BLASTX nr result
ID: Glycyrrhiza34_contig00020872
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza34_contig00020872
(272 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_014621125.1 PREDICTED: mediator of RNA polymerase II transcri... 77 2e-14
XP_006594323.1 PREDICTED: mediator of RNA polymerase II transcri... 77 2e-14
XP_015943540.1 PREDICTED: mediator of RNA polymerase II transcri... 75 5e-14
XP_016189784.1 PREDICTED: mediator of RNA polymerase II transcri... 75 5e-14
XP_016180961.1 PREDICTED: mediator of RNA polymerase II transcri... 75 7e-14
XP_016180959.1 PREDICTED: mediator of RNA polymerase II transcri... 75 7e-14
XP_015956477.1 PREDICTED: mediator of RNA polymerase II transcri... 75 7e-14
XP_015890204.1 PREDICTED: mediator of RNA polymerase II transcri... 74 3e-13
XP_019425278.1 PREDICTED: mediator of RNA polymerase II transcri... 72 7e-13
XP_019074150.1 PREDICTED: mediator of RNA polymerase II transcri... 72 9e-13
CBI14793.3 unnamed protein product, partial [Vitis vinifera] 72 9e-13
XP_007148189.1 hypothetical protein PHAVU_006G1876000g, partial ... 66 1e-12
XP_014508726.1 PREDICTED: mediator of RNA polymerase II transcri... 72 1e-12
XP_019421369.1 PREDICTED: mediator of RNA polymerase II transcri... 72 1e-12
OIV94349.1 hypothetical protein TanjilG_21689 [Lupinus angustifo... 72 1e-12
XP_015574599.1 PREDICTED: mediator of RNA polymerase II transcri... 71 2e-12
XP_002519035.1 PREDICTED: mediator of RNA polymerase II transcri... 71 2e-12
XP_010647227.1 PREDICTED: mediator of RNA polymerase II transcri... 71 2e-12
XP_007159313.1 hypothetical protein PHAVU_002G227600g [Phaseolus... 69 1e-11
XP_017435676.1 PREDICTED: mediator of RNA polymerase II transcri... 69 1e-11
>XP_014621125.1 PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X2 [Glycine max]
Length = 1103
Score = 77.0 bits (188), Expect = 2e-14
Identities = 47/92 (51%), Positives = 56/92 (60%), Gaps = 9/92 (9%)
Frame = +2
Query: 23 MNQIAGTKEPEEDREGVLCETQGEEVSKGSEKNEAVTVTV-----SGEQE----EKPPVV 175
MNQI GTK+PE + Q ++ K S+K ++ T V S EQE EKPP
Sbjct: 1 MNQIGGTKDPEAEPVSPSLP-QPQDTPKSSDKTDSATAVVVVAAASEEQEVGEEEKPPPP 59
Query: 176 DDPMEQDSVTPATVFRIRLRQPTSNLLHKMSV 271
PME+D V PATVF IRL+QP SNLLHKMSV
Sbjct: 60 PVPMEEDPVNPATVFSIRLKQPRSNLLHKMSV 91
>XP_006594323.1 PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Glycine max] KRH20478.1 hypothetical
protein GLYMA_13G181200 [Glycine max]
Length = 1244
Score = 77.0 bits (188), Expect = 2e-14
Identities = 47/92 (51%), Positives = 56/92 (60%), Gaps = 9/92 (9%)
Frame = +2
Query: 23 MNQIAGTKEPEEDREGVLCETQGEEVSKGSEKNEAVTVTV-----SGEQE----EKPPVV 175
MNQI GTK+PE + Q ++ K S+K ++ T V S EQE EKPP
