BLASTX nr result
ID: Glycyrrhiza34_contig00008816
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza34_contig00008816
(499 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_004492605.1 PREDICTED: mediator of RNA polymerase II transcri... 89 2e-17
XP_013449281.1 mediator of RNA polymerase II transcription subun... 88 4e-17
GAU45990.1 hypothetical protein TSUD_187330 [Trifolium subterran... 88 4e-17
XP_003623670.1 mediator of RNA polymerase II transcription subun... 88 4e-17
XP_015961431.1 PREDICTED: mediator of RNA polymerase II transcri... 88 4e-17
XP_016198832.1 PREDICTED: mediator of RNA polymerase II transcri... 88 4e-17
KHN40588.1 hypothetical protein glysoja_001086 [Glycine soja] 85 4e-16
XP_006602736.1 PREDICTED: mediator of RNA polymerase II transcri... 85 4e-16
KYP42378.1 hypothetical protein KK1_036207 [Cajanus cajan] 77 2e-13
KOM37309.1 hypothetical protein LR48_Vigan03g069000 [Vigna angul... 73 3e-12
XP_017418360.1 PREDICTED: mediator of RNA polymerase II transcri... 73 5e-12
BAT83861.1 hypothetical protein VIGAN_04109700 [Vigna angularis ... 73 5e-12
XP_014497734.1 PREDICTED: mediator of RNA polymerase II transcri... 72 9e-12
XP_002323105.2 hypothetical protein POPTR_0016s14910g [Populus t... 59 4e-07
XP_011006238.1 PREDICTED: mediator of RNA polymerase II transcri... 59 4e-07
OMO77508.1 hypothetical protein COLO4_25124 [Corchorus olitorius] 57 1e-06
OMO51532.1 hypothetical protein CCACVL1_29737 [Corchorus capsula... 57 1e-06
XP_018818303.1 PREDICTED: mediator of RNA polymerase II transcri... 57 2e-06
XP_018818235.1 PREDICTED: mediator of RNA polymerase II transcri... 57 2e-06
XP_018818169.1 PREDICTED: mediator of RNA polymerase II transcri... 57 2e-06
>XP_004492605.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Cicer arietinum]
Length = 1318
Score = 88.6 bits (218), Expect = 2e-17
Identities = 43/46 (93%), Positives = 45/46 (97%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVIEFEHRMP 362
LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVIEF+H+ P
Sbjct: 1271 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVIEFKHKKP 1316
>XP_013449281.1 mediator of RNA polymerase II transcription subunit 33A [Medicago
truncatula] KEH23308.1 mediator of RNA polymerase II
transcription subunit 33A [Medicago truncatula]
Length = 992
Score = 87.8 bits (216), Expect = 4e-17
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVIEFEHRMP 362
LRKLA GLSRWNEHELALSLLQRGGTAAMGALAEL+NVIEFEH+ P
Sbjct: 945 LRKLAHGLSRWNEHELALSLLQRGGTAAMGALAELINVIEFEHKKP 990
>GAU45990.1 hypothetical protein TSUD_187330 [Trifolium subterraneum]
Length = 1247
Score = 87.8 bits (216), Expect = 4e-17
Identities = 43/46 (93%), Positives = 45/46 (97%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVIEFEHRMP 362
LRKLARGLSRWNE+ELALSLLQRGGTAAMGALAELVNVIEFEH+ P
Sbjct: 1200 LRKLARGLSRWNEYELALSLLQRGGTAAMGALAELVNVIEFEHKKP 1245
>XP_003623670.1 mediator of RNA polymerase II transcription subunit 33A [Medicago
truncatula] AES79888.1 mediator of RNA polymerase II
transcription subunit 33A [Medicago truncatula]
Length = 1320
Score = 87.8 bits (216), Expect = 4e-17
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVIEFEHRMP 362
LRKLA GLSRWNEHELALSLLQRGGTAAMGALAEL+NVIEFEH+ P
Sbjct: 1273 LRKLAHGLSRWNEHELALSLLQRGGTAAMGALAELINVIEFEHKKP 1318
>XP_015961431.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Arachis duranensis]
Length = 1324
Score = 87.8 bits (216), Expect = 4e-17
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVIEFEHRMPMPCS 350
LRKLA GL RW++HELALSLLQRGG AAMGALAELVN++EFE R+PMPCS
Sbjct: 1275 LRKLAHGLCRWHKHELALSLLQRGGVAAMGALAELVNLVEFEQRIPMPCS 1324
>XP_016198832.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Arachis ipaensis]
Length = 1326
Score = 87.8 bits (216), Expect = 4e-17
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVIEFEHRMPMPCS 350
LRKLA GL RW++HELALSLLQRGG AAMGALAELVN++EFE R+PMPCS
Sbjct: 1277 LRKLAHGLCRWHKHELALSLLQRGGVAAMGALAELVNLVEFEQRIPMPCS 1326
>KHN40588.1 hypothetical protein glysoja_001086 [Glycine soja]
Length = 1332
Score = 85.1 bits (209), Expect = 4e-16
Identities = 42/46 (91%), Positives = 43/46 (93%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVIEFEHRMP 362
LRKLARGLSRWNEHELALSLL RGGTAAMGALAELVNVIE EH +P
Sbjct: 1285 LRKLARGLSRWNEHELALSLLHRGGTAAMGALAELVNVIESEHMLP 1330
>XP_006602736.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Glycine max] KRH00532.1 hypothetical protein
