BLASTX nr result
ID: Glycyrrhiza34_contig00025667
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza34_contig00025667
(327 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_004492098.1 PREDICTED: pentatricopeptide repeat-containing pr... 58 3e-12
KHN13884.1 Pentatricopeptide repeat-containing protein [Glycine ... 54 1e-10
XP_003551820.1 PREDICTED: pentatricopeptide repeat-containing pr... 54 1e-10
XP_003599019.1 PPR containing plant-like protein [Medicago trunc... 51 6e-10
XP_019172733.1 PREDICTED: pentatricopeptide repeat-containing pr... 43 2e-08
XP_019172738.1 PREDICTED: pentatricopeptide repeat-containing pr... 43 2e-08
GAU17785.1 hypothetical protein TSUD_171740 [Trifolium subterran... 51 3e-07
XP_007139252.1 hypothetical protein PHAVU_008G013900g, partial [... 47 1e-06
>XP_004492098.1 PREDICTED: pentatricopeptide repeat-containing protein At2g39620
[Cicer arietinum]
Length = 858
Score = 58.2 bits (139), Expect(2) = 3e-12
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = -2
Query: 134 VQNSLPAMYSKCGEEYLAHRIFDRTLVYNDISWLTMMVGILK 9
V NSL MYSKCGE YLA RIFDR V +D+SW TMM G ++
Sbjct: 235 VSNSLIDMYSKCGEVYLARRIFDRMRVMDDVSWATMMAGYVQ 276
Score = 40.4 bits (93), Expect(2) = 3e-12
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 51/101 (50%)
Frame = -1
Query: 285 ISLGTGLIDILCLRGQVDSARNLFDKMHKKDVAS-------------------------- 184
+ +GT L+++ C G +DSAR +FDKM KKDV +
Sbjct: 134 VFIGTSLVNMFCKMGHLDSARKVFDKMPKKDVTTWNAMISGLSQSLNPCEGMEMFWRMQV 193
Query: 183 -------------------------CKSIHSYGVRRYNCGM 136
CKSIH Y VRR CG+
Sbjct: 194 EGVEVDTVSILNLAPAVSRLEDFGCCKSIHGYVVRRGICGV 234
>KHN13884.1 Pentatricopeptide repeat-containing protein [Glycine soja]
Length = 887
Score = 54.3 bits (129), Expect(2) = 1e-10
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -2
Query: 134 VQNSLPAMYSKCGEEYLAHRIFDRTLVYNDISWLTMMVG 18
V NSL MYSKCGE LAH+IFD+ V +DISW TMM G
Sbjct: 264 VSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAG 302
Score = 38.9 bits (89), Expect(2) = 1e-10
Identities = 28/97 (28%), Positives = 35/97 (36%), Gaps = 52/97 (53%)
Frame = -1
Query: 285 ISLGTGLIDILCLRGQVDSARNLFDKMHKKDVAS-------------------------- 184
+ +GTGL+D+ C G +D+AR +FDKM KDVAS
Sbjct: 162 VFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFRRMQM 221
Query: 183 --------------------------CKSIHSYGVRR 151
CKSIH Y VRR
Sbjct: 222 EEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRR 258
>XP_003551820.1 PREDICTED: pentatricopeptide repeat-containing protein At2g39620
[Glycine max]
Length = 887
Score = 54.3 bits (129), Expect(2) = 1e-10
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -2
Query: 134 VQNSLPAMYSKCGEEYLAHRIFDRTLVYNDISWLTMMVG 18
V NSL MYSKCGE LAH+IFD+ V +DISW TMM G
Sbjct: 264 VSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAG 302
Score = 38.9 bits (89), Expect(2) = 1e-10
Identities = 28/97 (28%), Positives = 35/97 (36%), Gaps = 52/97 (53%)
Frame = -1
Query: 285 ISLGTGLIDILCLRGQVDSARNLFDKMHKKDVAS-------------------------- 184
+ +GTGL+D+ C G +D+AR +FDKM KDVAS
Sbjct: 162 VFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQM 221
Query: 183 --------------------------CKSIHSYGVRR 151
CKSIH Y VRR
Sbjct: 222 EEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRR 258
>XP_003599019.1 PPR containing plant-like protein [Medicago truncatula] AES69270.1
PPR containing plant-like protein [Medicago truncatula]
Length = 944
Score = 51.2 bits (121), Expect(2) = 6e-10
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = -2
Query: 134 VQNSLPAMYSKCGEEYLAHRIFDRTLVYNDISWLTMMVGILKD 6
V NSL MY KCG+ + A R+FDR V +D+SW TMM G +K+
