BLASTX nr result
ID: Glycyrrhiza34_contig00018452
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza34_contig00018452
(221 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU33259.1 hypothetical protein TSUD_333820 [Trifolium subterran... 71 6e-13
GAU10400.1 hypothetical protein TSUD_423410, partial [Trifolium ... 71 6e-13
ABN08572.1 RNA-directed DNA polymerase; Ribonuclease H, related ... 57 7e-09
GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterran... 60 1e-08
GAU17063.1 hypothetical protein TSUD_105620 [Trifolium subterran... 59 2e-08
GAU22731.1 hypothetical protein TSUD_138560 [Trifolium subterran... 58 3e-08
GAU22350.1 hypothetical protein TSUD_106780 [Trifolium subterran... 58 5e-08
ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); ... 57 6e-08
GAU25827.1 hypothetical protein TSUD_30910 [Trifolium subterraneum] 57 1e-07
GAU12283.1 hypothetical protein TSUD_141910 [Trifolium subterran... 57 1e-07
GAU35137.1 hypothetical protein TSUD_394630 [Trifolium subterran... 55 3e-07
GAU50246.1 hypothetical protein TSUD_188980 [Trifolium subterran... 53 2e-06
ABE80156.1 Ribonuclease H [Medicago truncatula] 53 3e-06
GAU49954.1 hypothetical protein TSUD_180180 [Trifolium subterran... 53 3e-06
ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); ... 53 3e-06
GAU28886.1 hypothetical protein TSUD_293380 [Trifolium subterran... 52 3e-06
KYP74203.1 Putative ribonuclease H protein At1g65750 family [Caj... 52 5e-06
KYP35629.1 Putative ribonuclease H protein At1g65750 family [Caj... 52 5e-06
GAU40444.1 hypothetical protein TSUD_397630 [Trifolium subterran... 52 6e-06
GAU11845.1 hypothetical protein TSUD_75960 [Trifolium subterraneum] 52 7e-06
>GAU33259.1 hypothetical protein TSUD_333820 [Trifolium subterraneum]
Length = 284
Score = 70.9 bits (172), Expect = 6e-13
Identities = 30/72 (41%), Positives = 42/72 (58%)
Frame = +3
Query: 3 GEEILMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLEGPRFVAGLWYAWC 182
GEE ++HC+RDC +S++IW +LG + F D + GL P F+AGLW+ W
Sbjct: 19 GEETILHCLRDCPISRRIWNSLGFQNSSFFSCSDLELWLRNNSIGLNAPTFLAGLWWNWR 78
Query: 183 ARNAKCIGGEDI 218
ARN C+G I
Sbjct: 79 ARNICCVGNASI 90
>GAU10400.1 hypothetical protein TSUD_423410, partial [Trifolium subterraneum]
Length = 284
Score = 70.9 bits (172), Expect = 6e-13
Identities = 30/72 (41%), Positives = 42/72 (58%)
Frame = +3
Query: 3 GEEILMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLEGPRFVAGLWYAWC 182
GEE ++HC+RDC +S++IW +LG + F D + GL P F+AGLW+ W
Sbjct: 13 GEETILHCLRDCPISRRIWNSLGFQNSSFFSCSDLELWLRNNSIGLNAPTFLAGLWWNWR 72
Query: 183 ARNAKCIGGEDI 218
ARN C+G I
Sbjct: 73 ARNIFCVGNASI 84
>ABN08572.1 RNA-directed DNA polymerase; Ribonuclease H, related [Medicago
truncatula]
Length = 121
Score = 57.4 bits (137), Expect = 7e-09
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +3
Query: 6 EEILMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLEGPRFVAGLWYAWCA 185
EE ++HC+RDC + +W LG ++ F + + +G F+AG W+ W A
Sbjct: 14 EEFILHCIRDCPFAMNLWKTLGFINVNFFSNMNLLDWIKSHSNGSAANIFLAGFWWNWKA 73
Query: 186 RNAKCIGGEDI 218
RN C+G + I
Sbjct: 74 RNIVCVGNDSI 84
>GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterraneum]
Length = 545
Score = 59.7 bits (143), Expect = 1e-08
Identities = 25/71 (35%), Positives = 38/71 (53%)
Frame = +3
Query: 6 EEILMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLEGPRFVAGLWYAWCA 185
EE +HC+R+C K+ W A+G F Q + + ++DG F+A +W+ WCA
Sbjct: 277 EESTLHCLRNCEFIKRFWKAIGFLGQTFFQGDNLNDWLRNSIDGPSSFLFMAAVWWIWCA 336
Query: 186 RNAKCIGGEDI 218
RN C+ E I
Sbjct: 337 RNQLCMDNEAI 347
