKDRSQSQPRRKFKCYHCGEEGHIKRNCKAWKNREK-----KDRRNQISD 170
RSK+R + + K + +S+ R + CY+CG+ GH K C+ K ++ D+ +
Sbjct: 198 RSKNREKGGRGKSQGRSKSRTRICCYYCGKPGHRKSECRFLKKDQQAGTVHPDQIDPRKK 257
Query: 169 KDENTTTPVIDGXXXXXXXXXXECHVADSCVEWVVDSATSYHATPNKEFFTTYKVG 2
K++ TTT V D C+ W++DS S+H TP++EFF++Y+ G
Sbjct: 258 KEDGTTTAVTSDDVFLVGEENYLNIAFDECI-WIIDSGASFHVTPHEEFFSSYQKG 312
>AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 72.4 bits (176), Expect = 1e-12
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Frame = -2
Query: 334 RSKSRGRFNKSKDRSQSQPRRK-FKCYHCGEEGHIKRNCKAWKNREKKDRRNQISDKDEN 158
R+K +G+ + K RS+S+ R K +C++CG++ HIK+ WK +K+D N+ D
Sbjct: 206 RNKQKGQRGRDKSRSKSRSRYKDIECHYCGKKSHIKKYSFKWKREKKQD--NKDGDTGNQ 263
Query: 157 TTTPVIDGXXXXXXXXXXECHVADSCVEWVVDSATSYHATPNKEFFTTYKVG 2
T D +VA W+VDS +YH TP KEFFT+Y G
Sbjct: 264 VATVRAD---LLVACDDNVINVACHETTWIVDSGAAYHVTPRKEFFTSYTPG 312
>KYP64043.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 336
Score = 71.6 bits (174), Expect = 2e-12
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = -2
Query: 310 NKSKDRSQSQPRRKFKCYHCGEEGHIKRNCKAWKNREKKDR-RNQISDKDENTTTPVIDG 134
N++K + +S R+ KC++C + GH+ + CK K + + + +++ DK + TTT V +G
Sbjct: 210 NRNKLKGKSMTRKDIKCFYCNKMGHLMKECKFLKRDKSRVKGKDKKEDKAKGTTTIVSNG 269
Query: 133 XXXXXXXXXXECHVADSCVEWVVDSATSYHATPNKEFFTTYKVG 2
++A EWV+D ATS+H TP E+FT+Y VG
Sbjct: 270 EVVIVYDDNSI-NLACQVYEWVIDFATSFHVTPYCEYFTSYNVG 312
>KYP38667.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 603
Score = 71.2 bits (173), Expect = 4e-12
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Frame = -2
Query: 331 SKSRGRFNK-----SKDRSQSQPRRKFK---CYHCGEEGHIKRNCKAWKNREK-KDRRNQ 179
+++RGR K S+++S+S+ + ++K CY+C + GHI++NC WK K K + +
Sbjct: 200 TENRGRSQKKELKGSREKSRSKSKSRYKNVECYYCNKPGHIQKNCFLWKKENKGKKGKQK 259
Query: 178 ISDKDENTTTPVIDGXXXXXXXXXXECHVADSCVEWVVDSATSYHATPNKEFFTTYKVG 2
D D++ G V+D + W++DS + H TP KEFFT+Y G
Sbjct: 260 EKDHDDDRVATATCGDLVILSDHGLINLVSDESM-WIIDSGATLHVTPRKEFFTSYTSG 317
>CAN77158.1 hypothetical protein VITISV_019025 [Vitis vinifera]
Length = 788
Score = 69.3 bits (168), Expect = 2e-11
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Frame = -2
Query: 334 RSKSR---GRFNKSKDRSQSQPRRKFKCYHCGEEGHIKRNCKAWKNREKKDRRNQISDKD 164
RSKSR +N K R +S+ ++ KC +C + GHIKR C+ +K RE+ R+ + D
Sbjct: 73 RSKSRKPSSDYNCDKSRGKSKSQKDIKCLYCDKPGHIKRECRKFK-REQFKRKGEEQKDD 131
Query: 163 ENTTTPVIDGXXXXXXXXXXECHVADSCVEWVVDSATSYHATPNKEFFTTYKVG 2
++ +G ++A WVVD+ TS+H T ++FF++Y G
Sbjct: 132 KDIAAVASNGDTINIVCDDACVNLACQDSTWVVDTTTSFHITARRDFFSSYTSG 185
>XP_019706781.1 PREDICTED: uncharacterized protein LOC109505995 [Elaeis guineensis]
Length = 341
Score = 68.9 bits (167), Expect = 2e-11
