BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00027262
         (299 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAX19931.1 viral replicase [Nandina mosaic virus]                     143   1e-37
AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   137   1e-35
NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 ...   133   3e-34
AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiat...   119   4e-29
ANY93292.1 RdRp [Plantago asiatica mosaic virus]                      117   1e-28
AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   117   1e-28
AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   117   1e-28
CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   117   1e-28
AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   116   4e-28
AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   115   5e-28
BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   115   7e-28
BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   113   4e-27
BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   112   6e-27
BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   112   6e-27
BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   112   6e-27
BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   112   6e-27
BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosai...   112   6e-27
AMD78101.1 RdRP [Plantago asiatica mosaic virus]                      112   8e-27
NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC1678...    71   2e-12

>AAX19931.1 viral replicase [Nandina mosaic virus]
          Length = 1368

 Score =  143 bits (360), Expect = 1e-37
 Identities = 67/99 (67%), Positives = 78/99 (78%)
 Frame = -3

Query: 297 DIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPED 118
           D+QR+L FFRGRPSFVKLIKALDWQPITLEFPVR VNTRLRGPPGF +PFT+P PVNP+D
Sbjct: 373 DMQRILHFFRGRPSFVKLIKALDWQPITLEFPVRRVNTRLRGPPGFLSPFTRPQPVNPDD 432

Query: 117 ADTMRAFREFSYTAETSTPTTIADSLEGSAENLASHTSL 1
           A+T  +FREF      S   T+ + LE S E+  +HTSL
Sbjct: 433 AETTESFREFIQPLNPSPTATVTEMLENSTESDVTHTSL 471


>AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1387

 Score =  137 bits (346), Expect = 1e-35
 Identities = 65/99 (65%), Positives = 75/99 (75%)
 Frame = -3

Query: 297 DIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPED 118
           D QRVLQFF+GRPSFVKLIKALDWQPITLEFPVR V T +RGPPGF NPFT+P PVNPED
Sbjct: 373 DFQRVLQFFQGRPSFVKLIKALDWQPITLEFPVRDVRTTVRGPPGFKNPFTQPQPVNPED 432

Query: 117 ADTMRAFREFSYTAETSTPTTIADSLEGSAENLASHTSL 1
           ADT R F++F+         T+  +LE +AE+   HT L
Sbjct: 433 ADTSRGFQDFTRATTPKLQPTVEATLEATAESSDHHTQL 471


>NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 RecName:
           Full=RNA replication protein; AltName: Full=156 kDa
           protein; AltName: Full=ORF1 protein; Includes: RecName:
           Full=RNA-directed RNA polymerase; Includes: RecName:
           Full=Helicase CAA79761.1 156K-protein [Plantago asiatica
           mosaic virus]
          Length = 1385

 Score =  133 bits (335), Expect = 3e-34
 Identities = 64/98 (65%), Positives = 73/98 (74%)
 Frame = -3

Query: 294 IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDA 115
           I R+LQFFRGRPSFVKLIKALDWQPITLEFPVR V T +RGPPGF NPFT+P PVNPEDA
Sbjct: 372 ISRILQFFRGRPSFVKLIKALDWQPITLEFPVRDVRTTVRGPPGFKNPFTQPQPVNPEDA 431

Query: 114 DTMRAFREFSYTAETSTPTTIADSLEGSAENLASHTSL 1
           D    F++FS    ++   T+   LE SAE+   HT L
Sbjct: 432 DISSRFQDFSRATNSTPKPTVEAVLEASAESPDHHTQL 469


>AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
           virus]
          Length = 669

 Score =  119 bits (297), Expect = 4e-29
 Identities = 58/96 (60%), Positives = 69/96 (71%)
 Frame = -3

Query: 288 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 109
           ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNP+DA+T
Sbjct: 376 QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAET 435

Query: 108 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSL 1
             +F+ F   A       +  +LE  AE    H SL
Sbjct: 436 THSFQAFCQAA-----AAVETTLEQQAETPDEHQSL 466


