BLASTX nr result
ID: Glycyrrhiza34_contig00023675
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza34_contig00023675
(381 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_009027274.1 RNA polymerase beta' subunit (chloroplast) [Glycy... 256 8e-77
AMC32360.1 RNA polymerase beta'' subunit (chloroplast) [Glycyrrh... 256 1e-76
YP_009334191.1 RpoC2 (chloroplast) [Caragana microphylla] APL973... 224 1e-65
AJE71733.1 RNA polymerase beta'' subunit (plastid) [Astragalus c... 216 9e-63
AJE72727.1 RNA polymerase beta'' subunit (plastid) [Astragalus c... 216 1e-62
AJE71591.1 RNA polymerase beta'' subunit (plastid) [Melilotus of... 215 2e-62
XP_013459648.1 DNA-directed RNA polymerase subunit beta [Medicag... 202 3e-62
YP_009242955.1 RNA polymerase beta'' subunit (chloroplast) [Astr... 214 4e-62
YP_009175761.1 RNA polymerase beta'' subunit (chloroplast) [Astr... 214 4e-62
AJE72230.1 RNA polymerase beta'' subunit (plastid) [Oxytropis la... 213 1e-61
YP_009109932.1 RNA polymerase beta' subunit (chloroplast) [Trifo... 212 3e-61
YP_009027135.1 RNA polymerase beta' subunit [Trifolium aureum] A... 211 4e-61
AIJ28040.1 RNA polymerase beta' subunit (chloroplast) [Trifolium... 210 9e-61
AHY33059.1 RNA polymerase beta' subunit (chloroplast) [Indigofer... 210 1e-60
YP_009141275.1 RNA polymerase beta' subunit (chloroplast) [Lathy... 209 2e-60
YP_009138634.1 RNA polymerase beta' subunit (chloroplast) [Lathy... 208 6e-60
YP_009138406.1 RNA polymerase beta' subunit (chloroplast) [Lathy... 207 1e-59
YP_009109857.1 RNA polymerase beta' subunit (chloroplast) [Trifo... 206 2e-59
YP_009138766.1 RNA polymerase beta' subunit (chloroplast) [Lathy... 206 4e-59
AJE72585.1 RNA polymerase beta'' subunit (plastid) [Trifolium re... 206 4e-59
>YP_009027274.1 RNA polymerase beta' subunit (chloroplast) [Glycyrrhiza glabra]
AGU00070.1 RNA polymerase beta' subunit (chloroplast)
[Glycyrrhiza glabra]
Length = 1388
Score = 256 bits (654), Expect = 8e-77
Identities = 125/126 (99%), Positives = 126/126 (100%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQIKDHCHFMYPAIFHDTSDLLA 200
KRNISNLLVSNDQVKHKLLSFNTFGTKESRIT+YSIFNQIKDHCHFMYPAIFHDTSDLLA
Sbjct: 507 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITNYSIFNQIKDHCHFMYPAIFHDTSDLLA 566
Query: 199 KRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGI 20
KRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGI
Sbjct: 567 KRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGI 626
Query: 19 TKYRTI 2
TKYRTI
Sbjct: 627 TKYRTI 632
>AMC32360.1 RNA polymerase beta'' subunit (chloroplast) [Glycyrrhiza lepidota]
Length = 1388
Score = 256 bits (653), Expect = 1e-76
Identities = 125/126 (99%), Positives = 125/126 (99%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQIKDHCHFMYPAIFHDTSDLLA 200
KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQI DHCHFMYPAIFHDTSDLLA
Sbjct: 507 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQIMDHCHFMYPAIFHDTSDLLA 566
Query: 199 KRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGI 20
KRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGI
Sbjct: 567 KRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSSGI 626
Query: 19 TKYRTI 2
TKYRTI
Sbjct: 627 TKYRTI 632
>YP_009334191.1 RpoC2 (chloroplast) [Caragana microphylla] APL97397.1 RpoC2
(chloroplast) [Caragana microphylla]
Length = 1372
