BLASTX nr result
ID: Glycyrrhiza34_contig00007599
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza34_contig00007599
(2909 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_009027273.1 RNA polymerase beta (chloroplast) [Glycyrrhiza gl... 852 0.0
AMC32330.1 RNA polymerase beta' subunit (chloroplast) [Glycyrrhi... 848 0.0
XP_003600568.1 DNA-directed RNA polymerase subunit beta [Medicag... 838 0.0
YP_009141611.1 RNA polymerase beta (chloroplast) [Medicago hybri... 839 0.0
YP_009161289.1 RpoC1 (chloroplast) [Wisteria floribunda] YP_0092... 836 0.0
AJE72235.1 RNA polymerase beta ' subunit (plastid) [Oxytropis la... 831 0.0
AMC32333.1 RNA polymerase beta' subunit (chloroplast) [Medicago ... 833 0.0
YP_009175760.1 RNA polymerase beta' subunit (chloroplast) [Astra... 828 0.0
YP_009334190.1 RpoC1 (chloroplast) [Caragana microphylla] APL973... 833 0.0
YP_002149734.1 RNA polymerase beta [Cicer arietinum] ACH41071.1 ... 832 0.0
YP_009327947.1 RNA polymerase beta' subunit (chloroplast) [Medic... 832 0.0
AJE71738.1 RNA polymerase beta ' subunit (plastid) [Astragalus c... 828 0.0
AGV52604.1 RNA polymerase beta' subunit (chloroplast) [Medicago ... 828 0.0
AJE72732.1 RNA polymerase beta ' subunit (plastid) [Astragalus c... 823 0.0
AJE72519.1 RNA polymerase beta ' subunit (plastid) [Medicago lup... 825 0.0
AFR59974.1 RNA polymerase beta' subunit (plastid) [Medicago trun... 827 0.0
AFR60050.1 RNA polymerase beta' subunit (plastid) [Medicago trun... 824 0.0
AJE71596.1 RNA polymerase beta ' subunit (plastid) [Melilotus of... 824 0.0
AIJ28041.1 RNA polymerase beta (chloroplast) [Trifolium lupinaster] 824 0.0
YP_009109856.1 RNA polymerase beta (chloroplast) [Trifolium glan... 816 0.0
>YP_009027273.1 RNA polymerase beta (chloroplast) [Glycyrrhiza glabra] AGU00069.1 RNA
polymerase beta (chloroplast) [Glycyrrhiza glabra]
Length = 684
Score = 852 bits (2200), Expect(2) = 0.0
Identities = 426/442 (96%), Positives = 427/442 (96%)
Frame = +3
Query: 369 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 548
Y +FSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE
Sbjct: 142 YCDFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 201
Query: 549 QLVDLDLRIIMDSSLVEWKELGEEGSIDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 728
QLVDLDLRIIMDSSLVEWKELGEEGS DNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI
Sbjct: 202 QLVDLDLRIIMDSSLVEWKELGEEGSTDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 261
Query: 729 EPEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 908
EPEWMV IIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE
Sbjct: 262 EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 321
Query: 909 LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 1088
LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS
Sbjct: 322 LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 381
Query: 1089 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 1268
GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE
Sbjct: 382 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 441
Query: 1269 ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV 1448
ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV
Sbjct: 442 ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV 501
Query: 1449 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN 1628
PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN
Sbjct: 502 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN 561
Query: 1629 CRNSQNEKNRDNNYQYMKKKEP 1694
CRNSQNEKNRDNNYQYMKKKEP
Sbjct: 562 CRNSQNEKNRDNNYQYMKKKEP 583
Score = 216 bits (551), Expect(2) = 0.0
Identities = 101/101 (100%), Positives = 101/101 (100%)
Frame = +1
Query: 1696 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 1875
FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV
Sbjct: 584 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 643
Query: 1876 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI
Sbjct: 644 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 684
>AMC32330.1 RNA polymerase beta' subunit (chloroplast) [Glycyrrhiza lepidota]
Length = 684
Score = 848 bits (2192), Expect(2) = 0.0
Identities = 425/442 (96%), Positives = 426/442 (96%)
Frame = +3
Query: 369 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 548
Y +FSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE
Sbjct: 142 YCDFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 201
Query: 549 QLVDLDLRIIMDSSLVEWKELGEEGSIDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 728
QLVDLDLRIIMDSSLVEWKELGEEGS DNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI
Sbjct: 202 QLVDLDLRIIMDSSLVEWKELGEEGSTDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 261
Query: 729 EPEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 908
EPEWMV IIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE
Sbjct: 262 EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 321
Query: 909 LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 1088
LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS
Sbjct: 322 LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 381
Query: 1089 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 1268
GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRK FASNIGVAKSKIREKEPIVWE
Sbjct: 382 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKQFASNIGVAKSKIREKEPIVWE 441
Query: 1269 ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV 1448
ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV
Sbjct: 442 ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV 501
Query: 1449 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN 1628
PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN
Sbjct: 502 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN 561
Query: 1629 CRNSQNEKNRDNNYQYMKKKEP 1694
CRNSQNEKNRDNNYQYMKKKEP
Sbjct: 562 CRNSQNEKNRDNNYQYMKKKEP 583
Score = 216 bits (551), Expect(2) = 0.0
Identities = 101/101 (100%), Positives = 101/101 (100%)
Frame = +1
Query: 1696 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 1875
FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV
Sbjct: 584 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 643
Query: 1876 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI
Sbjct: 644 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 684
>XP_003600568.1 DNA-directed RNA polymerase subunit beta [Medicago truncatula]
XP_003600569.1 DNA-directed RNA polymerase subunit beta
[Medicago truncatula] AES70819.1 DNA-directed RNA
polymerase subunit beta [Medicago truncatula] KEH34529.1
DNA-directed RNA polymerase subunit beta [Medicago
truncatula]
Length = 710
Score = 838 bits (2165), Expect(3) = 0.0
Identities = 420/447 (93%), Positives = 427/447 (95%), Gaps = 2/447 (0%)
Frame = +3
Query: 360 IGSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGA 539
IGSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGA
Sbjct: 163 IGSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGA 222
Query: 540 IREQLVDLDLRIIMDSSLVEWKELGEEGSIDNENE--WEDRKVGRRKNFLVRRMELAKHF 713
IREQLVDLDLRIIMDSSLVEWKELGEEGS DNENE WEDRKVGRRKNFLVRRMEL KHF
Sbjct: 223 IREQLVDLDLRIIMDSSLVEWKELGEEGSADNENENEWEDRKVGRRKNFLVRRMELVKHF 282
Query: 714 IRTNIEPEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSR 893
IRTNIEPEWMV IIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSR
Sbjct: 283 IRTNIEPEWMVLSLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSR 342
Query: 894 STPGELIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGK 1073
STPGEL+MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGK
Sbjct: 343 STPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGK 402
Query: 1074 RVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKE 1253
RVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKE
Sbjct: 403 RVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKE 462
Query: 1254 PIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQ 1433
PIVWEILQEVM+GHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQ
Sbjct: 463 PIVWEILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQ 522
Query: 1434 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 1613
MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR
Sbjct: 523 MAVHVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANR 582
Query: 1614 YNPYNCRNSQNEKNRDNNYQYMKKKEP 1694
YNP+NCRNS+NEK +NN +YMKKKEP
Sbjct: 583 YNPFNCRNSKNEKISNNNSKYMKKKEP 609
Score = 208 bits (529), Expect(3) = 0.0
Identities = 97/101 (96%), Positives = 98/101 (97%)
Frame = +1
Query: 1696 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 1875
FFCNSYDAIGAYRQKRIN DSPFWLRWR+DQCIMSSREVPIEVHYES GTYYEIYGHYLV
Sbjct: 610 FFCNSYDAIGAYRQKRINLDSPFWLRWRIDQCIMSSREVPIEVHYESFGTYYEIYGHYLV 669
Query: 1876 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGF RAYSYGI
Sbjct: 670 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFSRAYSYGI 710
Score = 34.3 bits (77), Expect(3) = 0.0
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 313 RMRGNPHVRFGKGEI 357
RMRGNPHVRF KGEI
Sbjct: 146 RMRGNPHVRFSKGEI 160
>YP_009141611.1 RNA polymerase beta (chloroplast) [Medicago hybrida] YP_009141686.1
RNA polymerase beta (chloroplast) [Medicago papillosa]
AIL56136.1 RNA polymerase beta (chloroplast) [Medicago
hybrida] AIL56211.1 RNA polymerase beta (chloroplast)
[Medicago papillosa] ANS57906.1 RNA polymerase beta'
subunit (chloroplast) [Medicago sativa]
Length = 688
Score = 839 bits (2168), Expect(2) = 0.0
Identities = 418/442 (94%), Positives = 425/442 (96%)
Frame = +3
Query: 369 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 548
YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE
Sbjct: 146 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 205
Query: 549 QLVDLDLRIIMDSSLVEWKELGEEGSIDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 728
QLVDLDLRIIMDSSLVEWKELGEEGS DNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI
Sbjct: 206 QLVDLDLRIIMDSSLVEWKELGEEGSTDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 265
Query: 729 EPEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 908
EPEWMV IIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE
Sbjct: 266 EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 325
Query: 909 LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 1088
L+MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS
Sbjct: 326 LVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 385
Query: 1089 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 1268
GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE
Sbjct: 386 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 445
Query: 1269 ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV 1448
ILQEVM+GHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHV
Sbjct: 446 ILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHV 505
Query: 1449 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN 1628
PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNP+N
Sbjct: 506 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPFN 565
Query: 1629 CRNSQNEKNRDNNYQYMKKKEP 1694
CRNS+NEK +NN +YMKKKEP
Sbjct: 566 CRNSKNEKISNNNSKYMKKKEP 587
Score = 210 bits (535), Expect(2) = 0.0
Identities = 98/101 (97%), Positives = 99/101 (98%)
Frame = +1
