BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00021469
         (206 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABN08698.1 RNA-directed DNA polymerase ; Ribonuclease H, putativ...    53   2e-07
ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); ...    55   3e-07
GAU50246.1 hypothetical protein TSUD_188980 [Trifolium subterran...    54   1e-06
ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); ...    53   2e-06
ABE80156.1 Ribonuclease H [Medicago truncatula]                        52   6e-06
GAU18899.1 hypothetical protein TSUD_228890 [Trifolium subterran...    52   6e-06
GAU20604.1 hypothetical protein TSUD_33400 [Trifolium subterraneum]    52   6e-06

>ABN08698.1 RNA-directed DNA polymerase ; Ribonuclease H, putative [Medicago
           truncatula]
          Length = 86

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 24/56 (42%), Positives = 30/56 (53%)
 Frame = +2

Query: 26  LIWLVLHDSVPTLSVLHHSGITPTAVCKIPTLSVLHHSGKICQREDETLLHCIRDC 193
           L+WL  H+SVPT+S+L+H  I PTA C              C    ET LHC+ DC
Sbjct: 28  LVWLACHNSVPTISLLNHRNIAPTATC------------SRCNLHVETFLHCVHDC 71


>ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score = 55.5 bits (132), Expect = 3e-07
 Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
 Frame = +2

Query: 5    ETTCPRK---LIWLVLHDSVPTLSVLHHSGITPTAVCKIPTLSVLHHSGKICQREDETLL 175
            + T P K   LIWL  H++ PTLS+LHH  + P A C              C   DE+ L
Sbjct: 982  QLTAPEKYKLLIWLACHNAAPTLSLLHHRKMAPAATC------------SRCGENDESFL 1029

Query: 176  HCIRDC 193
            HC+RDC
Sbjct: 1030 HCVRDC 1035


>GAU50246.1 hypothetical protein TSUD_188980 [Trifolium subterraneum]
          Length = 458

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
 Frame = +2

Query: 2   LETTCPRK---LIWLVLHDSVPTLSVLHHSGITPTAVCKIPTLSVLHHSGKICQREDETL 172
           LE   P K   L WL  H+SVPTLS+LHH  + P++ C              C   +ET 
Sbjct: 144 LELHLPEKIKFLFWLACHNSVPTLSLLHHRRMNPSSNC------------PRCCTHEETF 191

Query: 173 LHCIRDCPCVR 205
           LHC+RDC   R
Sbjct: 192 LHCVRDCDLSR 202


>ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 869

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 25/57 (43%), Positives = 31/57 (54%)
 Frame = +2

Query: 26  LIWLVLHDSVPTLSVLHHSGITPTAVCKIPTLSVLHHSGKICQREDETLLHCIRDCP 196
           LIWL  HDS+PT ++LHH  I  +A C              C   DE++ HCIRDCP
Sbjct: 566 LIWLACHDSLPTAALLHHRQIIASATC------------ARCGVSDESVFHCIRDCP 610


>ABE80156.1 Ribonuclease H [Medicago truncatula]
          Length = 438

 Score = 51.6 bits (122), Expect = 6e-06
 Identities = 25/56 (44%), Positives = 29/56 (51%)
 Frame = +2

Query: 26  LIWLVLHDSVPTLSVLHHSGITPTAVCKIPTLSVLHHSGKICQREDETLLHCIRDC 193
           LIWL   + VPTLS+LH   I P+  C              C  EDET LHC+RDC
Sbjct: 135 LIWLACQNVVPTLSLLHRRNIAPSPTC------------ARCGEEDETFLHCVRDC 178


>GAU18899.1 hypothetical protein TSUD_228890 [Trifolium subterraneum]
          Length = 1098

 Score = 51.6 bits (122), Expect = 6e-06
 Identities = 22/56 (39%), Positives = 30/56 (53%)
 Frame = +2

Query: 26  LIWLVLHDSVPTLSVLHHSGITPTAVCKIPTLSVLHHSGKICQREDETLLHCIRDC 193
           L WL  H++VPTL++LHH  I  + +C              C   +ET LHC+RDC
Sbjct: 796 LFWLACHEAVPTLAMLHHRNIASSPIC------------PRCSNHNETFLHCVRDC 839


>GAU20604.1 hypothetical protein TSUD_33400 [Trifolium subterraneum]
          Length = 1174

 Score = 51.6 bits (122), Expect = 6e-06
 Identities = 24/56 (42%), Positives = 30/56 (53%)
 Frame = +2

Query: 26   LIWLVLHDSVPTLSVLHHSGITPTAVCKIPTLSVLHHSGKICQREDETLLHCIRDC 193
            L WL  HD+VPTLS+LHH  I    +C              C ++ ET LHC+RDC
Sbjct: 871  LFWLSCHDAVPTLSMLHHRNIASCPIC------------TRCGQQIETFLHCVRDC 914