Sbjct: 235 VSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKN 277
Score = 39.7 bits (91), Expect(2) = 6e-10
Identities = 29/101 (28%), Positives = 36/101 (35%), Gaps = 51/101 (50%)
Frame = -1
Query: 285 ISLGTGLIDILCLRGQVDSARNLFDKMHKKD----------------------------- 193
+ +GT LID+ C G +D+ARN+FDKM KD
Sbjct: 134 VYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQM 193
Query: 192 ----------------------VASCKSIHSYGVRRYNCGM 136
V CKSIH Y VRR CG+
Sbjct: 194 EGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICGV 234
>XP_019172733.1 PREDICTED: pentatricopeptide repeat-containing protein At2g39620
isoform X1 [Ipomoea nil] XP_019172734.1 PREDICTED:
pentatricopeptide repeat-containing protein At2g39620
isoform X1 [Ipomoea nil] XP_019172735.1 PREDICTED:
pentatricopeptide repeat-containing protein At2g39620
isoform X1 [Ipomoea nil] XP_019172736.1 PREDICTED:
pentatricopeptide repeat-containing protein At2g39620
isoform X1 [Ipomoea nil] XP_019172737.1 PREDICTED:
pentatricopeptide repeat-containing protein At2g39620
isoform X1 [Ipomoea nil]
Length = 909
Score = 42.7 bits (99), Expect(2) = 2e-08
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 14/70 (20%)
Frame = -1
Query: 285 ISLGTGLIDILCLRGQVDSARNLFDKMHKKDVASCKSIHS--------------YGVRRY 148
+ +GTGL+ + C G + SAR +FDKM KKDV + ++ S + ++
Sbjct: 196 VFIGTGLVSLYCKTGNLKSAREMFDKMPKKDVVAWNAMISGFSQSSEPTDALEFFKYMQF 255
Query: 147 NCGMGPKLIA 118
+CG+ P ++
Sbjct: 256 SCGVQPNSVS 265
Score = 42.7 bits (99), Expect(2) = 2e-08
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = -2
Query: 134 VQNSLPAMYSKCGEEYLAHRIFDRTLVYNDISWLTMMVG 18
V N L MYSKCG +AH +F + V +D+SW T+M G
Sbjct: 298 VYNGLIDMYSKCGHSNVAHHVFYQMRVRDDVSWGTVMAG 336
>XP_019172738.1 PREDICTED: pentatricopeptide repeat-containing protein At2g39620
isoform X2 [Ipomoea nil]
Length = 867
Score = 42.7 bits (99), Expect(2) = 2e-08
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 14/70 (20%)
Frame = -1
Query: 285 ISLGTGLIDILCLRGQVDSARNLFDKMHKKDVASCKSIHS--------------YGVRRY 148
+ +GTGL+ + C G + SAR +FDKM KKDV + ++ S + ++
Sbjct: 154 VFIGTGLVSLYCKTGNLKSAREMFDKMPKKDVVAWNAMISGFSQSSEPTDALEFFKYMQF 213
Query: 147 NCGMGPKLIA 118
+CG+ P ++
Sbjct: 214 SCGVQPNSVS 223
Score = 42.7 bits (99), Expect(2) = 2e-08
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = -2
Query: 134 VQNSLPAMYSKCGEEYLAHRIFDRTLVYNDISWLTMMVG 18
V N L MYSKCG +AH +F + V +D+SW T+M G
Sbjct: 256 VYNGLIDMYSKCGHSNVAHHVFYQMRVRDDVSWGTVMAG 294
>GAU17785.1 hypothetical protein TSUD_171740 [Trifolium subterraneum]
Length = 370
Score = 51.2 bits (121), Expect(2) = 3e-07
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -2
Query: 134 VQNSLPAMYSKCGEEYLAHRIFDRTLVY-NDISWLTMMVGILKD 6
V NSL MYSKCGE +LA RIFDR V +D+SW TMM G +++
Sbjct: 43 VLNSLIDMYSKCGEVHLARRIFDRMQVMDDDVSWATMMAGYVQN 86
Score = 30.4 bits (67), Expect(2) = 3e-07
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 198 KDVASCKSIHSYGVRRYNCGM 136
+D+ CKSIH Y +RR CG+
Sbjct: 22 EDIGCCKSIHGYVIRRSICGV 42
>XP_007139252.1 hypothetical protein PHAVU_008G013900g, partial [Phaseolus
vulgaris] ESW11246.1 hypothetical protein
PHAVU_008G013900g, partial [Phaseolus vulgaris]
Length = 834
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = -1
Query: 285 ISLGTGLIDILCLRGQVDSARNLFDKMHKKDVASCKSIHS 166
+ +GTGL+D+ C G +DSAR +FDKM KDVAS ++ S
Sbjct: 158 VFIGTGLVDMYCKMGHLDSARKVFDKMPMKDVASWNTMIS 197
Score = 32.7 bits (73), Expect(2) = 1e-06
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -2
Query: 86 LAHRIFDRTLVYNDISWLTMMVG 18
LA RIFD V +D+SW TMM G
Sbjct: 227 LARRIFDEMQVKDDVSWATMMAG 249