Sbjct: 1 MNQIGGTKDPEAEPVSPSLP-QPQDTPKSSDKTDSATAVVVVAAASEEQEVGEEEKPPPP 59
Query: 176 DDPMEQDSVTPATVFRIRLRQPTSNLLHKMSV 271
PME+D V PATVF IRL+QP SNLLHKMSV
Sbjct: 60 PVPMEEDPVNPATVFSIRLKQPRSNLLHKMSV 91
>XP_015943540.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16,
partial [Arachis duranensis]
Length = 1092
Score = 75.5 bits (184), Expect = 5e-14
Identities = 47/85 (55%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Frame = +2
Query: 23 MNQIAGTKEPEEDREGVLCETQGEEVSKGSEKNEAVTVTVSGEQEEKPPVVDDPMEQDSV 202
MNQ+ GTK P + V+ + + E V++ EKNEAV + SGEQ++ P V++PME+DSV
Sbjct: 1 MNQVGGTKGPVVE---VVEDEEPEAVAEAQEKNEAVEL--SGEQKQPP--VENPMEEDSV 53
Query: 203 T--PATVFRIRLRQPTSNLLHKMSV 271
T PATVF IRL+QP S LLHKMSV
Sbjct: 54 TTTPATVFCIRLKQPKSLLLHKMSV 78
>XP_016189784.1 PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Arachis ipaensis]
Length = 1245
Score = 75.5 bits (184), Expect = 5e-14
Identities = 43/88 (48%), Positives = 62/88 (70%), Gaps = 5/88 (5%)
Frame = +2
Query: 23 MNQIAGTKEPEEDREGVLCETQGEEVSKGSEKNEAVTVT-----VSGEQEEKPPVVDDPM 187
MNQ+AGT +PE + + ++Q E VSKGSEK+E++TV+ V+ +++ P VD P+
Sbjct: 1 MNQVAGTNDPEGEP---VAQSQ-EPVSKGSEKSESITVSGEDQEVAPPEDKAPMAVDHPI 56
Query: 188 EQDSVTPATVFRIRLRQPTSNLLHKMSV 271
+++ V PATVF I L+Q SNLLHKMSV
Sbjct: 57 DEEPVGPATVFCITLKQTKSNLLHKMSV 84
>XP_016180961.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X2 [Arachis ipaensis]
Length = 1227
Score = 75.1 bits (183), Expect = 7e-14
Identities = 46/85 (54%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Frame = +2
Query: 23 MNQIAGTKEPEEDREGVLCETQGEEVSKGSEKNEAVTVTVSGEQEEKPPVVDDPMEQDSV 202
MNQ+ GTK P + V+ + + E V++ EKNEAV + SGEQ++ P V++PME+D V
Sbjct: 1 MNQVGGTKGPVVE---VVEDEEPEAVAEAQEKNEAVEL--SGEQKQPP--VENPMEEDPV 53
Query: 203 T--PATVFRIRLRQPTSNLLHKMSV 271
T PATVF IRL+QP S+LLHKMSV
Sbjct: 54 TTTPATVFCIRLKQPKSHLLHKMSV 78
>XP_016180959.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Arachis ipaensis]
Length = 1235
Score = 75.1 bits (183), Expect = 7e-14
Identities = 46/85 (54%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Frame = +2
Query: 23 MNQIAGTKEPEEDREGVLCETQGEEVSKGSEKNEAVTVTVSGEQEEKPPVVDDPMEQDSV 202
MNQ+ GTK P + V+ + + E V++ EKNEAV + SGEQ++ P V++PME+D V
Sbjct: 1 MNQVGGTKGPVVE---VVEDEEPEAVAEAQEKNEAVEL--SGEQKQPP--VENPMEEDPV 53
Query: 203 T--PATVFRIRLRQPTSNLLHKMSV 271
T PATVF IRL+QP S+LLHKMSV
Sbjct: 54 TTTPATVFCIRLKQPKSHLLHKMSV 78
>XP_015956477.1 PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Arachis duranensis]
Length = 1245
Score = 75.1 bits (183), Expect = 7e-14
Identities = 43/88 (48%), Positives = 62/88 (70%), Gaps = 5/88 (5%)
Frame = +2
Query: 23 MNQIAGTKEPEEDREGVLCETQGEEVSKGSEKNEAVTVT-----VSGEQEEKPPVVDDPM 187
