BLASTX nr result

ID: Glycyrrhiza34_contig00019480 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00019480
         (213 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KRH46936.1 hypothetical protein GLYMA_08G366200 [Glycine max]          57   5e-08
XP_003530916.2 PREDICTED: U11/U12 small nuclear ribonucleoprotei...    57   7e-08
KHN24928.1 U11/U12 small nuclear ribonucleoprotein 35 kDa protei...    57   7e-08
KHN17306.1 U11/U12 small nuclear ribonucleoprotein 35 kDa protei...    52   3e-06
XP_003551845.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...    52   3e-06
GAU37783.1 hypothetical protein TSUD_158640 [Trifolium subterran...    52   6e-06

>KRH46936.1 hypothetical protein GLYMA_08G366200 [Glycine max]
          Length = 248

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = -3

Query: 211 RSSVERSGCYHDRSSAEKEHRYRSSTETDRH 119
           RSS+ERSG YHDRSS+EKEHRYRSST+ D+H
Sbjct: 184 RSSLERSGRYHDRSSSEKEHRYRSSTDKDKH 214


>XP_003530916.2 PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
           [Glycine max] KRH46935.1 hypothetical protein
           GLYMA_08G366200 [Glycine max]
          Length = 327

 Score = 57.0 bits (136), Expect = 7e-08
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = -3

Query: 211 RSSVERSGCYHDRSSAEKEHRYRSSTETDRH 119
           RSS+ERSG YHDRSS+EKEHRYRSST+ D+H
Sbjct: 263 RSSLERSGRYHDRSSSEKEHRYRSSTDKDKH 293


>KHN24928.1 U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Glycine
           soja]
          Length = 348

 Score = 57.0 bits (136), Expect = 7e-08
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = -3

Query: 211 RSSVERSGCYHDRSSAEKEHRYRSSTETDRH 119
           RSS+ERSG YHDRSS+EKEHRYRSST+ D+H
Sbjct: 263 RSSLERSGRYHDRSSSEKEHRYRSSTDKDKH 293


>KHN17306.1 U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Glycine
           soja]
          Length = 347

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 23/31 (74%), Positives = 28/31 (90%)
 Frame = -3

Query: 211 RSSVERSGCYHDRSSAEKEHRYRSSTETDRH 119
           RSS+ERSG YHDRSS+EKEHR+ SST+ D+H
Sbjct: 265 RSSMERSGRYHDRSSSEKEHRHGSSTDKDKH 295


>XP_003551845.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
           protein-like [Glycine max] KRH01744.1 hypothetical
           protein GLYMA_18G296100 [Glycine max]
          Length = 347

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 23/31 (74%), Positives = 28/31 (90%)
 Frame = -3

Query: 211 RSSVERSGCYHDRSSAEKEHRYRSSTETDRH 119
           RSS+ERSG YHDRSS+EKEHR+ SST+ D+H
Sbjct: 265 RSSMERSGRYHDRSSSEKEHRHGSSTDKDKH 295


>GAU37783.1 hypothetical protein TSUD_158640 [Trifolium subterraneum]
          Length = 408

 Score = 51.6 bits (122), Expect = 6e-06
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -3

Query: 211 RSSVERSGCYHDRSSAEKEHRYRSSTETDRH 119
           RSS E+S  YHDRSSAEKE R+RSSTETD+H
Sbjct: 353 RSSSEKSDRYHDRSSAEKERRHRSSTETDKH 383


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