BLASTX nr result

ID: Glycyrrhiza34_contig00022900 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00022900
         (293 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004493243.1 PREDICTED: zinc finger protein VAR3, chloroplasti...    55   1e-06

>XP_004493243.1 PREDICTED: zinc finger protein VAR3, chloroplastic [Cicer
           arietinum]
          Length = 800

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
 Frame = -1

Query: 293 KLKSSQHRHE--------TPKATSSHRNPSFLL*LECSRFLSHVSSADYASAYPAVDVYT 138
           K+K+SQH+ +        T     SH  P F      SRFLSH++SA Y S  P  D + 
Sbjct: 54  KVKASQHQQQHHIHAQTSTSSLAGSHPWPEF------SRFLSHITSAGYTSTIPPADGFP 107

Query: 137 ATEESSRSEPSFCLAFAR 84
           A+ E S++E S CLAFAR
Sbjct: 108 ASGELSQAEVSACLAFAR 125


Top