BLASTX nr result
ID: Glycyrrhiza34_contig00023962
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza34_contig00023962
(606 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP52417.1 hypothetical protein KK1_025722 [Cajanus cajan] 124 1e-31
KYP73297.1 Putative ribonuclease H protein At1g65750 family [Caj... 122 1e-30
KYP67311.1 hypothetical protein KK1_013638 [Cajanus cajan] 121 2e-30
KYP47723.1 Putative ribonuclease H protein At1g65750 family [Caj... 120 7e-29
KYP73308.1 LINE-1 reverse transcriptase isogeny [Cajanus cajan] 122 9e-29
GAU50575.1 hypothetical protein TSUD_409990 [Trifolium subterran... 122 1e-28
KYP73000.1 Putative ribonuclease H protein At1g65750 family [Caj... 121 2e-28
GAU35104.1 hypothetical protein TSUD_162080 [Trifolium subterran... 118 2e-28
GAU39768.1 hypothetical protein TSUD_220120 [Trifolium subterran... 118 2e-28
GAU14725.1 hypothetical protein TSUD_203740 [Trifolium subterran... 120 5e-28
KYP54863.1 Putative ribonuclease H protein At1g65750 family [Caj... 120 5e-28
KYP46318.1 Transposon TX1 uncharacterized [Cajanus cajan] 120 7e-28
GAU51940.1 hypothetical protein TSUD_417220, partial [Trifolium ... 117 1e-27
KYP50465.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca... 113 1e-27
KYP35530.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca... 115 3e-27
KYP75188.1 Retrovirus-related Pol polyprotein LINE-1, partial [C... 118 3e-27
KYP50453.1 LINE-1 reverse transcriptase isogeny [Cajanus cajan] 115 3e-27
ABN05720.1 RNA-directed DNA polymerase (Reverse transcriptase) [... 115 4e-27
GAU19481.1 hypothetical protein TSUD_77250 [Trifolium subterraneum] 117 4e-27
KYP56887.1 Putative ribonuclease H protein At1g65750 family, par... 113 4e-27
>KYP52417.1 hypothetical protein KK1_025722 [Cajanus cajan]
Length = 269
Score = 124 bits (312), Expect = 1e-31
Identities = 59/96 (61%), Positives = 74/96 (77%), Gaps = 2/96 (2%)
Frame = +3
Query: 324 SANISILVNGSPTDEFKVGRGLRQGDPLSPFLFLIVAEGLNALFNKATGLGLFEGYKVG- 500
++ IS+L+NGSPT EF +GRGLRQGDPL+PFLFLIV EGLN++ + LF GYKVG
Sbjct: 17 TSRISVLINGSPTSEFGLGRGLRQGDPLAPFLFLIVVEGLNSMMSNVVQANLFIGYKVGR 76
Query: 501 -ELPISHLHFADDTLIIGEKSSKNVWAIKLLLQLFE 605
++ +SHL FADDT+I+GE S N+W IK LQLFE
Sbjct: 77 DKVQLSHLQFADDTIILGESSMSNIWVIKAFLQLFE 112
>KYP73297.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 274
Score = 122 bits (306), Expect = 1e-30
Identities = 62/96 (64%), Positives = 74/96 (77%), Gaps = 2/96 (2%)