Score = 224 bits (571), Expect = 1e-65
Identities = 112/128 (87%), Positives = 114/128 (89%), Gaps = 2/128 (1%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDL 206
KRNISN LVSNDQVKHKL SFNTFGTKE ITDYSIFN+I DHCH MYPAIFHDT L
Sbjct: 507 KRNISNPLVSNDQVKHKLFSFNTFGTKERGITDYSIFNKIICTDHCHLMYPAIFHDTFSL 566
Query: 205 LAKRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS 26
LAKRRRNRF+IPFP Q IQERKNELM PSGVSIEIPINGIF RNSIFAYFDDPQYRRQSS
Sbjct: 567 LAKRRRNRFLIPFPFQPIQERKNELMPPSGVSIEIPINGIFQRNSIFAYFDDPQYRRQSS 626
Query: 25 GITKYRTI 2
GITKYRTI
Sbjct: 627 GITKYRTI 634
>AJE71733.1 RNA polymerase beta'' subunit (plastid) [Astragalus canadensis]
Length = 1372
Score = 216 bits (550), Expect = 9e-63
Identities = 108/128 (84%), Positives = 113/128 (88%), Gaps = 2/128 (1%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDL 206
K NISNL VSND+VK+KL +FNTFGTKE RIT+YSIFNQI DH H MYPAIFHDT
Sbjct: 507 KTNISNLSVSNDEVKNKLFNFNTFGTKERRITNYSIFNQILCMDHRHLMYPAIFHDTFSF 566
Query: 205 LAKRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS 26
LAKRRRNRF+IPFP QSIQERKNEL PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS
Sbjct: 567 LAKRRRNRFLIPFPFQSIQERKNELTPPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS 626
Query: 25 GITKYRTI 2
GITKYRTI
Sbjct: 627 GITKYRTI 634
>AJE72727.1 RNA polymerase beta'' subunit (plastid) [Astragalus crassicarpus]
Length = 1374
Score = 216 bits (549), Expect = 1e-62
Identities = 108/128 (84%), Positives = 112/128 (87%), Gaps = 2/128 (1%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDL 206
K NISN VSND+VK+KL +FNTFGTKE RITDYSIFNQI DH H MYPAIFHDT
Sbjct: 507 KTNISNRSVSNDEVKNKLFNFNTFGTKERRITDYSIFNQILCMDHRHLMYPAIFHDTFSF 566
Query: 205 LAKRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS 26
LAKRRRNRF+IPFP QSIQERKNEL PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS
Sbjct: 567 LAKRRRNRFLIPFPFQSIQERKNELTPPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS 626
Query: 25 GITKYRTI 2
GITKYRTI
Sbjct: 627 GITKYRTI 634
>AJE71591.1 RNA polymerase beta'' subunit (plastid) [Melilotus officinalis]
AJE71662.1 RNA polymerase beta'' subunit (plastid)
[Melilotus albus]
Length = 1376
Score = 215 bits (547), Expect = 2e-62
Identities = 108/128 (84%), Positives = 113/128 (88%), Gaps = 2/128 (1%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDL 206
K NISNLLVSNDQVKHKLLSF TFGTKE I++YSI NQ+ DH H MYPAIFHDT L
Sbjct: 507 KINISNLLVSNDQVKHKLLSFKTFGTKEKGISNYSILNQMICMDHSHLMYPAIFHDTFYL 566
Query: 205 LAKRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS 26
LAKRRRNRF+IPFP SIQERKNELM PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQ+S
Sbjct: 567 LAKRRRNRFLIPFPFHSIQERKNELMPPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQNS 626
Query: 25 GITKYRTI 2
GITKYRTI
Sbjct: 627 GITKYRTI 634
>XP_013459648.1 DNA-directed RNA polymerase subunit beta [Medicago truncatula]
KEH33679.1 DNA-directed RNA polymerase subunit beta
[Medicago truncatula]
Length = 329
Score = 202 bits (513), Expect = 3e-62
Identities = 104/128 (81%), Positives = 111/128 (86%), Gaps = 2/128 (1%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDL 206
KRNISNLLVSND+VK KLLS TFGTKE I++YSI NQ+ DH H MYPAIFHDT L
Sbjct: 60 KRNISNLLVSNDEVKLKLLSLKTFGTKEKGISNYSILNQMICTDHSHLMYPAIFHDTFYL 119
Query: 205 LAKRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS 26
LAKRRRNRF+IPF QSIQERKNELM P GVSIEIPINGIFHRNSIFAYFDDPQYRRQ+S