GLYMA_18G218900 [Glycine max]
Length = 1332
Score = 85.1 bits (209), Expect = 4e-16
Identities = 42/46 (91%), Positives = 43/46 (93%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVIEFEHRMP 362
LRKLARGLSRWNEHELALSLL RGGTAAMGALAELVNVIE EH +P
Sbjct: 1285 LRKLARGLSRWNEHELALSLLHRGGTAAMGALAELVNVIESEHMLP 1330
>KYP42378.1 hypothetical protein KK1_036207 [Cajanus cajan]
Length = 1233
Score = 77.0 bits (188), Expect = 2e-13
Identities = 39/46 (84%), Positives = 40/46 (86%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVIEFEHRMP 362
LRKLARGLSRWNE ELALSLL RGGTAAMGALAE VNVI+ EH P
Sbjct: 1186 LRKLARGLSRWNEVELALSLLHRGGTAAMGALAEFVNVIDSEHMSP 1231
>KOM37309.1 hypothetical protein LR48_Vigan03g069000 [Vigna angularis]
Length = 372
Score = 73.2 bits (178), Expect = 3e-12
Identities = 37/50 (74%), Positives = 40/50 (80%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVIEFEHRMPMPCS 350
L+KLA GLSRWNEHE+ALSLL RGG AAMGALAELV VIE E +P S
Sbjct: 320 LKKLALGLSRWNEHEIALSLLHRGGLAAMGALAELVTVIESERMLPSSLS 369
>XP_017418360.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Vigna angularis]
Length = 1331
Score = 73.2 bits (178), Expect = 5e-12
Identities = 37/50 (74%), Positives = 40/50 (80%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVIEFEHRMPMPCS 350
L+KLA GLSRWNEHE+ALSLL RGG AAMGALAELV VIE E +P S
Sbjct: 1279 LKKLALGLSRWNEHEIALSLLHRGGLAAMGALAELVTVIESERMLPSSLS 1328
>BAT83861.1 hypothetical protein VIGAN_04109700 [Vigna angularis var. angularis]
Length = 1331
Score = 73.2 bits (178), Expect = 5e-12
Identities = 37/50 (74%), Positives = 40/50 (80%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVIEFEHRMPMPCS 350
L+KLA GLSRWNEHE+ALSLL RGG AAMGALAELV VIE E +P S
Sbjct: 1279 LKKLALGLSRWNEHEIALSLLHRGGLAAMGALAELVTVIESERMLPSSLS 1328
>XP_014497734.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Vigna radiata var. radiata]
Length = 1326
Score = 72.4 bits (176), Expect = 9e-12
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVIEFEHRMP 362
L+KLA GLSRWNEHE+ALSLL RGG AAMGALAELV V+E E +P
Sbjct: 1279 LKKLALGLSRWNEHEIALSLLHRGGLAAMGALAELVTVVESERMLP 1324
>XP_002323105.2 hypothetical protein POPTR_0016s14910g [Populus trichocarpa]
EEF04866.2 hypothetical protein POPTR_0016s14910g
[Populus trichocarpa]
Length = 1346
Score = 58.9 bits (141), Expect = 4e-07
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 383
LRKLA GL W+E ELALSLL+RGG AAMG++AEL+NVI
Sbjct: 1307 LRKLASGLRGWHESELALSLLERGGVAAMGSVAELLNVI 1345
>XP_011006238.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Populus euphratica]
Length = 1348
Score = 58.9 bits (141), Expect = 4e-07
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 383
LRKLA GL W+E ELALSLL+RGG AAMG++AEL+NVI
Sbjct: 1309 LRKLASGLRGWHESELALSLLERGGVAAMGSVAELLNVI 1347
>OMO77508.1 hypothetical protein COLO4_25124 [Corchorus olitorius]
Length = 1281
Score = 57.4 bits (137), Expect = 1e-06
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 383
LRKLA GL W+E+ELALSLL+RGG A G++AELVNVI
Sbjct: 1242 LRKLASGLRGWDEYELALSLLERGGVPAFGSVAELVNVI 1280
>OMO51532.1 hypothetical protein CCACVL1_29737 [Corchorus capsularis]
Length = 1303
Score = 57.4 bits (137), Expect = 1e-06
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 383
LRKLA GL W+E+ELALSLL+RGG A G++AELVNVI
Sbjct: 1264 LRKLASGLRGWDEYELALSLLERGGVPAFGSVAELVNVI 1302
>XP_018818303.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X5 [Juglans regia]
Length = 1085
Score = 57.0 bits (136), Expect = 2e-06
Identities = 28/39 (71%), Positives = 35/39 (89%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 383
LRKLA GL W+E ELA+SLL+RGGTAA+G++AEL+NVI
Sbjct: 1046 LRKLACGLRGWHECELAISLLERGGTAAIGSVAELLNVI 1084
>XP_018818235.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X4 [Juglans regia]
Length = 1089
Score = 57.0 bits (136), Expect = 2e-06
Identities = 28/39 (71%), Positives = 35/39 (89%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 383
LRKLA GL W+E ELA+SLL+RGGTAA+G++AEL+NVI
Sbjct: 1050 LRKLACGLRGWHECELAISLLERGGTAAIGSVAELLNVI 1088
>XP_018818169.1 PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X3 [Juglans regia]
Length = 1274
Score = 57.0 bits (136), Expect = 2e-06
Identities = 28/39 (71%), Positives = 35/39 (89%)
Frame = -1
Query: 499 LRKLARGLSRWNEHELALSLLQRGGTAAMGALAELVNVI 383
LRKLA GL W+E ELA+SLL+RGGTAA+G++AEL+NVI
Sbjct: 1235 LRKLACGLRGWHECELAISLLERGGTAAIGSVAELLNVI 1273