>GAU17063.1 hypothetical protein TSUD_105620 [Trifolium subterraneum]
Length = 440
Score = 58.9 bits (141), Expect = 2e-08
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = +3
Query: 6 EEILMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLEGPRFVAGLWYAWCA 185
EE +MHC+RDC K +W +G T F + + ++ D F+A LW+ W A
Sbjct: 172 EETIMHCLRDCEFVKHLWKTIGFTDQTFFHGDNLYAWLRKGCDSPSMFMFLAALWWIWRA 231
Query: 186 RNAKCIGGE 212
RN C+ E
Sbjct: 232 RNKLCLANE 240
>GAU22731.1 hypothetical protein TSUD_138560 [Trifolium subterraneum]
Length = 385
Score = 58.2 bits (139), Expect = 3e-08
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = +3
Query: 6 EEILMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLEGPRFVAGLWYAWCA 185
EE MHC+RDC K +W +G T F Q + + ++ D F+A +W+ W A
Sbjct: 261 EETTMHCLRDCEFIKHLWKTIGYTDQTFFQGDNLYAWLRKGCDSPSMFMFLAAVWWIWRA 320
Query: 186 RNAKCIGGE 212
RN C+ E
Sbjct: 321 RNKLCLANE 329
>GAU22350.1 hypothetical protein TSUD_106780 [Trifolium subterraneum]
Length = 1200
Score = 57.8 bits (138), Expect = 5e-08
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +3
Query: 9 EILMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLEGPRFVAGLWYAWCAR 188
E +HC+RDC +IW ++G F Q D + L+ F+AG+W+ W AR
Sbjct: 988 ETTIHCLRDCDFVNRIWKSIGFLDQNFFQGVDVYAWLHNGLNSPTMMLFIAGIWWIWRAR 1047
Query: 189 NAKCIGGE 212
NA C+ E
Sbjct: 1048 NAMCLDSE 1055
>ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 869
Score = 57.4 bits (137), Expect = 6e-08
Identities = 26/71 (36%), Positives = 38/71 (53%)
Frame = +3
Query: 6 EEILMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLEGPRFVAGLWYAWCA 185
+E + HC+RDC SK IW +G + F D + L G + F AGLW+ W +
Sbjct: 599 DESVFHCIRDCPFSKIIWHHIGFSEPYFFAVTDIEIWCKSGLIGSKAILFAAGLWWIWRS 658
Query: 186 RNAKCIGGEDI 218
RNA+C+ E +
Sbjct: 659 RNARCMSEESM 669
>GAU25827.1 hypothetical protein TSUD_30910 [Trifolium subterraneum]
Length = 592
Score = 56.6 bits (135), Expect = 1e-07
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +3
Query: 6 EEILMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLEGPRFVAGLWYAWCA 185
+E +HC+RDC ++ +W +G +M+F D + + G + F G+W++W
Sbjct: 346 DESFLHCIRDCEFARSLWNHIGFNNMDFFSNMDVYDWLKLGATGSQTTTFSTGVWWSWRH 405
Query: 186 RNAKCIGGED 215
RN C+ E+
Sbjct: 406 RNLMCLNNEN 415
>GAU12283.1 hypothetical protein TSUD_141910 [Trifolium subterraneum]
Length = 1049
Score = 56.6 bits (135), Expect = 1e-07
Identities = 24/70 (34%), Positives = 39/70 (55%)
Frame = +3
Query: 9 EILMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLEGPRFVAGLWYAWCAR 188
E +HC+RDC ++ IW ++G +++ F Q D + + L F+A +W+ W AR
Sbjct: 782 ETTLHCLRDCDFAQSIWKSIGFSNLNFFQGDDPYVWIRNGLHCSSMFLFMATIWWIWRAR 841
Query: 189 NAKCIGGEDI 218
NA C+ E I
Sbjct: 842 NALCLNSESI 851
>GAU35137.1 hypothetical protein TSUD_394630 [Trifolium subterraneum]
Length = 547
Score = 55.5 bits (132), Expect = 3e-07
Identities = 25/71 (35%), Positives = 38/71 (53%)
Frame = +3
Query: 9 EILMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLEGPRFVAGLWYAWCAR 188
E +HC+RDC + IW ++G + + F Q D + + L F+A +W+ W AR
Sbjct: 336 ETTLHCLRDCDFVQIIWKSIGFSDLNFFQEDDSYDWLRNGLSFPSMFIFLAAVWWIWRAR 395
Query: 189 NAKCIGGEDIP 221
NA C+ E IP
Sbjct: 396 NALCLNSELIP 406
>GAU50246.1 hypothetical protein TSUD_188980 [Trifolium subterraneum]
Length = 458
Score = 53.1 bits (126), Expect = 2e-06
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = +3
Query: 6 EEILMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLEGPRFVAGLWYAWCA 185
EE +HCVRDC LS+ IW LG + +F + D + G + F +W+AW
Sbjct: 188 EETFLHCVRDCDLSRPIWHRLGFITPDFFSSSDAHEWLKFGSTGSQAFAFSTSVWWAWRH 247