Sbjct: 120 LAKRRRNRFLIPF--QSIQERKNELMRPFGVSIEIPINGIFHRNSIFAYFDDPQYRRQNS 177
Query: 25 GITKYRTI 2
GITKYRT+
Sbjct: 178 GITKYRTV 185
>YP_009242955.1 RNA polymerase beta'' subunit (chloroplast) [Astragalus
mongholicus] AMQ99218.1 RNA polymerase beta'' subunit
(chloroplast) [Astragalus mongholicus]
Length = 1376
Score = 214 bits (545), Expect = 4e-62
Identities = 108/130 (83%), Positives = 114/130 (87%), Gaps = 4/130 (3%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQIK----DHCHFMYPAIFHDTS 212
K NISNL VSND+VK+KL +FNT GTKE RITDYSIFNQI+ DHCH MYPA+FHDT
Sbjct: 511 KTNISNLSVSNDEVKNKLFNFNTLGTKERRITDYSIFNQIQILCMDHCHLMYPALFHDTF 570
Query: 211 DLLAKRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQ 32
LAKRRRNRF+IPF QSIQERKNELM PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQ
Sbjct: 571 SFLAKRRRNRFLIPF--QSIQERKNELMRPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQ 628
Query: 31 SSGITKYRTI 2
SSGITKYRTI
Sbjct: 629 SSGITKYRTI 638
>YP_009175761.1 RNA polymerase beta'' subunit (chloroplast) [Astragalus mongholicus
var. nakaianus] ALH42736.1 RNA polymerase beta'' subunit
(chloroplast) [Astragalus mongholicus var. nakaianus]
ANK78900.1 RNA polymerase beta'' subunit (chloroplast)
[Astragalus membranaceus var. membranaceus]
Length = 1372
Score = 214 bits (545), Expect = 4e-62
Identities = 108/130 (83%), Positives = 114/130 (87%), Gaps = 4/130 (3%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQIK----DHCHFMYPAIFHDTS 212
K NISNL VSND+VK+KL +FNT GTKE RITDYSIFNQI+ DHCH MYPA+FHDT
Sbjct: 507 KTNISNLSVSNDEVKNKLFNFNTLGTKERRITDYSIFNQIQILCMDHCHLMYPALFHDTF 566
Query: 211 DLLAKRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQ 32
LAKRRRNRF+IPF QSIQERKNELM PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQ
Sbjct: 567 SFLAKRRRNRFLIPF--QSIQERKNELMRPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQ 624
Query: 31 SSGITKYRTI 2
SSGITKYRTI
Sbjct: 625 SSGITKYRTI 634
>AJE72230.1 RNA polymerase beta'' subunit (plastid) [Oxytropis lambertii]
Length = 1368
Score = 213 bits (542), Expect = 1e-61
Identities = 109/128 (85%), Positives = 113/128 (88%), Gaps = 2/128 (1%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDL 206
K NISNL VSNDQVK+KLL+FNTFGTKE +ITDYSIFNQI DHCH MYPAIFHDT
Sbjct: 507 KTNISNLSVSNDQVKNKLLNFNTFGTKERKITDYSIFNQILCMDHCHLMYPAIFHDTFSF 566
Query: 205 LAKRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS 26
LAKRRRNRF+IPF QSIQERKNEL PSGVSIEIPINGIFHRNSIFA FDDPQYRRQSS
Sbjct: 567 LAKRRRNRFLIPF--QSIQERKNELTPPSGVSIEIPINGIFHRNSIFASFDDPQYRRQSS 624
Query: 25 GITKYRTI 2
GITKYRTI
Sbjct: 625 GITKYRTI 632
>YP_009109932.1 RNA polymerase beta' subunit (chloroplast) [Trifolium strictum]
AIJ28399.1 RNA polymerase beta' subunit (chloroplast)
[Trifolium strictum]
Length = 1364
Score = 212 bits (539), Expect = 3e-61
Identities = 105/128 (82%), Positives = 110/128 (85%), Gaps = 2/128 (1%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDL 206
KRN SNL VS+D VKHK SF TFGTKE I+DYSIF+Q DH H MYPAIFHDT +L
Sbjct: 507 KRNTSNLFVSDDHVKHKFFSFKTFGTKEKGISDYSIFSQTICTDHSHLMYPAIFHDTFNL 566
Query: 205 LAKRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS 26
LAKRRRNRF+IPFP QS QERKNELM PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS
Sbjct: 567 LAKRRRNRFLIPFPFQSTQERKNELMPPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS 626