Frame = +3
Query: 324 SANISILVNGSPTDEFKVGRGLRQGDPLSPFLFLIVAEGLNALFNKATGLGLFEGYKVG- 500
+ I +L+NGSPT EF VG+GLRQGDPL+PFLFLIVAEGLNAL +KA + GY VG
Sbjct: 17 TTRIFVLLNGSPTGEFGVGKGLRQGDPLAPFLFLIVAEGLNALMSKAVERHVLSGYSVGH 76
Query: 501 -ELPISHLHFADDTLIIGEKSSKNVWAIKLLLQLFE 605
+ +SHL +ADDTLIIG SS NVWAIK +LQ+FE
Sbjct: 77 QSVNVSHLQYADDTLIIGGASSHNVWAIKSILQIFE 112
Score = 103 bits (256), Expect = 3e-23
Identities = 48/107 (44%), Positives = 65/107 (60%)
Frame = +2
Query: 2 LKVNFHKSQLLGVNVGDVWLERAAGFLNCKIGVFPFVYLGLPIGADARKKSTWVPVVEKI 181
LKVNFHKS+L G N+ L A FLNCK+G PF YLGLP+GA+ TW PV+ K+
Sbjct: 117 LKVNFHKSKLFGFNINIEVLNLMAQFLNCKVGSLPFCYLGLPLGANPHCIKTWEPVISKV 176
Query: 182 RRRLSSWDSSHXXXXXXXXXXXXXXYALPVFYLSFFRVPVGVTNQIE 322
++RLS W SS ++P +YLSFF+ P G+ +++E
Sbjct: 177 KKRLSKWKSSTLSFGGRSVLLKSVLNSIPTYYLSFFKAPQGIISKLE 223
>KYP67311.1 hypothetical protein KK1_013638 [Cajanus cajan]
Length = 245
Score = 121 bits (303), Expect = 2e-30
Identities = 58/96 (60%), Positives = 76/96 (79%), Gaps = 2/96 (2%)
Frame = +3
Query: 324 SANISILVNGSPTDEFKVGRGLRQGDPLSPFLFLIVAEGLNALFNKATGLGLFEGYKVGE 503
+A +S+L+NGSP+ EF VGRGLRQGDPL+PFLFLIVAEG +AL KA +F GY+ G+
Sbjct: 20 TARVSVLLNGSPSSEFGVGRGLRQGDPLAPFLFLIVAEGFHALMAKAVEFQVFVGYEAGQ 79
Query: 504 --LPISHLHFADDTLIIGEKSSKNVWAIKLLLQLFE 605
+ +SHL +ADDTL+IGE S +N+WAIK + QLF+
Sbjct: 80 EAVLVSHLQYADDTLVIGEASLQNIWAIKAIFQLFK 115
>KYP47723.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 434
Score = 120 bits (302), Expect = 7e-29
Identities = 57/96 (59%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
Frame = +3
Query: 321 RSANISILVNGSPTDEFKVGRGLRQGDPLSPFLFLIVAEGLNALFNKATGLGLFEGYKVG 500
+++ +S+LVNGSPT+EF V +GLRQGDPL+PFLFLIVAEGLN LF KA+ LG F GY+VG
Sbjct: 16 QTSRVSVLVNGSPTEEFSVSKGLRQGDPLAPFLFLIVAEGLNGLFKKASQLGTFTGYEVG 75
Query: 501 -ELPISHLHFADDTLIIGEKSSKNVWAIKLLLQLFE 605
+ L +ADDT+I+ + N+WAIK +L+LFE
Sbjct: 76 RNQQVDVLQYADDTIILAKAKESNIWAIKSILRLFE 111
Score = 112 bits (279), Expect = 1e-25
Identities = 50/107 (46%), Positives = 72/107 (67%)
Frame = +2
Query: 2 LKVNFHKSQLLGVNVGDVWLERAAGFLNCKIGVFPFVYLGLPIGADARKKSTWVPVVEKI 181
LK+NF KSQLLG +V +WL+ A FL+C+IG PF YLGLPIGA+ ++ TW PV+EKI
Sbjct: 116 LKINFLKSQLLGFHVDTLWLQSMAMFLHCRIGSLPFTYLGLPIGANPKRLDTWQPVIEKI 175
Query: 182 RRRLSSWDSSHXXXXXXXXXXXXXXYALPVFYLSFFRVPVGVTNQIE 322
++RLSSW +++P+++LSFF+ P G+ +Q+E
Sbjct: 176 QKRLSSWKCDSMSFGGRITLLKSVLHSIPIYFLSFFKAPRGIISQLE 222
