BLASTX nr result
ID: Glycyrrhiza34_contig00012686
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza34_contig00012686
(367 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_004494285.1 PREDICTED: pentatricopeptide repeat-containing pr... 107 1e-24
XP_003553630.1 PREDICTED: pentatricopeptide repeat-containing pr... 105 5e-24
XP_014495031.1 PREDICTED: pentatricopeptide repeat-containing pr... 97 3e-21
XP_007163011.1 hypothetical protein PHAVU_001G198600g [Phaseolus... 97 5e-21
XP_017417464.1 PREDICTED: pentatricopeptide repeat-containing pr... 96 1e-20
XP_016162907.1 PREDICTED: pentatricopeptide repeat-containing pr... 94 4e-20
XP_015969246.1 PREDICTED: pentatricopeptide repeat-containing pr... 94 6e-20
XP_017629789.1 PREDICTED: pentatricopeptide repeat-containing pr... 86 5e-17
XP_016722518.1 PREDICTED: pentatricopeptide repeat-containing pr... 86 5e-17
XP_012435013.1 PREDICTED: pentatricopeptide repeat-containing pr... 86 5e-17
XP_010058731.1 PREDICTED: pentatricopeptide repeat-containing pr... 85 1e-16
XP_016709000.1 PREDICTED: pentatricopeptide repeat-containing pr... 84 2e-16
XP_007029178.2 PREDICTED: pentatricopeptide repeat-containing pr... 84 2e-16
EOY09680.1 Pentatricopeptide repeat (PPR) superfamily protein [T... 84 2e-16
XP_002267596.1 PREDICTED: pentatricopeptide repeat-containing pr... 82 8e-16
XP_014629415.1 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide... 81 2e-15
XP_010248175.1 PREDICTED: pentatricopeptide repeat-containing pr... 79 7e-15
OAO96373.1 hypothetical protein AXX17_AT5G06130 [Arabidopsis tha... 75 3e-13
JAT45101.1 Pentatricopeptide repeat-containing protein At5g06540... 75 3e-13
ABE66133.1 pentatricopeptide repeat-containing protein [Arabidop... 73 3e-13
>XP_004494285.1 PREDICTED: pentatricopeptide repeat-containing protein At5g06540
[Cicer arietinum]
Length = 618
Score = 107 bits (266), Expect = 1e-24
Identities = 50/62 (80%), Positives = 54/62 (87%)
Frame = -3
Query: 188 SNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVAFCIDSPNSL 9
SN ILQKLRLKNPKLVL QCSN++DLKIIHAHMLRTH FFD FA+SRI+AFCID PN L
Sbjct: 5 SNPILQKLRLKNPKLVLLSQCSNIQDLKIIHAHMLRTHFFFDTFASSRIIAFCIDKPNFL 64
Query: 8 GY 3
Y
Sbjct: 65 TY 66
>XP_003553630.1 PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max] KHN43589.1
Pentatricopeptide repeat-containing protein [Glycine
soja] KRG96309.1 hypothetical protein GLYMA_19G202500
[Glycine max]
Length = 622
Score = 105 bits (262), Expect = 5e-24
Identities = 52/66 (78%), Positives = 57/66 (86%)
Frame = -3
Query: 206 MSSSVASNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVAFCI 27
MS + SNSIL+ LRLKNPKLVL E CSN RDLKIIHAHMLRTHLFFDVFAASR++AFCI
Sbjct: 1 MSITSGSNSILKTLRLKNPKLVLLECCSNARDLKIIHAHMLRTHLFFDVFAASRLIAFCI 60
Query: 26 DSPNSL 9
DS +L
Sbjct: 61 DSTTNL 66
>XP_014495031.1 PREDICTED: pentatricopeptide repeat-containing protein At5g06540
