BLASTX nr result

ID: Glycyrrhiza34_contig00026463 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00026463
         (392 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006606039.1 PREDICTED: F-box/LRR-repeat protein At4g14103-lik...    82   1e-15
XP_006606038.1 PREDICTED: F-box/LRR-repeat protein At4g14103-lik...    82   1e-15
CDP09023.1 unnamed protein product [Coffea canephora]                  61   2e-08
OMO72904.1 hypothetical protein CCACVL1_17534 [Corchorus capsula...    57   5e-07
XP_013455707.1 cytochrome C biogenesis protein ccsA [Medicago tr...    56   2e-06
XP_003628780.1 F-box/RNI superfamily protein [Medicago truncatul...    55   3e-06
XP_003608299.2 cytochrome C biogenesis protein ccsA [Medicago tr...    54   5e-06
GAU17947.1 hypothetical protein TSUD_330720 [Trifolium subterran...    54   1e-05

>XP_006606039.1 PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X2
           [Glycine max]
          Length = 414

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 41/64 (64%), Positives = 51/64 (79%)
 Frame = -2

Query: 196 MMEEGLSTLVAKSQKLNNEGNVDCIVDRISNLPDRVIKCILNSLETKNAVRTSVLSRKWH 17
           M+EEGLST  AK QKLNN+ NVD   D I NLP+ +I+ IL+ L TK+AV+TSVLSR+WH
Sbjct: 1   MIEEGLSTCKAKFQKLNNKVNVDGHKDWIGNLPNEIIQHILSLLPTKDAVKTSVLSRRWH 60

Query: 16  SRWM 5
           S+WM
Sbjct: 61  SQWM 64


>XP_006606038.1 PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X1
           [Glycine max] KRG91243.1 hypothetical protein
           GLYMA_20G142600 [Glycine max]
          Length = 468

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 41/64 (64%), Positives = 51/64 (79%)
 Frame = -2

Query: 196 MMEEGLSTLVAKSQKLNNEGNVDCIVDRISNLPDRVIKCILNSLETKNAVRTSVLSRKWH 17
           M+EEGLST  AK QKLNN+ NVD   D I NLP+ +I+ IL+ L TK+AV+TSVLSR+WH
Sbjct: 1   MIEEGLSTCKAKFQKLNNKVNVDGHKDWIGNLPNEIIQHILSLLPTKDAVKTSVLSRRWH 60

Query: 16  SRWM 5
           S+WM
Sbjct: 61  SQWM 64


>CDP09023.1 unnamed protein product [Coffea canephora]
          Length = 515

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 29/64 (45%), Positives = 42/64 (65%)
 Frame = -2

Query: 193 MEEGLSTLVAKSQKLNNEGNVDCIVDRISNLPDRVIKCILNSLETKNAVRTSVLSRKWHS 14
           M+  L  LV+K QK+ ++G     +DR+SNLPD ++  IL+ L TK AVRT +LS +W  
Sbjct: 1   MDANLDILVSKQQKIIDDGAASVCLDRLSNLPDELLCQILSFLPTKYAVRTGILSSRWKD 60

Query: 13  RWMS 2
            W+S
Sbjct: 61  LWVS 64


>OMO72904.1 hypothetical protein CCACVL1_17534 [Corchorus capsularis]
          Length = 511

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 29/64 (45%), Positives = 39/64 (60%)
 Frame = -2

Query: 193 MEEGLSTLVAKSQKLNNEGNVDCIVDRISNLPDRVIKCILNSLETKNAVRTSVLSRKWHS 14
           ME   S   AK+ K N E N       ++NLPD +++ IL+ L TK AVRTS+LS++W  
Sbjct: 1   MEVDSSAPTAKTLKTNKEQNTADTGQTLTNLPDSILQLILSFLPTKQAVRTSILSKRWRY 60

Query: 13  RWMS 2
            WMS
Sbjct: 61  LWMS 64


>XP_013455707.1 cytochrome C biogenesis protein ccsA [Medicago truncatula]
           KEH29738.1 cytochrome C biogenesis protein ccsA
           [Medicago truncatula]
          Length = 586

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
 Frame = -2

Query: 280 LSSSKQGVT*DVNKTSNCTTAT-HYGKQRMMEEGLSTLVAKSQKLNNEGNVDCIVDRISN 104
           LSSSK+     + +  + T  + H   QR++ + L  L        NE N +   DR+S+
Sbjct: 13  LSSSKRHKHGSIEQHYHMTIKSKHMSPQRLLFQRLLNLSLFHYIAENENNEE-YEDRLSD 71

Query: 103 LPDRVIKCILNSLETKNAVRTSVLSRKWHSRW 8
           LP+ VI CIL+ L TK+ VRT VLSR+W   W
Sbjct: 72  LPNSVILCILSFLNTKDGVRTCVLSRRWKDIW 103


>XP_003628780.1 F-box/RNI superfamily protein [Medicago truncatula] AET03256.1
           F-box/RNI superfamily protein [Medicago truncatula]
          Length = 451

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 29/76 (38%), Positives = 48/76 (63%)
 Frame = -2

Query: 235 SNCTTATHYGKQRMMEEGLSTLVAKSQKLNNEGNVDCIVDRISNLPDRVIKCILNSLETK 56
           S   TA+ + K  +   G  +   K ++ NN  + +   DRIS+LPD ++  IL+SLETK
Sbjct: 42  SGALTASKFCKSVVSPAGNRSFQMKKRRKNNHNHTEN-KDRISDLPDCILFHILSSLETK 100

Query: 55  NAVRTSVLSRKWHSRW 8
           +AV+T++LS +W++ W
Sbjct: 101 HAVQTTILSTRWNNLW 116


>XP_003608299.2 cytochrome C biogenesis protein ccsA [Medicago truncatula]
           AES90496.2 cytochrome C biogenesis protein ccsA
           [Medicago truncatula]
          Length = 417

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 28/51 (54%), Positives = 35/51 (68%)
 Frame = -2

Query: 160 SQKLNNEGNVDCIVDRISNLPDRVIKCILNSLETKNAVRTSVLSRKWHSRW 8
           SQK  NE N +   DR+S+LP+ VI CIL+ L TK+ VRT VLSR+W   W
Sbjct: 37  SQKEENENNEE-YEDRLSDLPNSVILCILSFLNTKDGVRTCVLSRRWKDIW 86


>GAU17947.1 hypothetical protein TSUD_330720 [Trifolium subterraneum]
          Length = 426

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 26/50 (52%), Positives = 32/50 (64%)
 Frame = -2

Query: 151 LNNEGNVDCIVDRISNLPDRVIKCILNSLETKNAVRTSVLSRKWHSRWMS 2
           LN +GN D  +DRIS+LP  VI  IL  L  ++ VRTS+LS KW   W S
Sbjct: 4   LNKKGNQDDQIDRISDLPSNVIDGILEHLNIRDVVRTSILSTKWRYMWTS 53


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