>KYP73308.1 LINE-1 reverse transcriptase isogeny [Cajanus cajan]
Length = 675
Score = 122 bits (306), Expect = 9e-29
Identities = 62/96 (64%), Positives = 74/96 (77%), Gaps = 2/96 (2%)
Frame = +3
Query: 324 SANISILVNGSPTDEFKVGRGLRQGDPLSPFLFLIVAEGLNALFNKATGLGLFEGYKVG- 500
+ I +L+NGSPT EF VG+GLRQGDPL+PFLFLIVAEGLNAL +KA + GY VG
Sbjct: 189 TTRIFVLLNGSPTGEFGVGKGLRQGDPLAPFLFLIVAEGLNALMSKAVERHVLSGYSVGH 248
Query: 501 -ELPISHLHFADDTLIIGEKSSKNVWAIKLLLQLFE 605
+ +SHL +ADDTLIIG SS NVWAIK +LQ+FE
Sbjct: 249 QSVNVSHLQYADDTLIIGGASSHNVWAIKSILQIFE 284
Score = 87.4 bits (215), Expect = 1e-16
Identities = 40/70 (57%), Positives = 49/70 (70%)
Frame = +2
Query: 2 LKVNFHKSQLLGVNVGDVWLERAAGFLNCKIGVFPFVYLGLPIGADARKKSTWVPVVEKI 181
LKVNFHKS+L G N+ L A FLNCK+G PF YLGLP+GA+ R TW PV+ K+
Sbjct: 289 LKVNFHKSKLFGFNINIEVLNLMAQFLNCKVGSLPFCYLGLPLGANPRCIKTWEPVISKV 348
Query: 182 RRRLSSWDSS 211
++RLS W SS
Sbjct: 349 KKRLSKWKSS 358
>GAU50575.1 hypothetical protein TSUD_409990 [Trifolium subterraneum]
Length = 1404
Score = 122 bits (306), Expect = 1e-28
Identities = 62/99 (62%), Positives = 74/99 (74%), Gaps = 5/99 (5%)
Frame = +3
Query: 324 SANISILVNGSPTDEFKVGRGLRQGDPLSPFLFLIVAEGLNALFNKATGLGLFEGYKVGE 503
SA S+LVNGSPT+EF GRGLR+GDPLSPFLFL+ AEGLN + + LF+GY +G+
Sbjct: 42 SATASVLVNGSPTEEFHFGRGLRKGDPLSPFLFLLAAEGLNVMLKTSVNAELFKGYMIGD 101
Query: 504 LP-----ISHLHFADDTLIIGEKSSKNVWAIKLLLQLFE 605
+P ISHL FADDTLI+GEKS N+ AIK LL LFE
Sbjct: 102 VPDSQVCISHLQFADDTLIVGEKSWANIRAIKALLILFE 140
Score = 109 bits (272), Expect = 4e-24
Identities = 50/107 (46%), Positives = 68/107 (63%)
Frame = +2
Query: 2 LKVNFHKSQLLGVNVGDVWLERAAGFLNCKIGVFPFVYLGLPIGADARKKSTWVPVVEKI 181
LKVNFHKS L+G+ V WL A+ +NCK+G PF+YLGLPIG + R+ S W+P++EKI
Sbjct: 145 LKVNFHKSMLVGITVDGNWLIAASLVVNCKVGQIPFIYLGLPIGGNPRRHSLWIPLLEKI 204
Query: 182 RRRLSSWDSSHXXXXXXXXXXXXXXYALPVFYLSFFRVPVGVTNQIE 322
R+RLS W S +LPV++LSFF+ P G+ + E
Sbjct: 205 RKRLSGWKSRSLSMGGRFVLVKSVLSSLPVYFLSFFKAPTGIIHSNE 251
>KYP73000.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 616
Score = 121 bits (303), Expect = 2e-28
Identities = 59/93 (63%), Positives = 74/93 (79%), Gaps = 2/93 (2%)
Frame = +3
Query: 333 ISILVNGSPTDEFKVGRGLRQGDPLSPFLFLIVAEGLNALFNKATGLGLFEGYKVGE--L 506
+S+L+NGSP+ EF VGRGLRQGDPL+PFLFLIVAEG +AL KA +F GYK G+ +
Sbjct: 57 LSVLLNGSPSSEFGVGRGLRQGDPLAPFLFLIVAEGFHALMAKAVESQVFVGYKAGQEAV 116
Query: 507 PISHLHFADDTLIIGEKSSKNVWAIKLLLQLFE 605
+SHL +ADDTL+IGE S +N+WAIK + QLFE
Sbjct: 117 LVSHLQYADDTLVIGEASLQNIWAIKAIFQLFE 149