[Vigna radiata var. radiata]
Length = 622
Score = 97.4 bits (241), Expect = 3e-21
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = -3
Query: 206 MSSSVASNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVAFCI 27
MS + SNSIL+KLRLKNPKLVL E C ++ DLKI+HAH+LRTHLFFDVF ASR+VAFCI
Sbjct: 1 MSYNNGSNSILKKLRLKNPKLVLLESCCSVEDLKIVHAHLLRTHLFFDVFVASRLVAFCI 60
Query: 26 DSPNSL 9
S +L
Sbjct: 61 HSTANL 66
>XP_007163011.1 hypothetical protein PHAVU_001G198600g [Phaseolus vulgaris]
ESW35005.1 hypothetical protein PHAVU_001G198600g
[Phaseolus vulgaris]
Length = 622
Score = 97.1 bits (240), Expect = 5e-21
Identities = 47/66 (71%), Positives = 54/66 (81%)
Frame = -3
Query: 206 MSSSVASNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVAFCI 27
MS S SN IL+ LRLKNPKLVL E+C N+ DLKI+HAH LRTHLFFDVF ASR+VAFCI
Sbjct: 1 MSYSSGSNLILKTLRLKNPKLVLLERCCNVGDLKIVHAHFLRTHLFFDVFVASRLVAFCI 60
Query: 26 DSPNSL 9
+S +L
Sbjct: 61 ESTTNL 66
>XP_017417464.1 PREDICTED: pentatricopeptide repeat-containing protein At5g06540
[Vigna angularis] KOM39547.1 hypothetical protein
LR48_Vigan03g292900 [Vigna angularis]
Length = 622
Score = 95.9 bits (237), Expect = 1e-20
Identities = 45/66 (68%), Positives = 54/66 (81%)
Frame = -3
Query: 206 MSSSVASNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVAFCI 27
MS + SNSIL+ LRLKNPKLVL E C ++ DLKI+HAH+LRTHLFFDVF ASR+VAFC+
Sbjct: 1 MSYNSGSNSILKTLRLKNPKLVLLESCCSVEDLKIVHAHLLRTHLFFDVFVASRLVAFCV 60
Query: 26 DSPNSL 9
S +L
Sbjct: 61 HSTTNL 66
>XP_016162907.1 PREDICTED: pentatricopeptide repeat-containing protein At5g06540
[Arachis ipaensis]
Length = 619
Score = 94.4 bits (233), Expect = 4e-20
Identities = 45/61 (73%), Positives = 50/61 (81%)
Frame = -3
Query: 191 ASNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVAFCIDSPNS 12
ASNS+L+ LRLKNPKLVL E CSNL DL IIHAHMLRTH FFDVFA SR++A C DS +
Sbjct: 4 ASNSVLKTLRLKNPKLVLLESCSNLIDLTIIHAHMLRTHFFFDVFAVSRLIALCTDSNKN 63
Query: 11 L 9
L
Sbjct: 64 L 64
>XP_015969246.1 PREDICTED: pentatricopeptide repeat-containing protein At5g06540
[Arachis duranensis]
Length = 619
Score = 94.0 bits (232), Expect = 6e-20
Identities = 44/61 (72%), Positives = 50/61 (81%)
Frame = -3
Query: 191 ASNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVAFCIDSPNS 12
ASNS+L+ LRLKNPKLVL E CSNL DL I+HAHMLRTH FFDVFA SR++A C DS +
Sbjct: 4 ASNSVLKTLRLKNPKLVLLESCSNLIDLTIVHAHMLRTHFFFDVFAVSRLIALCTDSNKN 63
Query: 11 L 9
L
Sbjct: 64 L 64
>XP_017629789.1 PREDICTED: pentatricopeptide repeat-containing protein At5g06540
[Gossypium arboreum]
Length = 624
Score = 85.5 bits (210), Expect = 5e-17
Identities = 38/65 (58%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Frame = -3
Query: 206 MSSSV-ASNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVAFC 30
M+SS+ SN +L LRLKNPKL+L E C+NL LKIIH +M+RTH+ FD+FAASR+++ C