MNQ+AGT +PE + + ++Q E VSKGSEK+E++TV+ V+ +++ P VD P+
Sbjct: 1 MNQVAGTNDPEGEP---VAQSQ-EPVSKGSEKSESITVSGEDQEVAPPEDKVPMAVDHPI 56
Query: 188 EQDSVTPATVFRIRLRQPTSNLLHKMSV 271
+++ V PATVF I L+Q SNLLHKMSV
Sbjct: 57 DEEPVGPATVFCITLKQTKSNLLHKMSV 84
>XP_015890204.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
[Ziziphus jujuba]
Length = 1239
Score = 73.6 bits (179), Expect = 3e-13
Identities = 45/83 (54%), Positives = 56/83 (67%)
Frame = +2
Query: 23 MNQIAGTKEPEEDREGVLCETQGEEVSKGSEKNEAVTVTVSGEQEEKPPVVDDPMEQDSV 202
MNQ+AG K+ EE+ EVSKGS+K E T++ EKP +DPME+DSV
Sbjct: 1 MNQVAGPKDAEEEPAAQSLV----EVSKGSDKAE--TLSPDEVAVEKP---NDPMEEDSV 51
Query: 203 TPATVFRIRLRQPTSNLLHKMSV 271
+PATVF IRL+QP SNL+HKMSV
Sbjct: 52 SPATVFCIRLKQPRSNLMHKMSV 74
>XP_019425278.1 PREDICTED: mediator of RNA polymerase II transcription subunit
16-like [Lupinus angustifolius] XP_019425279.1
PREDICTED: mediator of RNA polymerase II transcription
subunit 16-like [Lupinus angustifolius] OIV91755.1
hypothetical protein TanjilG_26608 [Lupinus
angustifolius]
Length = 1243
Score = 72.4 bits (176), Expect = 7e-13
Identities = 45/85 (52%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Frame = +2
Query: 23 MNQIAGTKEPEEDREGVLCETQGEEVS--KGSEKNEAVTVTVSGEQEEKPPVVDDPMEQD 196
MNQI K+P+E+ + Q EEVS KGS KN V+ E+E++ V PME+D
Sbjct: 3 MNQIGVPKDPDEEP---VPHPQEEEVSNSKGSLKNNEAIVSSEKEEEKEEEYV--PMEED 57
Query: 197 SVTPATVFRIRLRQPTSNLLHKMSV 271
S+ PATVF IRL QP+SNLLHKMSV
Sbjct: 58 SLKPATVFTIRLNQPSSNLLHKMSV 82
>XP_019074150.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16,
partial [Vitis vinifera]
Length = 509
Score = 72.0 bits (175), Expect = 9e-13
Identities = 46/89 (51%), Positives = 57/89 (64%), Gaps = 6/89 (6%)
Frame = +2
Query: 23 MNQIAGTKEPEEDREGVLCETQGEEVSKGSEKNEAVTVTVS-GEQEEKPPVV-----DDP 184
M+ +G K+ E++ Q EV+KG EK+E V+V GEQEE+ V DDP
Sbjct: 1 MSPGSGAKDSEDEPV-----PQALEVAKGLEKSEVVSVDEEEGEQEEEGEQVVEKTADDP 55
Query: 185 MEQDSVTPATVFRIRLRQPTSNLLHKMSV 271
ME+DSV PATVF IRL+QP SNL HKMSV
Sbjct: 56 MEEDSVNPATVFCIRLKQPRSNLQHKMSV 84
>CBI14793.3 unnamed protein product, partial [Vitis vinifera]
Length = 513
Score = 72.0 bits (175), Expect = 9e-13
Identities = 46/89 (51%), Positives = 57/89 (64%), Gaps = 6/89 (6%)
Frame = +2
Query: 23 MNQIAGTKEPEEDREGVLCETQGEEVSKGSEKNEAVTVTVS-GEQEEKPPVV-----DDP 184
M+ +G K+ E++ Q EV+KG EK+E V+V GEQEE+ V DDP
Sbjct: 1 MSPGSGAKDSEDEPV-----PQALEVAKGLEKSEVVSVDEEEGEQEEEGEQVVEKTADDP 55
Query: 185 MEQDSVTPATVFRIRLRQPTSNLLHKMSV 271
ME+DSV PATVF IRL+QP SNL HKMSV
Sbjct: 56 MEEDSVNPATVFCIRLKQPRSNLQHKMSV 84
>XP_007148189.1 hypothetical protein PHAVU_006G1876000g, partial [Phaseolus
vulgaris] ESW20183.1 hypothetical protein