Identities = 34/111 (30%), Positives = 53/111 (47%)
Frame = -2
Query: 334 RSKSRGRFNKSKDRSQSQPRRKFKCYHCGEEGHIKRNCKAWKNREKKDRRNQISDKDENT 155
RS ++ + +K+R +SQ R+ KCYHCG+ G+ K + K ++R + DK + T
Sbjct: 228 RSNNKAPQHHNKNRGRSQGRKNIKCYHCGKIGYYKNEYRKLKRENLRERDEEKDDKKKGT 287
Query: 154 TTPVIDGXXXXXXXXXXECHVADSCVEWVVDSATSYHATPNKEFFTTYKVG 2
D + + W+VDS SYH T +FFT+Y G
Sbjct: 288 AAAASDSDVFIVCDDGYVNLICQDSI-WIVDSTASYHVTSRYDFFTSYVKG 337
>CAN74160.1 hypothetical protein VITISV_018405 [Vitis vinifera]
Length = 1302
Score = 68.9 bits (167), Expect = 2e-11
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Frame = -2
Query: 331 SKSRGRFNKSKDRSQSQPRRKFKCYHCGEEGHIKRNCKAWKNREK----KDRRNQISDKD 164
SKSRG N+ + +S++ +C++C +GHIK+ C+ K K K+++N +D
Sbjct: 71 SKSRGPKNRDRSKSKTNKXANVECHYCHLKGHIKKYCRQLKRDMKQGKVKEKKNDNGGED 130
Query: 163 ENTTTPVIDGXXXXXXXXXXECHVADSCVEWVVDSATSYHATPNKEFFTTYKVG 2
+ T D + A WV+DS S HATP K+FFT+Y G
Sbjct: 131 DQVATTTSD---FLIVYDSDVVNFACQETSWVIDSGASIHATPRKDFFTSYTSG 181
>CAN66323.1 hypothetical protein VITISV_007384 [Vitis vinifera]
Length = 1317
Score = 68.9 bits (167), Expect = 2e-11
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Frame = -2
Query: 334 RSKSRGRFNKSKDRSQSQPRRKFKCYHCGEEGHIKRNCKAWKNREK----KDRRNQISDK 167
+SKSRG N+ + +S++ +C++C +GHIK+ C+ K K K+++N +
Sbjct: 183 KSKSRGPKNRDRSKSKTNKFANVECHYCHLKGHIKKYCRQLKRDMKQGKVKEKKNDNGGE 242
Query: 166 DENTTTPVIDGXXXXXXXXXXECHVADSCVEWVVDSATSYHATPNKEFFTTYKVG 2
D+ T D + A WV+DS S HATP K+FFT+Y G
Sbjct: 243 DDQVATTTSD---FLIVYDSDVVNFACQETSWVIDSGASIHATPRKDFFTSYTSG 294
>CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 68.9 bits (167), Expect = 2e-11
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Frame = -2
Query: 334 RSKSRGRFNKSKDRSQSQPRRKFKCYHCGEEGHIKRNCKAWKNREK----KDRRNQISDK 167
RSKSRG N+ + +S++ +C++C +GHIK+ C+ K K K+++N +
Sbjct: 183 RSKSRGPKNRDRSKSKTNKFANVECHYCHLKGHIKKYCRQLKRDMKQGKVKEKKNDNGGE 242
Query: 166 DENTTTPVIDGXXXXXXXXXXECHVADSCVE--WVVDSATSYHATPNKEFFTTYKVG 2
D+ T + D V +C E WV+D S HATP K+FFT+Y G
Sbjct: 243 DDQVATTISDFLIVYDSDV-----VNFACQESXWVIDXGASIHATPQKDFFTSYTSG 294
>KYP40209.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 169
Score = 64.7 bits (156), Expect = 1e-10
Identities = 38/111 (34%), Positives = 59/111 (53%)
Frame = -2
Query: 334 RSKSRGRFNKSKDRSQSQPRRKFKCYHCGEEGHIKRNCKAWKNREKKDRRNQISDKDENT 155
+ +S+G KSK +S+S + +C++C + GHI+RN WK +E K ++ + D D+
Sbjct: 14 KKESKGGGEKSKSKSRSI-YKNVECHYCHKIGHIQRNFFLWK-KENKGKKEKDHDDDDRV 71
Query: 154 TTPVIDGXXXXXXXXXXECHVADSCVEWVVDSATSYHATPNKEFFTTYKVG 2
T G V+D + W+VDS + H TP KEFFT+Y G
Sbjct: 72 ATATC-GDLVILSDHGSINLVSDESM-WIVDSGATLHVTPRKEFFTSYTSG 120
>CAN64589.1 hypothetical protein VITISV_008453 [Vitis vinifera]
Length = 903
