BLASTX nr result

ID: Glycyrrhiza34_contig00016459 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00016459
         (375 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU19675.1 hypothetical protein TSUD_77990 [Trifolium subterraneum]    45   7e-08
XP_012572227.1 PREDICTED: RNA-binding protein 39 [Cicer arietinum]     41   8e-07

>GAU19675.1 hypothetical protein TSUD_77990 [Trifolium subterraneum]
          Length = 167

 Score = 45.1 bits (105), Expect(2) = 7e-08
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = +2

Query: 257 DGEDRRSKRSRGDDENGSKK 316
           DGEDRRSKRSRGDDENGSKK
Sbjct: 49  DGEDRRSKRSRGDDENGSKK 68



 Score = 38.9 bits (89), Expect(2) = 7e-08
 Identities = 21/45 (46%), Positives = 21/45 (46%)
 Frame = +3

Query: 93  MDFDEYEYLEKTVEXXXXXXXXXXXXXXXXXXXXXXXXYRKRDVD 227
           MDFDEYEYLEKTVE                        YRKRDVD
Sbjct: 1   MDFDEYEYLEKTVEDLPEDKDSSKKKKTDTADNKSERTYRKRDVD 45


>XP_012572227.1 PREDICTED: RNA-binding protein 39 [Cicer arietinum]
          Length = 570

 Score = 41.2 bits (95), Expect(2) = 8e-07
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +2

Query: 257 DGEDRRSKRSRGDDENGSKK 316
           D EDRRSKRSRGD+ENGSKK
Sbjct: 49  DAEDRRSKRSRGDEENGSKK 68



 Score = 38.9 bits (89), Expect(2) = 8e-07
 Identities = 21/45 (46%), Positives = 21/45 (46%)
 Frame = +3

Query: 93  MDFDEYEYLEKTVEXXXXXXXXXXXXXXXXXXXXXXXXYRKRDVD 227
           MDFDEYEYLEKTVE                        YRKRDVD
Sbjct: 1   MDFDEYEYLEKTVEELPEDRDSSKKKKTDIVDNKSERTYRKRDVD 45


Top