PHAVU_006G1876000g, partial [Phaseolus vulgaris]
Length = 64
Score = 66.2 bits (160), Expect = 1e-12
Identities = 47/84 (55%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +2
Query: 23 MNQIAGTKEPEEDREGVLCETQGEEVSKGSEK-NEAVTVTVSGEQEEKPPVVDDPMEQDS 199
MNQIA TKEPEE GS+K NEAV S E+E DPMEQ+S
Sbjct: 1 MNQIAATKEPEE----------------GSQKTNEAV----SCEEE-------DPMEQES 33
Query: 200 VTPATVFRIRLRQPTSNLLHKMSV 271
V PATVF IRLRQP SNLL+KMSV
Sbjct: 34 VIPATVFCIRLRQPKSNLLYKMSV 57
>XP_014508726.1 PREDICTED: mediator of RNA polymerase II transcription subunit
16-like [Vigna radiata var. radiata]
Length = 1242
Score = 71.6 bits (174), Expect = 1e-12
Identities = 44/92 (47%), Positives = 55/92 (59%), Gaps = 9/92 (9%)
Frame = +2
Query: 23 MNQIAGTKEPEEDREGVLCETQGEEVSKGSEKNEAVTVTVSGE---------QEEKPPVV 175
MNQI GTK+PE + Q ++ K +K ++ V V+ QEEK PV
Sbjct: 1 MNQIPGTKDPEAEPVAQSLP-QPQDTPKPPDKTDSAAVVVAATTTTEEQEVGQEEKRPV- 58
Query: 176 DDPMEQDSVTPATVFRIRLRQPTSNLLHKMSV 271
PME+DS+ PATVF IRL+QP SNLLHKMSV
Sbjct: 59 --PMEEDSLNPATVFSIRLKQPRSNLLHKMSV 88
>XP_019421369.1 PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Lupinus angustifolius]
XP_019421370.1 PREDICTED: mediator of RNA polymerase II
transcription subunit 16-like isoform X2 [Lupinus
angustifolius] XP_019421371.1 PREDICTED: mediator of RNA
polymerase II transcription subunit 16-like isoform X1
[Lupinus angustifolius]
Length = 1248
Score = 71.6 bits (174), Expect = 1e-12
Identities = 45/94 (47%), Positives = 59/94 (62%), Gaps = 11/94 (11%)
Frame = +2
Query: 23 MNQIA---GTKEPEE------DREGVLCETQGEEVSKGSEKNEAVTVTVSGEQEEKPPVV 175
M QI+ GTK+PE+ D+E VL +G E G E+ V+ E+ ++ P+V
Sbjct: 1 MTQISSSTGTKDPEQEQTLDQDKELVLPNPKGSEPVSGEEQE-----VVASEENKEKPLV 55
Query: 176 DDP--MEQDSVTPATVFRIRLRQPTSNLLHKMSV 271
D P ME++SV PATVF IRL+QP SNLLHKMSV
Sbjct: 56 DQPVPMEEESVNPATVFCIRLKQPNSNLLHKMSV 89
>OIV94349.1 hypothetical protein TanjilG_21689 [Lupinus angustifolius]
Length = 1440
Score = 71.6 bits (174), Expect = 1e-12
Identities = 45/94 (47%), Positives = 59/94 (62%), Gaps = 11/94 (11%)
Frame = +2
Query: 23 MNQIA---GTKEPEE------DREGVLCETQGEEVSKGSEKNEAVTVTVSGEQEEKPPVV 175
M QI+ GTK+PE+ D+E VL +G E G E+ V+ E+ ++ P+V
Sbjct: 1 MTQISSSTGTKDPEQEQTLDQDKELVLPNPKGSEPVSGEEQE-----VVASEENKEKPLV 55
Query: 176 DDP--MEQDSVTPATVFRIRLRQPTSNLLHKMSV 271
D P ME++SV PATVF IRL+QP SNLLHKMSV
Sbjct: 56 DQPVPMEEESVNPATVFCIRLKQPNSNLLHKMSV 89
>XP_015574599.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X2 [Ricinus communis]
Length = 1083
Score = 71.2 bits (173), Expect = 2e-12
Identities = 43/80 (53%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Frame = +2
Query: 38 GTKEPEEDREGVLCETQGEEVSKGSEKNEAVTVTVSGEQE--EKPPVVDDPMEQDSVTPA 211