Score = 103 bits (256), Expect = 5e-22
Identities = 47/107 (43%), Positives = 66/107 (61%)
Frame = +2
Query: 2 LKVNFHKSQLLGVNVGDVWLERAAGFLNCKIGVFPFVYLGLPIGADARKKSTWVPVVEKI 181
LKVNFHKS+L G+NV L+ A FLNC +G PF YLGLPIGA+ TW PV+ K+
Sbjct: 154 LKVNFHKSKLYGINVDRELLDGMALFLNCTVGSLPFSYLGLPIGANPILLKTWDPVISKV 213
Query: 182 RRRLSSWDSSHXXXXXXXXXXXXXXYALPVFYLSFFRVPVGVTNQIE 322
++RLS W + +++P++YLSFF+ P G+ ++E
Sbjct: 214 QKRLSKWKGKNLSFGGRSVLLKSVLHSIPIYYLSFFKAPTGIITRLE 260
>GAU35104.1 hypothetical protein TSUD_162080 [Trifolium subterraneum]
Length = 350
Score = 118 bits (295), Expect = 2e-28
Identities = 63/94 (67%), Positives = 74/94 (78%), Gaps = 3/94 (3%)
Frame = +3
Query: 333 ISILVNGSPTDEFKVGRGLRQGDPLSPFLFLIVAEGLNALFNKATGLGLFEGYKVG---E 503
ISIL+NGSP+ EFK+ RGLRQGDPLSPFLFL+VAEGLN L NKA G F GY VG +
Sbjct: 2 ISILINGSPSKEFKMERGLRQGDPLSPFLFLMVAEGLNVLINKAVADGSFVGYGVGREEK 61
Query: 504 LPISHLHFADDTLIIGEKSSKNVWAIKLLLQLFE 605
+ +SHL FA DTLIIG KS +N++AIK +LQL E
Sbjct: 62 VFVSHLQFAYDTLIIGRKSWENIFAIKSILQLCE 95
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/45 (60%), Positives = 31/45 (68%)
Frame = +2
Query: 2 LKVNFHKSQLLGVNVGDVWLERAAGFLNCKIGVFPFVYLGLPIGA 136
LKVNF+KS L G+NV WL AA LNC IG P YLG+PIG+
Sbjct: 100 LKVNFNKSTLYGINVKTSWLVEAASALNCNIGELPMKYLGMPIGS 144
>GAU39768.1 hypothetical protein TSUD_220120 [Trifolium subterraneum]
Length = 376
Score = 118 bits (296), Expect = 2e-28
Identities = 61/98 (62%), Positives = 73/98 (74%), Gaps = 3/98 (3%)
Frame = +3
Query: 321 RSANISILVNGSPTDEFKVGRGLRQGDPLSPFLFLIVAEGLNALFNKATGLGLFEGYKVG 500
RSA+ S+LVNGSPTDEF RGLRQGDPLSPFLFLI AEGLNA+ N + LF G+ VG
Sbjct: 153 RSASASVLVNGSPTDEFTFERGLRQGDPLSPFLFLIAAEGLNAMVNASVHANLFSGFSVG 212
Query: 501 E---LPISHLHFADDTLIIGEKSSKNVWAIKLLLQLFE 605
E I+HL FADDTL++ +K+ N+ AIK +L LFE
Sbjct: 213 EDVPFQITHLQFADDTLMVADKNWANIRAIKSILLLFE 250
>GAU14725.1 hypothetical protein TSUD_203740 [Trifolium subterraneum]
Length = 1843
Score = 120 bits (301), Expect = 5e-28
Identities = 61/97 (62%), Positives = 74/97 (76%), Gaps = 3/97 (3%)
Frame = +3
Query: 324 SANISILVNGSPTDEFKVGRGLRQGDPLSPFLFLIVAEGLNALFNKATGLGLFEGYKVGE 503
+A+ S+LVNGSPT+EF +GRGLRQGDPLSPFLFLI AEGLN L A LF GY +GE
Sbjct: 1382 TASASVLVNGSPTEEFPLGRGLRQGDPLSPFLFLIAAEGLNVLMEAAVARNLFTGYSIGE 1441
Query: 504 ---LPISHLHFADDTLIIGEKSSKNVWAIKLLLQLFE 605
+ +SHL FADDTL+IG KS NV A++++L LFE
Sbjct: 1442 RDHVSVSHLQFADDTLLIGVKSWANVRALRVVLVLFE 1478
