BLASTX nr result
ID: Glycyrrhiza34_contig00021566
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza34_contig00021566
(273 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP76627.1 Retrovirus-related Pol polyprotein from transposon 17... 47 2e-07
KYP35229.1 Retrovirus-related Pol polyprotein from transposon 17... 44 4e-07
KYP61075.1 Retrovirus-related Pol polyprotein from transposon 17... 45 6e-07
KYP79090.1 Retrovirus-related Pol polyprotein from transposon 17... 47 8e-07
KYP33709.1 Transposon Ty3-G Gag-Pol polyprotein, partial [Cajanu... 47 8e-07
XP_010312928.1 PREDICTED: uncharacterized protein LOC104644559 [... 49 1e-06
KYP37785.1 Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan] 43 1e-06
>KYP76627.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus
cajan]
Length = 708
Score = 47.0 bits (110), Expect(3) = 2e-07
Identities = 19/25 (76%), Positives = 23/25 (92%)
Frame = +3
Query: 198 KEEGSW*FCVDYRALNAITVKVRFP 272
K++GSW FCVDYRALNAIT+K +FP
Sbjct: 600 KKDGSWRFCVDYRALNAITIKEKFP 624
Score = 27.7 bits (60), Expect(3) = 2e-07
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 107 KEVMTEMIKQMLQDGIL 157
KE MT+MIK+ML +GI+
Sbjct: 568 KEAMTQMIKEMLTEGII 584
Score = 26.6 bits (57), Expect(3) = 2e-07
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 9 LHPDLSSLV*KFNIVFSVPQGLPPN 83
+ P+L+ L+ ++ VF P GLPP+
Sbjct: 516 IQPELNQLLHEYARVFQTPTGLPPS 540
>KYP35229.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus
cajan]
Length = 520
Score = 43.9 bits (102), Expect(3) = 4e-07
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +3
Query: 198 KEEGSW*FCVDYRALNAITVKVRFP 272
K+ GSW FCVDYRALN +T+K +FP
Sbjct: 245 KKNGSWHFCVDYRALNVVTIKDKFP 269
Score = 32.3 bits (72), Expect(3) = 4e-07
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 3 SSLHPDLSSLV*KFNIVFSVPQGLPPN 83
S +HP++S ++ F VF +P GLPP+
Sbjct: 160 SPIHPNISQVLYTFPYVFDIPHGLPPS 186
Score = 24.3 bits (51), Expect(3) = 4e-07
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = +2
Query: 107 KEVMTEMIKQMLQDGILS 160
K++MT +I+ ML +GI++
Sbjct: 214 KDIMTNLIQDMLNEGIIT 231
>KYP61075.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus
cajan]
Length = 679
Score = 45.4 bits (106), Expect(3) = 6e-07
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = +3
Query: 198 KEEGSW*FCVDYRALNAITVKVRFP 272
K++GSW FCVDYR+LN+IT+K RFP
Sbjct: 340 KKDGSWRFCVDYRSLNSITIKNRFP 364
Score = 33.5 bits (75), Expect(3) = 6e-07
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 3 SSLHPDLSSLV*KFNIVFSVPQGLPP 80
++LHPDL L+ +F+ VF+ P GLPP
Sbjct: 254 TNLHPDLLKLLEEFHQVFTQPHGLPP 279
Score = 20.8 bits (42), Expect(3) = 6e-07
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 107 KEVMTEMIKQMLQDGIL 157
KE M+ ++ MLQ+GI+
Sbjct: 308 KEAMSTILFNMLQEGIV 324
>KYP79090.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus
cajan]
Length = 664
Score = 46.6 bits (109), Expect(3) = 8e-07
Identities = 19/25 (76%), Positives = 23/25 (92%)
Frame = +3
Query: 198 KEEGSW*FCVDYRALNAITVKVRFP 272
K++GSW FCVDYRALNAIT+K +FP
Sbjct: 246 KKDGSWRFCVDYRALNAITIKDKFP 270
Score = 29.3 bits (64), Expect(3) = 8e-07
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 107 KEVMTEMIKQMLQDGILSLAQALLHHQYSL*RRR 208
KE MT+MIK+ML +GI+ + +L + L +++
Sbjct: 214 KEAMTQMIKEMLTEGIIRPSTSLFSYPVLLVKKK 247
Score = 23.5 bits (49), Expect(3) = 8e-07
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 9 LHPDLSSLV*KFNIVFSVPQGLPPN 83
+ +L+ L+ ++ VF P GLPP+
Sbjct: 162 IQSELTQLLHEYARVFQTPTGLPPS 186
>KYP33709.1 Transposon Ty3-G Gag-Pol polyprotein, partial [Cajanus cajan]
Length = 296
Score = 46.6 bits (109), Expect(3) = 8e-07
Identities = 19/25 (76%), Positives = 23/25 (92%)
Frame = +3
Query: 198 KEEGSW*FCVDYRALNAITVKVRFP 272
K++GSW FCVDYRALNAIT+K +FP
Sbjct: 247 KKDGSWRFCVDYRALNAITIKDKFP 271
Score = 29.3 bits (64), Expect(3) = 8e-07
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 107 KEVMTEMIKQMLQDGILSLAQALLHHQYSL*RRR 208
KE MT+MIK+ML +GI+ + +L + L +++
Sbjct: 215 KEAMTQMIKEMLTEGIIRPSTSLFSYPVLLVKKK 248
Score = 23.5 bits (49), Expect(3) = 8e-07
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 9 LHPDLSSLV*KFNIVFSVPQGLPPN 83
+ +L+ L+ ++ VF P GLPP+
Sbjct: 163 IQSELTQLLHEYARVFQTPTGLPPS 187
>XP_010312928.1 PREDICTED: uncharacterized protein LOC104644559 [Solanum
lycopersicum]
Length = 340
Score = 48.9 bits (115), Expect(3) = 1e-06
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = +3
Query: 195 CKEEGSW*FCVDYRALNAITVKVRFP 272
CK++G+W FCVDYRALNAIT++ RFP
Sbjct: 288 CKKDGTWRFCVDYRALNAITIRDRFP 313
Score = 26.6 bits (57), Expect(3) = 1e-06
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 107 KEVMTEMIKQMLQDGIL 157
K+VM +M+K ML+DG++
Sbjct: 257 KQVMEQMVKDMLKDGVI 273
Score = 23.5 bits (49), Expect(3) = 1e-06
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 18 DLSSLV*KFNIVFSVPQGLPPN 83
+LS L+ ++ VF P GLPP+
Sbjct: 208 NLSGLLESYHDVFRKPTGLPPS 229
>KYP37785.1 Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
Length = 339
Score = 42.7 bits (99), Expect(3) = 1e-06
Identities = 16/24 (66%), Positives = 22/24 (91%)
Frame = +3
Query: 201 EEGSW*FCVDYRALNAITVKVRFP 272
++G+W FCVDY+ALNA+T+K RFP
Sbjct: 181 KDGTWNFCVDYKALNALTIKDRFP 204
Score = 30.8 bits (68), Expect(3) = 1e-06
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Frame = +3
Query: 12 HPDLSSLV*KFNIVFSVPQGLPP-----NHID-TPN 101
HPD+S L+ + VF+ P GLPP +HI TPN
Sbjct: 97 HPDISHLLHSYASVFAKPSGLPPTRPHDHHIPLTPN 132
Score = 25.4 bits (54), Expect(3) = 1e-06
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 107 KEVMTEMIKQMLQDGIL 157
K++MT++I ML DGI+
Sbjct: 148 KDIMTQLISDMLTDGII 164