G KEPEE+ G E V+KG+ ++ VS E++ EKP DDPME+DSV+PA
Sbjct: 18 GNKEPEEESVGQSLEI----VAKGAGSDKPAGEPVSSEEDSVEKP---DDPMEEDSVSPA 70
Query: 212 TVFRIRLRQPTSNLLHKMSV 271
TVF IRL+QP SNL HKMSV
Sbjct: 71 TVFCIRLKQPRSNLQHKMSV 90
>XP_002519035.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Ricinus communis] EEF43246.1 conserved
hypothetical protein [Ricinus communis]
Length = 1255
Score = 71.2 bits (173), Expect = 2e-12
Identities = 43/80 (53%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Frame = +2
Query: 38 GTKEPEEDREGVLCETQGEEVSKGSEKNEAVTVTVSGEQE--EKPPVVDDPMEQDSVTPA 211
G KEPEE+ G E V+KG+ ++ VS E++ EKP DDPME+DSV+PA
Sbjct: 18 GNKEPEEESVGQSLEI----VAKGAGSDKPAGEPVSSEEDSVEKP---DDPMEEDSVSPA 70
Query: 212 TVFRIRLRQPTSNLLHKMSV 271
TVF IRL+QP SNL HKMSV
Sbjct: 71 TVFCIRLKQPRSNLQHKMSV 90
>XP_010647227.1 PREDICTED: mediator of RNA polymerase II transcription subunit 16
[Vitis vinifera]
Length = 1246
Score = 70.9 bits (172), Expect = 2e-12
Identities = 45/89 (50%), Positives = 57/89 (64%), Gaps = 6/89 (6%)
Frame = +2
Query: 23 MNQIAGTKEPEEDREGVLCETQGEEVSKGSEKNEAVTVTVS-GEQEEKPPVV-----DDP 184
M+ +G K+ E++ Q EV+KG EK+E V+V G+QEE+ V DDP
Sbjct: 1 MSPGSGAKDSEDEPV-----PQALEVAKGLEKSEVVSVDEEEGDQEEEGEQVVEKTADDP 55
Query: 185 MEQDSVTPATVFRIRLRQPTSNLLHKMSV 271
ME+DSV PATVF IRL+QP SNL HKMSV
Sbjct: 56 MEEDSVNPATVFCIRLKQPRSNLQHKMSV 84
>XP_007159313.1 hypothetical protein PHAVU_002G227600g [Phaseolus vulgaris]
ESW31307.1 hypothetical protein PHAVU_002G227600g
[Phaseolus vulgaris]
Length = 1241
Score = 68.9 bits (167), Expect = 1e-11
Identities = 42/86 (48%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Frame = +2
Query: 23 MNQIAGTKEPEEDREGVLCETQGEEVSKGSEKNEAVTV---TVSGEQEEKPPVVDDPMEQ 193
MNQI GTK+PE + Q ++ K +K ++ TV T + EQE P PME+
Sbjct: 1 MNQIGGTKDPEAEPVAQSLP-QPQDTPKPPDKTDSATVVAATSTEEQEVGPEEKPVPMEE 59
Query: 194 DSVTPATVFRIRLRQPTSNLLHKMSV 271
D V PATVF IRL+Q SNLLHKMSV
Sbjct: 60 DLVNPATVFSIRLKQSRSNLLHKMSV 85
>XP_017435676.1 PREDICTED: mediator of RNA polymerase II transcription subunit
16-like [Vigna angularis] KOM31061.1 hypothetical
protein LR48_Vigan01g061600 [Vigna angularis] BAT73746.1
hypothetical protein VIGAN_01127000 [Vigna angularis
var. angularis]
Length = 1242
Score = 68.9 bits (167), Expect = 1e-11
Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Frame = +2
Query: 23 MNQIAGTKEPEEDREGVLCETQGEEVSKGSEKNEAVTVTVSGEQ---------EEKPPVV 175
MNQIAGTK+PE + Q ++ K +K ++ V V+ EEK PV
Sbjct: 1 MNQIAGTKDPEAEPVAQSLP-QPQDTPKPPDKTDSAAVVVAATTTTEEKEVGPEEKRPV- 58
Query: 176 DDPMEQDSVTPATVFRIRLRQPTSNLLHKMSV 271
PME+DS+ PA VF IRL+QP SNLLHKMSV
Sbjct: 59 --PMEEDSLNPAIVFSIRLKQPRSNLLHKMSV 88