Score = 99.8 bits (247), Expect = 9e-21
Identities = 48/101 (47%), Positives = 61/101 (60%)
Frame = +2
Query: 2 LKVNFHKSQLLGVNVGDVWLERAAGFLNCKIGVFPFVYLGLPIGADARKKSTWVPVVEKI 181
LKVNFHKS L+GVN+ + WL AA L CK+G PF+YLGL IG D R+ S W PV+ ++
Sbjct: 1483 LKVNFHKSMLVGVNIPESWLGEAASALCCKVGKIPFLYLGLSIGGDPRRLSFWEPVLARL 1542
Query: 182 RRRLSSWDSSHXXXXXXXXXXXXXXYALPVFYLSFFRVPVG 304
+ RLS W S +LPV+ LSFF+ P G
Sbjct: 1543 KNRLSGWKSRFLSFGGRLVLLKSVLQSLPVYALSFFKAPSG 1583
>KYP54863.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 648
Score = 120 bits (300), Expect = 5e-28
Identities = 61/96 (63%), Positives = 73/96 (76%), Gaps = 2/96 (2%)
Frame = +3
Query: 324 SANISILVNGSPTDEFKVGRGLRQGDPLSPFLFLIVAEGLNALFNKATGLGLFEGYKVG- 500
+ I +L+NGSPT EF VG+GLRQGD L+PFLFLIVAEGLNAL +K +F GY VG
Sbjct: 21 TTRIFVLLNGSPTGEFGVGKGLRQGDLLAPFLFLIVAEGLNALMSKVVECHVFSGYSVGH 80
Query: 501 -ELPISHLHFADDTLIIGEKSSKNVWAIKLLLQLFE 605
+ +SHL +ADDTLIIG SS NVWAIK +LQ+FE
Sbjct: 81 QSVSVSHLQYADDTLIIGGASSHNVWAIKSILQIFE 116
Score = 106 bits (264), Expect = 4e-23
Identities = 49/107 (45%), Positives = 67/107 (62%)
Frame = +2
Query: 2 LKVNFHKSQLLGVNVGDVWLERAAGFLNCKIGVFPFVYLGLPIGADARKKSTWVPVVEKI 181
LKVNFHKS+L G N+ L A FLNCK+G PF YLGLP+GA+ R TW PV+ K+
Sbjct: 121 LKVNFHKSKLFGFNINIEVLNLMAQFLNCKVGSLPFCYLGLPLGANPRCIKTWEPVISKV 180
Query: 182 RRRLSSWDSSHXXXXXXXXXXXXXXYALPVFYLSFFRVPVGVTNQIE 322
++RLS W SS ++P++YLSFF+ P G+ +++E
Sbjct: 181 KKRLSKWKSSTLSFGGRSVLLKSVLNSIPIYYLSFFKAPQGIISKLE 227
>KYP46318.1 Transposon TX1 uncharacterized [Cajanus cajan]
Length = 863
Score = 120 bits (300), Expect = 7e-28
Identities = 60/93 (64%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Frame = +3
Query: 330 NISILVNGSPTDEFKVGRGLRQGDPLSPFLFLIVAEGLNALFNKATGLGLFEGYKVGELP 509
++SILVNGSPT E +GRGL+QGDPLSPFLFL+VAEGL AL A GLF+G +VGE P
Sbjct: 402 HLSILVNGSPTKEAAIGRGLKQGDPLSPFLFLVVAEGLGALMRSAVSKGLFKGVQVGEGP 461
Query: 510 -ISHLHFADDTLIIGEKSSKNVWAIKLLLQLFE 605
IS L FADDTL+IGE + +N+W+IK +L+ FE
Sbjct: 462 EISLLQFADDTLLIGEATERNLWSIKAVLRCFE 494
Score = 94.0 bits (232), Expect = 8e-19
Identities = 42/106 (39%), Positives = 65/106 (61%)
Frame = +2
Query: 2 LKVNFHKSQLLGVNVGDVWLERAAGFLNCKIGVFPFVYLGLPIGADARKKSTWVPVVEKI 181
LK+NFHKS L+G+NV + ++ A+ FLNCK+G PF YLGL +G R+++ W ++E +
Sbjct: 499 LKINFHKSCLMGMNVDNNFMHMASSFLNCKVGALPFCYLGLYVGDKPRRRAAWQRLIEVL 558
Query: 182 RRRLSSWDSSHXXXXXXXXXXXXXXYALPVFYLSFFRVPVGVTNQI 319
R +L SW + +LP+ YLSF+R+P GV ++