>ANY93292.1 RdRp [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  117 bits (294), Expect = 1e-28
 Identities = 58/96 (60%), Positives = 68/96 (70%)
 Frame = -3

Query: 288 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 109
           ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNP+DA+T
Sbjct: 376 QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAET 435

Query: 108 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSL 1
             +F+ F   A       +   LE  AE    H SL
Sbjct: 436 THSFQAFCQAA-----AAVETILEQQAETPDEHQSL 466


>AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  117 bits (294), Expect = 1e-28
 Identities = 58/96 (60%), Positives = 68/96 (70%)
 Frame = -3

Query: 288 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 109
           ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNP+DA+T
Sbjct: 376 QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAET 435

Query: 108 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSL 1
             +F+ F   A       +   LE  AE    H SL
Sbjct: 436 THSFQAFCQAA-----AAVETILEQQAETPDEHXSL 466


>AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
           AMY62708.1 RNA-dependent RNA polymerase [Plantago
           asiatica mosaic virus]
          Length = 1380

 Score =  117 bits (294), Expect = 1e-28
 Identities = 58/96 (60%), Positives = 68/96 (70%)
 Frame = -3

Query: 288 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 109
           ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNP+DA+T
Sbjct: 376 QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAET 435

Query: 108 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSL 1
             +F+ F   A       +   LE  AE    H SL
Sbjct: 436 THSFQAFCQAA-----AAVETILEQQAETPDEHQSL 466


>CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  117 bits (294), Expect = 1e-28
 Identities = 58/96 (60%), Positives = 68/96 (70%)
 Frame = -3

Query: 288 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 109
           ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNP+DA+T
Sbjct: 376 QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAET 435

Query: 108 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSL 1
             +F+ F   A       +   LE  AE    H SL
Sbjct: 436 THSFQAFCQAA-----AAVETILEQQAETPDEHQSL 466


>AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  116 bits (290), Expect = 4e-28
 Identities = 57/96 (59%), Positives = 67/96 (69%)
 Frame = -3

Query: 288 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 109
           ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PF +P PVNP+DA+T
Sbjct: 376 QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFARPQPVNPDDAET 435

Query: 108 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSL 1
             +F+ F           +   LE SAE    H SL
Sbjct: 436 THSFQAF-----CQATAAVGTILEQSAETPDEHQSL 466


>AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  115 bits (289), Expect = 5e-28
 Identities = 57/96 (59%), Positives = 68/96 (70%)
 Frame = -3

Query: 288 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 109
           ++L FFRGRPSFVKLI+ALDWQPITLEFPVR V+T LRGPPGF +PFT+P PVNP+DA+T
Sbjct: 376 QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVDTLLRGPPGFDSPFTRPQPVNPDDAET 435

Query: 108 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSL 1
             +F+ F   A       +   LE  AE    H SL
Sbjct: 436 THSFQAFCQAA-----AAVETILEQQAETPDEHQSL 466


>BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  115 bits (288), Expect = 7e-28
 Identities = 58/98 (59%), Positives = 69/98 (70%)
 Frame = -3

Query: 294 IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDA 115
           I ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA
Sbjct: 374 ITQLLNFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDA 433

Query: 114 DTMRAFREFSYTAETSTPTTIADSLEGSAENLASHTSL 1
           +T ++F+ F     T+       +LE  AE    H SL
Sbjct: 434 ETTQSFQAFCQATITAEA-----ALEQQAETPDEHQSL 466


>BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  113 bits (282), Expect = 4e-27
 Identities = 55/98 (56%), Positives = 68/98 (69%)
 Frame = -3

Query: 294 IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDA 115
           + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA
Sbjct: 374 LTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDA 433

Query: 114 DTMRAFREFSYTAETSTPTTIADSLEGSAENLASHTSL 1
           +T ++F+ F          T+  +L   +E    H SL
Sbjct: 434 ETTQSFQAF-----CQATATVEXTLAQQSETPDEHQSL 466


>BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  112 bits (281), Expect = 6e-27
 Identities = 55/98 (56%), Positives = 68/98 (69%)
 Frame = -3

Query: 294 IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDA 115
           + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA
Sbjct: 374 LTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDA 433

Query: 114 DTMRAFREFSYTAETSTPTTIADSLEGSAENLASHTSL 1
           +T ++F+ F          T+  +L   +E    H SL
Sbjct: 434 ETTQSFQAF-----CQATATVEATLAQQSETPDEHQSL 466


>BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  112 bits (281), Expect = 6e-27
 Identities = 55/98 (56%), Positives = 68/98 (69%)
 Frame = -3

Query: 294 IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDA 115
           + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA
Sbjct: 374 LTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDA 433

Query: 114 DTMRAFREFSYTAETSTPTTIADSLEGSAENLASHTSL 1
           +T ++F+ F          T+  +L   +E    H SL
Sbjct: 434 ETTQSFQAF-----CQATATVEATLAQQSETPDEHQSL 466


>BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  112 bits (281), Expect = 6e-27
 Identities = 55/98 (56%), Positives = 68/98 (69%)
 Frame = -3

Query: 294 IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDA 115
           + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA
Sbjct: 374 LTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDA 433

Query: 114 DTMRAFREFSYTAETSTPTTIADSLEGSAENLASHTSL 1
           +T ++F+ F          T+  +L   +E    H SL
Sbjct: 434 ETTQSFQAF-----CQATATVEATLAQQSETPDEHQSL 466


>BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  112 bits (281), Expect = 6e-27
 Identities = 55/98 (56%), Positives = 68/98 (69%)
 Frame = -3

Query: 294 IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDA 115
           + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA
Sbjct: 374 LTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDA 433

Query: 114 DTMRAFREFSYTAETSTPTTIADSLEGSAENLASHTSL 1
           +T ++F+ F          T+  +L   +E    H SL
Sbjct: 434 ETTQSFQAF-----CQATATVEATLAQQSETPDEHQSL 466


>BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  112 bits (281), Expect = 6e-27
 Identities = 55/98 (56%), Positives = 68/98 (69%)
 Frame = -3

Query: 294 IQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDA 115
           + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNP+DA
Sbjct: 374 LTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDA 433

Query: 114 DTMRAFREFSYTAETSTPTTIADSLEGSAENLASHTSL 1
           +T ++F+ F          T+  +L   +E    H SL
Sbjct: 434 ETTQSFQAF-----CQATATVEATLAQQSETPDEHQSL 466


>AMD78101.1 RdRP [Plantago asiatica mosaic virus]
          Length = 1380

 Score =  112 bits (280), Expect = 8e-27
 Identities = 56/96 (58%), Positives = 66/96 (68%)
 Frame = -3

Query: 288 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDADT 109
           ++L FFRGRPSFVKLI+ALDWQPITLEFPVR V+T LRGPP F +PFT+P PVNP+DA+T
Sbjct: 376 QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVHTLLRGPPWFDSPFTRPQPVNPDDAET 435

Query: 108 MRAFREFSYTAETSTPTTIADSLEGSAENLASHTSL 1
              F+ F   A       +   LE  AE    H SL
Sbjct: 436 THIFQAFCQAA-----AAVETILEQQAETPEEHQSL 466


>NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC16785.1
           RNA-dependent RNA polymerase [Tulip virus X]
          Length = 1361

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 34/64 (53%), Positives = 41/64 (64%)
 Frame = -3

Query: 291 QRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPEDAD 112
           Q +++FF+G P   KLIKAL WQP+ LEF V TV    R PPGF +P  +P PVN  DA 
Sbjct: 374 QALVRFFKGSPDHTKLIKALQWQPVLLEFKVSTVLVHKRTPPGFRHPLCRPLPVNEVDAL 433

Query: 111 TMRA 100
           T  A
Sbjct: 434 TTAA 437