BLASTX nr result

ID: Glycyrrhiza34_contig00025853 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00025853
         (444 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019427492.1 PREDICTED: putative pentatricopeptide repeat-cont...    77   2e-13
XP_015954426.1 PREDICTED: pentatricopeptide repeat-containing pr...    63   8e-09
XP_016188951.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   3e-07

>XP_019427492.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330 [Lupinus angustifolius]
          Length = 978

 Score = 76.6 bits (187), Expect = 2e-13
 Identities = 42/79 (53%), Positives = 52/79 (65%)
 Frame = -2

Query: 251 SIPRKQKPLQLTKQCHPTTSSTHGRSWTIPGRVPNGRRHGSVPQREKIEEEEPMIILNLN 72
           S+P K      T+ CHPT+ STH +S  I   VP+G++HGSVPQRE IEEE      N++
Sbjct: 44  SVPFKSSSAT-TQLCHPTSISTHEKSLMINKTVPSGKKHGSVPQREDIEEEHS----NVD 98

Query: 71  NKQRLKLYSSLLGDCTSRE 15
            K RLK +SSLLGDC  RE
Sbjct: 99  TKLRLKHHSSLLGDCALRE 117


>XP_015954426.1 PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Arachis duranensis] XP_015954427.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g03880, mitochondrial-like [Arachis duranensis]
           XP_015954428.1 PREDICTED: pentatricopeptide
           repeat-containing protein At2g03880, mitochondrial-like
           [Arachis duranensis] XP_015954429.1 PREDICTED:
           pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Arachis duranensis]
          Length = 963

 Score = 63.2 bits (152), Expect = 8e-09
 Identities = 42/89 (47%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
 Frame = -2

Query: 266 SILFTSIPRKQ------KPLQLTKQCHPTTSSTHGRSWTIPGRVPNGRRHGSVPQREKIE 105
           S  F S+P  Q      KP Q       T SS   RS T P R P+GR H SVPQ EK  
Sbjct: 15  SFQFLSLPILQVQIFSHKPPQNPFNIFSTVSSAQQRSGTTPKRDPSGRNHRSVPQTEKNI 74

Query: 104 EEEPMIILNLNNKQRLKLYSSLLGDCTSR 18
           E +P    N+ +KQRLK YSSLLG+C  R
Sbjct: 75  EMKPS---NVGSKQRLKRYSSLLGNCALR 100


>XP_016188951.1 PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Arachis ipaensis] XP_016188952.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial-like [Arachis ipaensis]
           XP_016188953.1 PREDICTED: pentatricopeptide
           repeat-containing protein At3g24000, mitochondrial-like
           [Arachis ipaensis] XP_016188954.1 PREDICTED:
           pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Arachis ipaensis] XP_016188955.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial-like [Arachis ipaensis]
          Length = 963

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 40/89 (44%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
 Frame = -2

Query: 266 SILFTSIPRKQ------KPLQLTKQCHPTTSSTHGRSWTIPGRVPNGRRHGSVPQREKIE 105
           S  F S+P  Q      KP +       T SS   RS T P R P+G  H SVPQ EK  
Sbjct: 15  SFQFLSLPILQVQIFSHKPPRNPFNIFSTVSSAQQRSGTTPKRDPSGINHRSVPQTEKNI 74

Query: 104 EEEPMIILNLNNKQRLKLYSSLLGDCTSR 18
           E +P    N+ +KQRLK YSSLLG+C  R
Sbjct: 75  EMKPS---NVGSKQRLKRYSSLLGNCALR 100


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