Sbjct: 559 RNKLVSWKHKYVSIGGRVTLINSVLNSLPLHYLSFWRMPPGVIKEV 604
>GAU51940.1 hypothetical protein TSUD_417220, partial [Trifolium subterraneum]
Length = 444
Score = 117 bits (294), Expect = 1e-27
Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 3/97 (3%)
Frame = +3
Query: 324 SANISILVNGSPTDEFKVGRGLRQGDPLSPFLFLIVAEGLNALFNKATGLGLFEGYKVGE 503
+A S+LVNGSPT+EF +GRGLRQGDPLSPFLFL+ AEGLN + A LF GY VGE
Sbjct: 337 TATASVLVNGSPTEEFPLGRGLRQGDPLSPFLFLLAAEGLNVMMEAAVACNLFTGYSVGE 396
Query: 504 ---LPISHLHFADDTLIIGEKSSKNVWAIKLLLQLFE 605
+ +SHL FADDTL++G KS NV A++ +L LFE
Sbjct: 397 RDPVSVSHLQFADDTLLLGVKSWANVRALRAVLVLFE 433
>KYP50465.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 219
Score = 113 bits (282), Expect = 1e-27
Identities = 57/91 (62%), Positives = 71/91 (78%), Gaps = 2/91 (2%)
Frame = +3
Query: 339 ILVNGSPTDEFKVGRGLRQGDPLSPFLFLIVAEGLNALFNKATGLGLFEGYKVG--ELPI 512
+LVNGSPT+EF V +GLRQGDPL+PFLFLIVAEGL LFNKA+ L F+G VG ++P+
Sbjct: 3 VLVNGSPTEEFGVSKGLRQGDPLAPFLFLIVAEGLFMLFNKASQLERFKGCLVGKDKVPV 62
Query: 513 SHLHFADDTLIIGEKSSKNVWAIKLLLQLFE 605
L +ADDTLI+G S N+W IK +L+LFE
Sbjct: 63 DILQYADDTLIMGHASYSNIWTIKSILRLFE 93
Score = 98.2 bits (243), Expect = 7e-22
Identities = 46/107 (42%), Positives = 65/107 (60%)
Frame = +2
Query: 2 LKVNFHKSQLLGVNVGDVWLERAAGFLNCKIGVFPFVYLGLPIGADARKKSTWVPVVEKI 181
LKVNF KS L+G NV WL+ A L+C +G PF YLGLPIG + R STW V+EK+
Sbjct: 98 LKVNFSKSPLMGYNVESQWLQIMASILHCWVGSIPFSYLGLPIGVNYRMISTWHLVIEKV 157
Query: 182 RRRLSSWDSSHXXXXXXXXXXXXXXYALPVFYLSFFRVPVGVTNQIE 322
++RLS W + +++P+++LSFF+ P G+ + IE
Sbjct: 158 KKRLSRWKCTTLSFGGRIALLKFVLHSIPIYFLSFFKAPKGIISSIE 204
>KYP35530.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 360
Score = 115 bits (288), Expect = 3e-27
Identities = 57/97 (58%), Positives = 75/97 (77%), Gaps = 2/97 (2%)
Frame = +3
Query: 321 RSANISILVNGSPTDEFKVGRGLRQGDPLSPFLFLIVAEGLNALFNKATGLGLFEGYKVG 500
+++ S+LVNGSPT+EF V +GLRQGDPL+PFLFLIVAEGL LFNKA+ L F+G +G
Sbjct: 141 KTSRTSVLVNGSPTEEFGVSKGLRQGDPLAPFLFLIVAEGLFTLFNKASQLERFKGCLMG 200
Query: 501 --ELPISHLHFADDTLIIGEKSSKNVWAIKLLLQLFE 605
++P+ L +ADDTLI+G S N+W IK +L+LFE
Sbjct: 201 KDKVPVDILQYADDTLIMGHASHSNIWTIKSILRLFE 237
Score = 99.8 bits (247), Expect = 2e-21
Identities = 47/107 (43%), Positives = 67/107 (62%)
Frame = +2
Query: 2 LKVNFHKSQLLGVNVGDVWLERAAGFLNCKIGVFPFVYLGLPIGADARKKSTWVPVVEKI 181
LKVNF KS L+G NV L+ A L+C++G PF YLGLPIGA+ R STW PV+EK+
Sbjct: 242 LKVNFSKSTLMGYNVESQQLQIMASILHCRVGSTPFSYLGLPIGANHRMISTWHPVIEKV 301
