BLASTX nr result

ID: Glycyrrhiza34_contig00024773 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00024773
         (262 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_013445434.1 PPR repeat protein [Medicago truncatula] KEH19460...    59   2e-09
XP_013445433.1 PPR repeat protein [Medicago truncatula] KEH19459...    59   3e-09
XP_012575444.1 PREDICTED: putative pentatricopeptide repeat-cont...    60   9e-09
XP_019465046.1 PREDICTED: putative pentatricopeptide repeat-cont...    59   4e-08
KHN46681.1 Putative pentatricopeptide repeat-containing protein ...    55   8e-07
XP_003525968.1 PREDICTED: putative pentatricopeptide repeat-cont...    55   1e-06
KYP56671.1 Putative pentatricopeptide repeat-containing protein ...    52   6e-06

>XP_013445434.1 PPR repeat protein [Medicago truncatula] KEH19460.1 PPR repeat
           protein [Medicago truncatula]
          Length = 110

 Score = 59.3 bits (142), Expect = 2e-09
 Identities = 30/46 (65%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
 Frame = -2

Query: 261 TVLSGLVSRGNYSCNEDVWNVVVSMVCKPEKL-PEPFEIFDALVLA 127
           TVLSGL SRG + CNE +WNV+VS+VCK EKL  EPF+IF AL ++
Sbjct: 66  TVLSGLASRGEF-CNEGIWNVLVSVVCKQEKLAAEPFKIFKALAVS 110


>XP_013445433.1 PPR repeat protein [Medicago truncatula] KEH19459.1 PPR repeat
           protein [Medicago truncatula]
          Length = 134

 Score = 59.3 bits (142), Expect = 3e-09
 Identities = 30/46 (65%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
 Frame = -2

Query: 261 TVLSGLVSRGNYSCNEDVWNVVVSMVCKPEKL-PEPFEIFDALVLA 127
           TVLSGL SRG + CNE +WNV+VS+VCK EKL  EPF+IF AL ++
Sbjct: 90  TVLSGLASRGEF-CNEGIWNVLVSVVCKQEKLAAEPFKIFKALAVS 134


>XP_012575444.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330 [Cicer arietinum]
          Length = 458

 Score = 60.5 bits (145), Expect = 9e-09
 Identities = 31/44 (70%), Positives = 37/44 (84%), Gaps = 1/44 (2%)
 Frame = -2

Query: 261 TVLSGLVSRGNYSCNEDVWNVVVSMVCKPEKL-PEPFEIFDALV 133
           TVLSGLVSRG++ CN  +WNV+V MVC+PEKL  +PFEIFD LV
Sbjct: 415 TVLSGLVSRGDF-CNGSLWNVLVPMVCEPEKLAAKPFEIFDDLV 457


>XP_019465046.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330 [Lupinus angustifolius] OIV99016.1
           hypothetical protein TanjilG_32275 [Lupinus
           angustifolius]
          Length = 483

 Score = 58.5 bits (140), Expect = 4e-08
 Identities = 30/44 (68%), Positives = 35/44 (79%)
 Frame = -2

Query: 261 TVLSGLVSRGNYSCNEDVWNVVVSMVCKPEKLPEPFEIFDALVL 130
           TVLSGL  RGN+  +ED+W +VVS VCKPEKL EPFEI D LV+
Sbjct: 442 TVLSGL-GRGNF-LHEDIWEIVVSRVCKPEKLLEPFEILDTLVV 483


>KHN46681.1 Putative pentatricopeptide repeat-containing protein [Glycine soja]
          Length = 285

 Score = 54.7 bits (130), Expect = 8e-07
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = -2

Query: 258 VLSGLVSRGNYSCNEDVWNVVVSMVCKPEKLPEPFEIFDALVLA 127
           VLSGL   G + CNE+VW  VVS+VCK EKL   FE+ DALVLA
Sbjct: 244 VLSGL--GGGFFCNENVWKTVVSLVCKSEKLSGAFELLDALVLA 285


>XP_003525968.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330 [Glycine max] XP_006582122.1 PREDICTED:
           putative pentatricopeptide repeat-containing protein
           At1g53330 [Glycine max] XP_014632167.1 PREDICTED:
           putative pentatricopeptide repeat-containing protein
           At1g53330 [Glycine max] KRH55064.1 hypothetical protein
           GLYMA_06G227700 [Glycine max]
          Length = 465

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = -2

Query: 258 VLSGLVSRGNYSCNEDVWNVVVSMVCKPEKLPEPFEIFDALVLA 127
           VLSGL   G + CNE+VW  VVS+VCK EKL   FE+ DALVLA
Sbjct: 424 VLSGL--GGGFFCNENVWKTVVSLVCKSEKLSGAFELLDALVLA 465


>KYP56671.1 Putative pentatricopeptide repeat-containing protein At1g53330
           family [Cajanus cajan]
          Length = 459

 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 27/43 (62%), Positives = 31/43 (72%)
 Frame = -2

Query: 258 VLSGLVSRGNYSCNEDVWNVVVSMVCKPEKLPEPFEIFDALVL 130
           VLSGL   G   C+EDVW  VVS+VCK EK+   FE+FDALVL
Sbjct: 418 VLSGLGREG--FCSEDVWRTVVSLVCKSEKMLGAFEVFDALVL 458


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