Sbjct: 1 MNSSINISNKVLNTLRLKNPKLLLLESCNNLSQLKIIHGYMIRTHIIFDIFAASRLISLC 60
Query: 29 IDSPN 15
I++P+
Sbjct: 61 INNPS 65
>XP_016722518.1 PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Gossypium hirsutum]
Length = 624
Score = 85.5 bits (210), Expect = 5e-17
Identities = 38/65 (58%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Frame = -3
Query: 206 MSSSV-ASNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVAFC 30
M+SS+ SN +L LRLKNPKL+L E C+NL LKIIH +M+RTH+ FD+FAASR+++ C
Sbjct: 1 MNSSINISNKVLNTLRLKNPKLLLLESCNNLSQLKIIHGYMIRTHIIFDIFAASRLISLC 60
Query: 29 IDSPN 15
I++P+
Sbjct: 61 INNPS 65
>XP_012435013.1 PREDICTED: pentatricopeptide repeat-containing protein At5g06540
[Gossypium raimondii] KJB46367.1 hypothetical protein
B456_007G363000 [Gossypium raimondii]
Length = 624
Score = 85.5 bits (210), Expect = 5e-17
Identities = 38/65 (58%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Frame = -3
Query: 206 MSSSV-ASNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVAFC 30
M+SS+ SN +L LRLKNPKL+L E C+NL LKIIH +M+RTH+ FD+FAASR+++ C
Sbjct: 1 MNSSINISNKVLNTLRLKNPKLLLLESCNNLSQLKIIHGYMIRTHIIFDIFAASRLISLC 60
Query: 29 IDSPN 15
I++P+
Sbjct: 61 INNPS 65
>XP_010058731.1 PREDICTED: pentatricopeptide repeat-containing protein At5g06540
[Eucalyptus grandis]
Length = 624
Score = 84.7 bits (208), Expect = 1e-16
Identities = 38/57 (66%), Positives = 46/57 (80%)
Frame = -3
Query: 188 SNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVAFCIDSP 18
S+SIL+ LRLKNPKL+L E CSNL DLKIIH HM+RTHL DVF SR++A C+ +P
Sbjct: 5 SSSILKTLRLKNPKLLLLESCSNLSDLKIIHGHMVRTHLVLDVFVTSRLIALCVGTP 61
>XP_016709000.1 PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Gossypium hirsutum]
Length = 624
Score = 83.6 bits (205), Expect = 2e-16
Identities = 37/65 (56%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
Frame = -3
Query: 206 MSSSV-ASNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVAFC 30
M+SS+ SN +L LRLKNP L+L E C+NL LKIIH +M+RTH+ FD+FAASR+++ C
Sbjct: 1 MNSSINISNKVLNTLRLKNPNLLLLESCNNLSQLKIIHGYMIRTHIIFDIFAASRLISLC 60
Query: 29 IDSPN 15
I++P+
Sbjct: 61 INNPS 65
>XP_007029178.2 PREDICTED: pentatricopeptide repeat-containing protein At5g06540
[Theobroma cacao]
Length = 626
Score = 83.6 bits (205), Expect = 2e-16
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = -3
Query: 203 SSSVASNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVAFCID 24
S+S +S+ +L LRLKNPKL+L E C NL LKIIH HM+RTH+ FD+FAASR+++ C D
Sbjct: 5 SNSSSSSKVLNTLRLKNPKLLLLESCKNLSQLKIIHGHMIRTHIIFDIFAASRLISLCTD 64
>EOY09680.1 Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 626
Score = 83.6 bits (205), Expect = 2e-16
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = -3
Query: 203 SSSVASNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVAFCID 24
S+S +S+ +L LRLKNPKL+L E C NL LKIIH HM+RTH+ FD+FAASR+++ C D