Query: 25 GITKYRTI 2
GITKYRTI
Sbjct: 627 GITKYRTI 634
>YP_009027135.1 RNA polymerase beta' subunit [Trifolium aureum] AGO63789.1 RNA
polymerase beta' subunit (plastid) [Trifolium aureum]
Length = 1371
Score = 211 bits (538), Expect = 4e-61
Identities = 106/128 (82%), Positives = 110/128 (85%), Gaps = 2/128 (1%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDL 206
KRN SNL VSND VKHK SF TFGTKE I+DYSIFNQ KDH H M PAIFHDT +L
Sbjct: 511 KRNTSNLFVSNDHVKHKFFSFKTFGTKERGISDYSIFNQTICKDHSHLMDPAIFHDTFNL 570
Query: 205 LAKRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS 26
L KRRRNRF+IPFPLQSIQERKNELM PSGVSIEIPINGIFHRNSIFAYFD+PQYRRQSS
Sbjct: 571 LGKRRRNRFLIPFPLQSIQERKNELMPPSGVSIEIPINGIFHRNSIFAYFDNPQYRRQSS 630
Query: 25 GITKYRTI 2
GI KYRTI
Sbjct: 631 GIIKYRTI 638
>AIJ28040.1 RNA polymerase beta' subunit (chloroplast) [Trifolium lupinaster]
Length = 1367
Score = 210 bits (535), Expect = 9e-61
Identities = 104/128 (81%), Positives = 109/128 (85%), Gaps = 2/128 (1%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDL 206
KRN S L VS+D VKHK SF TFGTKE I+DYS+FNQ DH H MYPAIFHD +L
Sbjct: 507 KRNTSTLFVSDDHVKHKFFSFKTFGTKEKGISDYSLFNQTICTDHSHLMYPAIFHDIFNL 566
Query: 205 LAKRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS 26
LAKRRRNRF+IPFP QSIQERKNELM PSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS
Sbjct: 567 LAKRRRNRFLIPFPFQSIQERKNELMPPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS 626
Query: 25 GITKYRTI 2
GITKYRTI
Sbjct: 627 GITKYRTI 634
>AHY33059.1 RNA polymerase beta' subunit (chloroplast) [Indigofera tinctoria]
Length = 1376
Score = 210 bits (534), Expect = 1e-60
Identities = 104/128 (81%), Positives = 110/128 (85%), Gaps = 2/128 (1%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDL 206
+RNISN LVSNDQV+HK SFN G KE RI DYS+FNQI DHCHF++PAIFHDTSDL
Sbjct: 507 ERNISNPLVSNDQVRHKFFSFNPSGKKERRIPDYSVFNQILCMDHCHFIHPAIFHDTSDL 566
Query: 205 LAKRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS 26
LAKRRRNRFIIPFP QSIQER ELM PSG+SIEIPINGIF RNSI AYFDDPQYR QSS
Sbjct: 567 LAKRRRNRFIIPFPFQSIQERDKELMFPSGISIEIPINGIFRRNSILAYFDDPQYRTQSS 626
Query: 25 GITKYRTI 2
GITKYRTI
Sbjct: 627 GITKYRTI 634
>YP_009141275.1 RNA polymerase beta' subunit (chloroplast) [Lathyrus clymenum]
AIL55800.1 RNA polymerase beta' subunit (chloroplast)
[Lathyrus clymenum]
Length = 1374
Score = 209 bits (532), Expect = 2e-60
Identities = 104/128 (81%), Positives = 110/128 (85%), Gaps = 2/128 (1%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDL 206
K NISNLL SNDQVKHK FNTFGTKE I+DYSIFNQI DH + MYPAIFHDT
Sbjct: 508 KTNISNLLESNDQVKHKFFRFNTFGTKEKGISDYSIFNQIIYTDHSYLMYPAIFHDTFSF 567
Query: 205 LAKRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS 26
LAKRRRNRF+IPFP QSIQERKN+LMSPSGVSIEIPINGIFHRNSIFAYF++PQYRR SS
Sbjct: 568 LAKRRRNRFLIPFPFQSIQERKNKLMSPSGVSIEIPINGIFHRNSIFAYFENPQYRRHSS 627
Query: 25 GITKYRTI 2
GI KYRTI
Sbjct: 628 GIPKYRTI 635
>YP_009138634.1 RNA polymerase beta' subunit (chloroplast) [Lathyrus littoralis]
AIK20928.1 RNA polymerase beta' subunit (chloroplast)
[Lathyrus littoralis]
Length = 1377
Score = 208 bits (529), Expect = 6e-60
Identities = 106/128 (82%), Positives = 109/128 (85%), Gaps = 2/128 (1%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDL 206
K NISNLL NDQVKHKL FNTFGTKE I+DYSIFNQI DH + MYPAIFHDT
Sbjct: 509 KTNISNLLERNDQVKHKLFRFNTFGTKEKWISDYSIFNQIIYTDHSYLMYPAIFHDTFYF 568