Query: 186 RNAKCIGGE 212
+N C+ E
Sbjct: 248 QNLMCLQNE 256
>ABE80156.1 Ribonuclease H [Medicago truncatula]
Length = 438
Score = 52.8 bits (125), Expect = 3e-06
Identities = 24/69 (34%), Positives = 33/69 (47%)
Frame = +3
Query: 6 EEILMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLEGPRFVAGLWYAWCA 185
+E +HCVRDC S+ IW +G T +F A + + F GLW+AW
Sbjct: 168 DETFLHCVRDCHFSRSIWQKIGFTGNDFFTATSAHDWFKIGMSSSLPDIFFGGLWWAWRH 227
Query: 186 RNAKCIGGE 212
RN C+ E
Sbjct: 228 RNLMCLNNE 236
>GAU49954.1 hypothetical protein TSUD_180180 [Trifolium subterraneum]
Length = 968
Score = 52.8 bits (125), Expect = 3e-06
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +3
Query: 6 EEILMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLEGPRFVAGLWYAWCA 185
+E +HC+RDC S+ +W +G T+ F D + + G + F AG+W++W
Sbjct: 698 DESFLHCIRDCDFSRSLWHHIGFTNPNFFSNMDVYDWLKMGATGTQSLIFSAGVWWSWRH 757
Query: 186 RNAKCIGGE 212
RN + E
Sbjct: 758 RNLMSLNNE 766
>ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1296
Score = 52.8 bits (125), Expect = 3e-06
Identities = 25/72 (34%), Positives = 33/72 (45%)
Frame = +3
Query: 6 EEILMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLEGPRFVAGLWYAWCA 185
+E +HCVRDC S IW LG + F + G F+AGLW++W
Sbjct: 1025 DESFLHCVRDCKHSAAIWHKLGFVTAAFFSVSSVQDWIRNFSSGSRAITFLAGLWWSWRH 1084
Query: 186 RNAKCIGGEDIP 221
RN C+ E P
Sbjct: 1085 RNLMCLSNETWP 1096
>GAU28886.1 hypothetical protein TSUD_293380 [Trifolium subterraneum]
Length = 286
Score = 52.4 bits (124), Expect = 3e-06
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 6 EEILMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLE--GPRFVAGLWYAW 179
EE +HCVRDC LS+ IW LG + +F D + G + F AG+W+AW
Sbjct: 14 EETFLHCVRDCDLSRPIWHHLGFITPDFFSLSDAHEWLKFGSTGSQAFAFSFSAGVWWAW 73
Query: 180 CARNAKCIGGE 212
RN C+ E
Sbjct: 74 RHRNLMCLQNE 84
>KYP74203.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 611
Score = 52.0 bits (123), Expect = 5e-06
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +3
Query: 9 EILMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLEGPRFVAGLWYAWCAR 188
E ++HC+RDC SK +W G +++ F + T QR ++ + +F+A +W+ W R
Sbjct: 342 ESVLHCMRDCKYSKALWLQFGFSNINFFN-HEVRTWIQRGVNSAQCSKFLAVMWWTWRWR 400
Query: 189 NAKCIGGED 215
N +GGE+
Sbjct: 401 NMDVLGGEE 409
>KYP35629.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 1411
Score = 52.0 bits (123), Expect = 5e-06
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +3
Query: 9 EILMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLEGPRFVAGLWYAWCAR 188
E ++HC+RDC SK +W G +++ F + T QR ++ + +F+A +W+ W R
Sbjct: 1142 ESVLHCMRDCKYSKALWLQFGFSNINFFN-HEVRTWIQRGVNSAQCSKFLAVMWWTWRWR 1200
Query: 189 NAKCIGGED 215
N +GGE+
Sbjct: 1201 NMDVLGGEE 1209
>GAU40444.1 hypothetical protein TSUD_397630 [Trifolium subterraneum]
Length = 275
Score = 51.6 bits (122), Expect = 6e-06
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = +3
Query: 6 EEILMHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLEGPRFVAGLWYAWCA 185
+E +HCVRDC S+ IW +G F D ++ G + F AG+W+AW
Sbjct: 5 KETFLHCVRDCDFSRNIWHHIGFNDPTFFSFTDAREWRKVGSTGSQAYTFSAGVWWAWRH 64
Query: 186 RNAKCIGGE 212
RN C+ +
Sbjct: 65 RNWMCLNND 73
>GAU11845.1 hypothetical protein TSUD_75960 [Trifolium subterraneum]
Length = 386
Score = 51.6 bits (122), Expect = 7e-06
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +3
Query: 18 MHCVRDCTLSKQIWGALGMTSMEFQQAQDFFTRQQRALDGLEGPRFVAGLWYAWCARNAK 197
+HC+RDC IW +LG T F Q D + + L F+A +W+ W RNA
Sbjct: 176 LHCLRDCDFVYTIWKSLGFTDHNFFQEVDSSSWLRNGLSCSSMFLFMAAIWWIWRTRNAL 235
Query: 198 CIGGEDIP 221
C+ E +P
Sbjct: 236 CLDNELVP 243