Sbjct: 5 SNSSSSSKVLNTLRLKNPKLLLLESCKNLSQLKIIHGHMIRTHIIFDIFAASRLISLCTD 64
>XP_002267596.1 PREDICTED: pentatricopeptide repeat-containing protein At5g06540
[Vitis vinifera]
Length = 623
Score = 82.0 bits (201), Expect = 8e-16
Identities = 38/61 (62%), Positives = 48/61 (78%)
Frame = -3
Query: 206 MSSSVASNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVAFCI 27
MSSS +S+ + LRLKNPKL E CS+L LKIIHA+M+RTH+ DVFAASR++AFC+
Sbjct: 1 MSSSSIGSSVFKTLRLKNPKLFSLETCSDLTHLKIIHAYMIRTHIICDVFAASRLIAFCV 60
Query: 26 D 24
D
Sbjct: 61 D 61
>XP_014629415.1 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g06540 [Glycine max]
Length = 616
Score = 80.9 bits (198), Expect = 2e-15
Identities = 43/66 (65%), Positives = 49/66 (74%)
Frame = -3
Query: 206 MSSSVASNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVAFCI 27
MS + SNSIL+ LRLKN LVL CSN+ DLKIIHA HLFFDVFAASR++AFCI
Sbjct: 1 MSITSGSNSILKSLRLKNHNLVLLSXCSNVGDLKIIHA-----HLFFDVFAASRLIAFCI 55
Query: 26 DSPNSL 9
DS +L
Sbjct: 56 DSTTNL 61
>XP_010248175.1 PREDICTED: pentatricopeptide repeat-containing protein At5g06540
[Nelumbo nucifera]
Length = 629
Score = 79.3 bits (194), Expect = 7e-15
Identities = 35/62 (56%), Positives = 49/62 (79%)
Frame = -3
Query: 215 CWEMSSSVASNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVA 36
C S+S S+ +++ LRLKNPKL+L E CSN+ LK+IHA+M+RTH+ D+FAASR++A
Sbjct: 4 CSSSSNSGISSYVVRTLRLKNPKLLLLETCSNISHLKVIHAYMIRTHIITDLFAASRLIA 63
Query: 35 FC 30
FC
Sbjct: 64 FC 65
>OAO96373.1 hypothetical protein AXX17_AT5G06130 [Arabidopsis thaliana]
Length = 622
Score = 74.7 bits (182), Expect = 3e-13
Identities = 37/68 (54%), Positives = 44/68 (64%), Gaps = 6/68 (8%)
Frame = -3
Query: 188 SNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVAFCIDS---- 21
SN +L LR KNPKL L + CS+ DLKIIH +LRTHL DVF ASR++A C+D
Sbjct: 2 SNIVLNTLRFKNPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFN 61
Query: 20 --PNSLGY 3
N LGY
Sbjct: 62 KPTNLLGY 69
>JAT45101.1 Pentatricopeptide repeat-containing protein At5g06540 [Anthurium
amnicola]
Length = 626
Score = 74.7 bits (182), Expect = 3e-13
Identities = 36/65 (55%), Positives = 46/65 (70%)
Frame = -3
Query: 206 MSSSVASNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVAFCI 27
M S +S + + L LK+PKL+L E CS L LK IHAHM+RTH+ DVF ASR++AFC+
Sbjct: 1 MRSGRSSPLVERTLCLKSPKLLLLETCSGLSQLKAIHAHMVRTHIIADVFCASRLLAFCV 60
Query: 26 DSPNS 12
D P S
Sbjct: 61 DPPPS 65
>ABE66133.1 pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 230
Score = 72.8 bits (177), Expect = 3e-13
Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 6/68 (8%)
Frame = -3
Query: 188 SNSILQKLRLKNPKLVLFEQCSNLRDLKIIHAHMLRTHLFFDVFAASRIVAFCIDS---- 21
SN +L LR K+PKL L + CS+ DLKIIH +LRTHL DVF ASR++A C+D
Sbjct: 2 SNIVLNTLRFKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFN 61
Query: 20 --PNSLGY 3
N LGY
Sbjct: 62 KPTNLLGY 69