BLASTX nr result

ID: Glycyrrhiza34_contig00017350 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00017350
         (206 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KOF75005.1 hypothetical protein OCBIM_22035411mg, partial [Octop...    50   4e-06
XP_005932023.1 PREDICTED: sarcoplasmic reticulum histidine-rich ...    52   6e-06
XP_014192170.1 PREDICTED: transcription initiation factor TFIID ...    52   6e-06
KOF64151.1 hypothetical protein OCBIM_22010023mg, partial [Octop...    49   7e-06
AIU56006.1 pre-mRNA-splicing factor ATP-dependent RNA helicase P...    49   8e-06

>KOF75005.1 hypothetical protein OCBIM_22035411mg, partial [Octopus
           bimaculoides]
          Length = 125

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = -1

Query: 185 NYHHSIQNSHFRIHSHRQRELNSS--NYHHSIQNSHFQIHSHHQRELNSSNYHHSIQNSH 12
           +YHHS Q+ H   H+H     +    +YHH   N H+  H HH  + + SN+H    ++ 
Sbjct: 35  HYHHSYQHKHHHHHNHNHHHHHQHYHDYHHHYYNLHYHHHHHHHNQYHYSNHHQVYHHNT 94

Query: 11  FQ 6
           F+
Sbjct: 95  FR 96


>XP_005932023.1 PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding
           protein-like isoform X2 [Haplochromis burtoni]
          Length = 771

 Score = 51.6 bits (122), Expect = 6e-06
 Identities = 21/65 (32%), Positives = 37/65 (56%)
 Frame = -1

Query: 206 QRELKSSNYHHSIQNSHFRIHSHRQRELNSSNYHHSIQNSHFQIHSHHQRELNSSNYHHS 27
           Q +  S ++HH  ++ H   H H  R+ +S ++HH  Q  H Q H HH  + +S ++HH 
Sbjct: 328 QGDHDSPDHHHHHKDHHSPDHQHHHRDHHSPDHHHHHQEDHSQGHHHHHGDNHSPDHHHH 387

Query: 26  IQNSH 12
            +++H
Sbjct: 388 HKDNH 392


>XP_014192170.1 PREDICTED: transcription initiation factor TFIID subunit 1-like
           isoform X1 [Haplochromis burtoni]
          Length = 1049

 Score = 51.6 bits (122), Expect = 6e-06
 Identities = 21/65 (32%), Positives = 37/65 (56%)
 Frame = -1

Query: 206 QRELKSSNYHHSIQNSHFRIHSHRQRELNSSNYHHSIQNSHFQIHSHHQRELNSSNYHHS 27
           Q +  S ++HH  ++ H   H H  R+ +S ++HH  Q  H Q H HH  + +S ++HH 
Sbjct: 328 QGDHDSPDHHHHHKDHHSPDHQHHHRDHHSPDHHHHHQEDHSQGHHHHHGDNHSPDHHHH 387

Query: 26  IQNSH 12
            +++H
Sbjct: 388 HKDNH 392


>KOF64151.1 hypothetical protein OCBIM_22010023mg, partial [Octopus
           bimaculoides]
          Length = 78

 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 19/60 (31%), Positives = 40/60 (66%)
 Frame = -1

Query: 191 SSNYHHSIQNSHFRIHSHRQRELNSSNYHHSIQNSHFQIHSHHQRELNSSNYHHSIQNSH 12
           ++NY+H   N+H R  +H      ++NY+H+  N+H + ++H++ + N++NY+H+  N+H
Sbjct: 11  NTNYNHKRSNNHNRTDNH------NTNYNHNRSNNHNRTNNHNRTDNNNTNYNHNKTNNH 64


>AIU56006.1 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, partial
           [Plasmodium falciparum] AIU56007.1 pre-mRNA-splicing
           factor ATP-dependent RNA helicase PRP22, partial
           [Plasmodium falciparum] AIU56008.1 pre-mRNA-splicing
           factor ATP-dependent RNA helicase PRP22, partial
           [Plasmodium falciparum] AIU56009.1 pre-mRNA-splicing
           factor ATP-dependent RNA helicase PRP22, partial
           [Plasmodium falciparum] AIU56010.1 pre-mRNA-splicing
           factor ATP-dependent RNA helicase PRP22, partial
           [Plasmodium falciparum] AIU56011.1 pre-mRNA-splicing
           factor ATP-dependent RNA helicase PRP22, partial
           [Plasmodium falciparum]
          Length = 102

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 19/60 (31%), Positives = 35/60 (58%)
 Frame = -1

Query: 191 SSNYHHSIQNSHFRIHSHRQRELNSSNYHHSIQNSHFQIHSHHQRELNSSNYHHSIQNSH 12
           S  +HHS ++ H + H H  +  +S+++HHS  + H + H H     +S ++HHS ++ H
Sbjct: 19  SKEHHHSNKHRHSKEHHHSNKHHHSNDHHHSNDHHHSKDHHHSNDHHHSKDHHHSNKHHH 78


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