Query: 182 RRRLSSWDSSHXXXXXXXXXXXXXXYALPVFYLSFFRVPVGVTNQIE 322
++RLS W + +++P+++LSFF+ P G+ + IE
Sbjct: 302 KKRLSRWKCTTLSFGGRIALLKSVLHSIPIYFLSFFKAPKGIISSIE 348
>KYP75188.1 Retrovirus-related Pol polyprotein LINE-1, partial [Cajanus cajan]
Length = 855
Score = 118 bits (295), Expect = 3e-27
Identities = 58/96 (60%), Positives = 74/96 (77%), Gaps = 2/96 (2%)
Frame = +3
Query: 324 SANISILVNGSPTDEFKVGRGLRQGDPLSPFLFLIVAEGLNALFNKATGLGLFEGYKVGE 503
+A +S+ NGSP+ EF VGRGLRQG+PL+P LFL+VAEGLN+L KA + +F+GY G
Sbjct: 332 TARVSVPFNGSPSSEFGVGRGLRQGNPLAPLLFLLVAEGLNSLMTKAIQMQVFKGYSAGR 391
Query: 504 --LPISHLHFADDTLIIGEKSSKNVWAIKLLLQLFE 605
+PIS L +ADDT+ +GE S KNVWAIK +LQLFE
Sbjct: 392 DGIPISLLQYADDTIFVGEASWKNVWAIKSVLQLFE 427
Score = 96.3 bits (238), Expect = 1e-19
Identities = 46/107 (42%), Positives = 63/107 (58%)
Frame = +2
Query: 2 LKVNFHKSQLLGVNVGDVWLERAAGFLNCKIGVFPFVYLGLPIGADARKKSTWVPVVEKI 181
LKVNFHKS+LLG N+ L R A FLNCK+G FP YLGL IGA + STW V+ K+
Sbjct: 432 LKVNFHKSKLLGANIDSEILGRMASFLNCKVGHFPCSYLGLFIGAKPNRLSTWQTVISKV 491
Query: 182 RRRLSSWDSSHXXXXXXXXXXXXXXYALPVFYLSFFRVPVGVTNQIE 322
++L+ W ++ +++LSFF+ P GV +Q+E
Sbjct: 492 EKKLTKWKGKLLSFGGRLVLLKSVLNSISIYFLSFFKAPTGVISQLE 538
>KYP50453.1 LINE-1 reverse transcriptase isogeny [Cajanus cajan]
Length = 375
Score = 115 bits (288), Expect = 3e-27
Identities = 57/97 (58%), Positives = 76/97 (78%), Gaps = 2/97 (2%)
Frame = +3
Query: 321 RSANISILVNGSPTDEFKVGRGLRQGDPLSPFLFLIVAEGLNALFNKATGLGLFEGYKVG 500
+++ +S+LVNGSPT+EF V +GLRQGDPL+PFLFLIVAEGL LFNKA+ L F+G VG
Sbjct: 147 KTSRMSVLVNGSPTEEFSVSKGLRQGDPLAPFLFLIVAEGLFMLFNKASQLERFKGCLVG 206
Query: 501 --ELPISHLHFADDTLIIGEKSSKNVWAIKLLLQLFE 605
++P+ L +A+DTLI+G S N+W IK +L+LFE
Sbjct: 207 KDKVPVDILQYANDTLIMGHASYSNIWTIKSILRLFE 243
Score = 98.2 bits (243), Expect = 8e-21
Identities = 46/107 (42%), Positives = 65/107 (60%)
Frame = +2
Query: 2 LKVNFHKSQLLGVNVGDVWLERAAGFLNCKIGVFPFVYLGLPIGADARKKSTWVPVVEKI 181
LKVNF KS L+G NV WL+ A L+C +G PF YLGLPIG + R STW V+EK+
Sbjct: 248 LKVNFSKSPLMGYNVESQWLQIMASILHCWVGSIPFSYLGLPIGVNYRMISTWHLVIEKV 307
Query: 182 RRRLSSWDSSHXXXXXXXXXXXXXXYALPVFYLSFFRVPVGVTNQIE 322
++RLS W + +++P+++LSFF+ P G+ + IE
Sbjct: 308 KKRLSRWKCTTLSFGGRIALLKFVLHSIPIYFLSFFKAPKGIISSIE 354
>ABN05720.1 RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 391
Score = 115 bits (288), Expect = 4e-27
Identities = 58/97 (59%), Positives = 72/97 (74%), Gaps = 3/97 (3%)
Frame = +3