Query: 205 LAKRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS 26
LAKRRRNRF+IPFP QSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFD QYRR SS
Sbjct: 569 LAKRRRNRFLIPFPFQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDHLQYRRHSS 628
Query: 25 GITKYRTI 2
GITKYRTI
Sbjct: 629 GITKYRTI 636
>YP_009138406.1 RNA polymerase beta' subunit (chloroplast) [Lathyrus davidii]
AIK20624.1 RNA polymerase beta' subunit (chloroplast)
[Lathyrus davidii]
Length = 1383
Score = 207 bits (527), Expect = 1e-59
Identities = 105/128 (82%), Positives = 109/128 (85%), Gaps = 2/128 (1%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDL 206
K NISNLL NDQVKHKL FNTFGTKE I+DYSIFNQI DH + MYPAIFHDT D
Sbjct: 507 KTNISNLLERNDQVKHKLFRFNTFGTKEKWISDYSIFNQIIYTDHSYLMYPAIFHDTFDF 566
Query: 205 LAKRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS 26
LAKRRRNRF+IPF QSIQERKNELMSPSGVSIEIPINGIFHRN+IFAYFD QYRR SS
Sbjct: 567 LAKRRRNRFLIPFSFQSIQERKNELMSPSGVSIEIPINGIFHRNNIFAYFDHLQYRRHSS 626
Query: 25 GITKYRTI 2
GITKYRTI
Sbjct: 627 GITKYRTI 634
>YP_009109857.1 RNA polymerase beta' subunit (chloroplast) [Trifolium
glanduliferum] AIJ27897.1 RNA polymerase beta' subunit
(chloroplast) [Trifolium glanduliferum]
Length = 1364
Score = 206 bits (525), Expect = 2e-59
Identities = 102/128 (79%), Positives = 109/128 (85%), Gaps = 2/128 (1%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDL 206
KRN SNL VS+D VKHK SF TFGTKE I+DYSIF Q DH H MYPAIFHDT +L
Sbjct: 507 KRNTSNLFVSDDHVKHKFFSFKTFGTKEKGISDYSIFTQTICTDHSHLMYPAIFHDTFNL 566
Query: 205 LAKRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS 26
LAKRRRNRF+IPFP QSIQERKNE+M PSGVSIEIPINGIF+RNSIFAYFDDPQYR+ SS
Sbjct: 567 LAKRRRNRFLIPFPFQSIQERKNEVMPPSGVSIEIPINGIFNRNSIFAYFDDPQYRKHSS 626
Query: 25 GITKYRTI 2
GITKYRTI
Sbjct: 627 GITKYRTI 634
>YP_009138766.1 RNA polymerase beta' subunit (chloroplast) [Lathyrus palustris]
AIK21135.1 RNA polymerase beta' subunit (chloroplast)
[Lathyrus palustris]
Length = 1375
Score = 206 bits (523), Expect = 4e-59
Identities = 105/128 (82%), Positives = 108/128 (84%), Gaps = 2/128 (1%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKHKLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSDL 206
K NISNLL NDQVKHKL FN FGTKE I+DYSIFNQI DH + MYPAIFHDT
Sbjct: 507 KTNISNLLERNDQVKHKLFRFNIFGTKEKWISDYSIFNQIIYTDHSYLMYPAIFHDTFYF 566
Query: 205 LAKRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQSS 26
LAKRRRNRF+IPFP QSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFD QYRR SS
Sbjct: 567 LAKRRRNRFLIPFPFQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDHLQYRRHSS 626
Query: 25 GITKYRTI 2
GITKYRTI
Sbjct: 627 GITKYRTI 634
>AJE72585.1 RNA polymerase beta'' subunit (plastid) [Trifolium repens]
Length = 1368
Score = 206 bits (523), Expect = 4e-59
Identities = 103/129 (79%), Positives = 111/129 (86%), Gaps = 3/129 (2%)
Frame = -3
Query: 379 KRNISNLLVSNDQVKH-KLLSFNTFGTKESRITDYSIFNQI--KDHCHFMYPAIFHDTSD 209
KRN S L VS+D VKH + SFNTFGTKE I++YSIFNQ DH HFMYPAIFHDT +
Sbjct: 507 KRNTSTLFVSDDHVKHNQFFSFNTFGTKEKGISNYSIFNQTICTDHSHFMYPAIFHDTFN 566
Query: 208 LLAKRRRNRFIIPFPLQSIQERKNELMSPSGVSIEIPINGIFHRNSIFAYFDDPQYRRQS 29
LLAKRRRNRF+IPFP QSIQERKNEL+ PSGVS+EIPINGIFH NSIFAYFDDPQYRRQS
Sbjct: 567 LLAKRRRNRFLIPFPFQSIQERKNELIPPSGVSVEIPINGIFHSNSIFAYFDDPQYRRQS 626
Query: 28 SGITKYRTI 2
SGITKYRTI
Sbjct: 627 SGITKYRTI 635