Score = 67.0 bits (162), Expect = 1e-10
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Frame = -2
Query: 334 RSKSRGRFNKSKDRSQSQPRRKFKCYHCGEEGHIKRNCKAWKNREK----KDRRNQISDK 167
RSKSRG N+ + +S++ +C++C +GHI++ C K K KD++N +
Sbjct: 101 RSKSRGPKNRDRSKSKTNKFANVECHYCHLKGHIRKYCSQLKRYMKQGKVKDKKNDNDGE 160
Query: 166 DENTTTPVIDGXXXXXXXXXXECHVADSCVEWVVDSATSYHATPNKEFFTTY 11
D+ T + + A WV+DS+ S HATP K+FFT+Y
Sbjct: 161 DDRVATTTSN---FLIVYDSDVVNFACQETSWVIDSSASIHATPQKDFFTSY 209
>CAN61851.1 hypothetical protein VITISV_036278, partial [Vitis vinifera]
Length = 973
Score = 67.0 bits (162), Expect = 1e-10
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Frame = -2
Query: 334 RSKSRGRFNKSKDRSQSQPRRKFKCYHCGEEGHIKRNCKAWKNREK----KDRRNQISDK 167
RSKSRG N+ + +S++ +C +C + HI++ C+ K K KD++N S +
Sbjct: 138 RSKSRGPKNRDRSKSKTNKFVNVECLYCHLKWHIRKYCRQLKKDMKQGKVKDKKNDNSGE 197
Query: 166 DENTTTPVIDGXXXXXXXXXXECHVADSCVEWVVDSATSYHATPNKEFFTTYKVG 2
D+ T D + A WV+DS S HATP K FFT+Y G
Sbjct: 198 DDRVATTTSD---FLIIYDSDVVNFARQETNWVIDSGASIHATPRKNFFTSYTFG 249
>BAA11674.1 unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 67.0 bits (162), Expect = 1e-10
Identities = 30/111 (27%), Positives = 61/111 (54%)
Frame = -2
Query: 334 RSKSRGRFNKSKDRSQSQPRRKFKCYHCGEEGHIKRNCKAWKNREKKDRRNQISDKDENT 155
RS+++ + N+ K R +S +C++C ++GHIKR C+ ++N +KK++ ++ +E++
Sbjct: 206 RSQNKSQSNRDKSRGKSNKFANVECHYCKKKGHIKRFCRQFQNDQKKNKGKKVK-PEESS 264
Query: 154 TTPVIDGXXXXXXXXXXECHVADSCVEWVVDSATSYHATPNKEFFTTYKVG 2
++ + WV+DS + HATP +E F++Y +G
Sbjct: 265 DDETNSFGEFNVVYDDDIINLTTQEMTWVIDSGATIHATPRRELFSSYTLG 315
>CAN81755.1 hypothetical protein VITISV_020922 [Vitis vinifera]
Length = 310
Score = 66.2 bits (160), Expect = 1e-10
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Frame = -2
Query: 334 RSKSR---GRFNKSKDRSQSQPRRKFKCYHCGEEGHIKRNCKAWKNREKKDRRNQISDKD 164
RSK+R +N+ K R +S R++ KC++ G+ GHIKR C+ +K + K N K+
Sbjct: 32 RSKNRKPSSDYNRDKSRGKSNSRKEIKCFYYGKPGHIKRECRKFKKEQFKG--NGEVQKE 89
Query: 163 ENTTTPVIDGXXXXXXXXXXECHVADSCVEWVVDSATSYHATPNKEFFTTYKVG 2
+ V ++A WVVD+ TS+H T ++FF++Y G
Sbjct: 90 DKDIAVVASNADTIIVCDDACVNLACQDSTWVVDTTTSFHITACRDFFSSYTSG 143
>CAN75500.1 hypothetical protein VITISV_034155 [Vitis vinifera]
Length = 405
Score = 66.2 bits (160), Expect = 2e-10
Identities = 32/111 (28%), Positives = 58/111 (52%)
Frame = -2
Query: 334 RSKSRGRFNKSKDRSQSQPRRKFKCYHCGEEGHIKRNCKAWKNREKKDRRNQISDKDENT 155
RS SR N +++RS+S+ ++ +C++CG+ GH KR CK+ K + + D N ++++ ++
Sbjct: 218 RSNSR---NSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKNQDDSANAVTEEVQDA 274
Query: 154 TTPVIDGXXXXXXXXXXECHVADSCVEWVVDSATSYHATPNKEFFTTYKVG 2
+D +WV+DS S+H TP++E Y G
Sbjct: 275 LLLAVDSPLD----------------DWVLDSGASFHTTPHREIIQNYVAG 309