Query: 324 SANISILVNGSPTDEFKVGRGLRQGDPLSPFLFLIVAEGLNALFNKATGLGLFEGYKVG- 500
+A S+LVNGSPTDEF +GRGL QGDPLSPFLFL+ AEGL+ + LF GY+VG
Sbjct: 20 TATASVLVNGSPTDEFPLGRGLLQGDPLSPFLFLLAAEGLHVMMKAMVDASLFRGYRVGS 79
Query: 501 --ELPISHLHFADDTLIIGEKSSKNVWAIKLLLQLFE 605
E+ +SHL FADDTL++GEKS NV A++ +L LFE
Sbjct: 80 GNEVVVSHLQFADDTLLLGEKSWANVRALRTVLILFE 116
Score = 115 bits (288), Expect = 4e-27
Identities = 57/117 (48%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
Frame = +2
Query: 2 LKVNFHKSQLLGVNVGDVWLERAAGFLNCKIGVFPFVYLGLPIGADARKKSTWVPVVEKI 181
LK+NFHKS L+GVNV D WL AA LNCK+G PF YLGLPIG + R+ S W PVV +I
Sbjct: 121 LKINFHKSLLVGVNVADSWLTEAASLLNCKVGSLPFTYLGLPIGGNPRRLSFWEPVVHRI 180
Query: 182 RRRLSSWDSSHXXXXXXXXXXXXXXYALPVFYLSFFRVPVGVTNQIE--VGQYFYFG 346
+ RLSSW S ALPV+ LSFF+ P G + I+ + ++F+ G
Sbjct: 181 KSRLSSWQSRFLSFGGRLILVKSVLSALPVYALSFFKAPAGTISSIDSILSKFFWGG 237
>GAU19481.1 hypothetical protein TSUD_77250 [Trifolium subterraneum]
Length = 1139
Score = 117 bits (294), Expect = 4e-27
Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 3/97 (3%)
Frame = +3
Query: 324 SANISILVNGSPTDEFKVGRGLRQGDPLSPFLFLIVAEGLNALFNKATGLGLFEGYKVGE 503
+A S+LVNGSPT+EF +GRGLRQGDPLSPFLFL+ AEGLN L A LF GY +GE
Sbjct: 660 TATASVLVNGSPTEEFPLGRGLRQGDPLSPFLFLLAAEGLNVLMEAAVDRNLFTGYSIGE 719
Query: 504 ---LPISHLHFADDTLIIGEKSSKNVWAIKLLLQLFE 605
+ +SHL FADDTL++G KS NV A++ +L LFE
Sbjct: 720 RDPISVSHLQFADDTLLLGIKSWANVRALRAILGLFE 756
Score = 109 bits (273), Expect = 3e-24
Identities = 50/107 (46%), Positives = 66/107 (61%)
Frame = +2
Query: 2 LKVNFHKSQLLGVNVGDVWLERAAGFLNCKIGVFPFVYLGLPIGADARKKSTWVPVVEKI 181
LKVNFHKS L+GVN+ + WL AA L CK+G+ PF+YLGLPIG D R+ W PV+ ++
Sbjct: 761 LKVNFHKSMLVGVNIPESWLGEAASALRCKVGIIPFLYLGLPIGGDPRRLGFWEPVLARL 820
Query: 182 RRRLSSWDSSHXXXXXXXXXXXXXXYALPVFYLSFFRVPVGVTNQIE 322
+ RLS W S +LPV+ LSFF+ P G+ + IE
Sbjct: 821 KNRLSGWKSRFLSFGGRLVLLKSVLQSLPVYALSFFKAPTGIISSIE 867
>KYP56887.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 281
Score = 113 bits (282), Expect = 4e-27
Identities = 51/107 (47%), Positives = 70/107 (65%)
Frame = +2
Query: 2 LKVNFHKSQLLGVNVGDVWLERAAGFLNCKIGVFPFVYLGLPIGADARKKSTWVPVVEKI 181
LKVNF KSQLLGVNV VWL+ A FLNCK+G FP YLGLP+GA+ + +TW PVV K+
Sbjct: 3 LKVNFFKSQLLGVNVDQVWLQSLAQFLNCKVGSFPCSYLGLPLGANPARLTTWQPVVRKV 62
Query: 182 RRRLSSWDSSHXXXXXXXXXXXXXXYALPVFYLSFFRVPVGVTNQIE 322
++LS W S +++P+++LSFF+ P G+ + +E
Sbjct: 63 EKKLSKWKSKLLSFGGRLVLLKSMLHSIPIYFLSFFKAPKGIISHLE 109