Query: 1696 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 1875
FFCNSYDAIGAYRQKRINFDSPFWLRWR+DQCIMSSREVPIEVHYES GTYYEIYGHYLV
Sbjct: 588 FFCNSYDAIGAYRQKRINFDSPFWLRWRIDQCIMSSREVPIEVHYESFGTYYEIYGHYLV 647
Query: 1876 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGF RAYSYGI
Sbjct: 648 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFSRAYSYGI 688
>YP_009161289.1 RpoC1 (chloroplast) [Wisteria floribunda] YP_009233394.1 RpoC1
(chloroplast) [Wisteria sinensis] AJC10038.1 RpoC1
(chloroplast) [Wisteria floribunda] AMB27274.1 RpoC1
(chloroplast) [Wisteria sinensis]
Length = 684
Score = 836 bits (2160), Expect(2) = 0.0
Identities = 418/442 (94%), Positives = 424/442 (95%)
Frame = +3
Query: 369 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 548
Y +FSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE
Sbjct: 142 YCDFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 201
Query: 549 QLVDLDLRIIMDSSLVEWKELGEEGSIDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 728
QLVDLDLRIIMDSSLVEWKELGEEGS DNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI
Sbjct: 202 QLVDLDLRIIMDSSLVEWKELGEEGSTDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 261
Query: 729 EPEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 908
EPEWMV IIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE
Sbjct: 262 EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 321
Query: 909 LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 1088
L+MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS
Sbjct: 322 LVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 381
Query: 1089 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 1268
GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE
Sbjct: 382 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 441
Query: 1269 ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV 1448
ILQEVM+GHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHV
Sbjct: 442 ILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHV 501
Query: 1449 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN 1628
PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTS NRRGICANRYNP N
Sbjct: 502 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSRNRRGICANRYNPCN 561
Query: 1629 CRNSQNEKNRDNNYQYMKKKEP 1694
CRNS+NEK RDNNY+YMKKKEP
Sbjct: 562 CRNSKNEKIRDNNYKYMKKKEP 583
Score = 213 bits (541), Expect(2) = 0.0
Identities = 100/101 (99%), Positives = 100/101 (99%)
Frame = +1
Query: 1696 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 1875
FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV
Sbjct: 584 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 643
Query: 1876 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGF RAYSYGI
Sbjct: 644 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFSRAYSYGI 684
>AJE72235.1 RNA polymerase beta ' subunit (plastid) [Oxytropis lambertii]
Length = 684
Score = 831 bits (2147), Expect(2) = 0.0
Identities = 416/442 (94%), Positives = 423/442 (95%)
Frame = +3
Query: 369 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 548
Y +FSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE
Sbjct: 142 YCDFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 201
Query: 549 QLVDLDLRIIMDSSLVEWKELGEEGSIDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 728
QLVDLDLRIIMDSSLVEWKELGEEGS DNENEWEDRKVGRRKNFLVRR+ELAKHFIRTNI
Sbjct: 202 QLVDLDLRIIMDSSLVEWKELGEEGSTDNENEWEDRKVGRRKNFLVRRIELAKHFIRTNI 261
Query: 729 EPEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 908
EPEWMV IIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE
Sbjct: 262 EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 321
Query: 909 LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 1088
L+MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS
Sbjct: 322 LVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 381
Query: 1089 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 1268
GRSVIVVGPSLSLH+CGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE
Sbjct: 382 GRSVIVVGPSLSLHQCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 441
Query: 1269 ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV 1448
ILQEVM+GHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHV
Sbjct: 442 ILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHV 501
Query: 1449 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN 1628
PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNP N
Sbjct: 502 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPCN 561
Query: 1629 CRNSQNEKNRDNNYQYMKKKEP 1694
NSQNEK RDNNY+YMKKKEP
Sbjct: 562 YTNSQNEKIRDNNYKYMKKKEP 583
Score = 216 bits (549), Expect(2) = 0.0
Identities = 100/101 (99%), Positives = 101/101 (100%)
Frame = +1
Query: 1696 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 1875
FFCNSYDAIGAYRQKRINFDSPFWLRWR+DQCIMSSREVPIEVHYESLGTYYEIYGHYLV
Sbjct: 584 FFCNSYDAIGAYRQKRINFDSPFWLRWRIDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 643
Query: 1876 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI
Sbjct: 644 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 684
>AMC32333.1 RNA polymerase beta' subunit (chloroplast) [Medicago sativa]
Length = 684
Score = 833 bits (2153), Expect(2) = 0.0
Identities = 416/442 (94%), Positives = 424/442 (95%)
Frame = +3
Query: 369 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 548
Y +FSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE
Sbjct: 142 YCDFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 201
Query: 549 QLVDLDLRIIMDSSLVEWKELGEEGSIDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 728
QLVDLDLRIIMDSSLVEWKELGEEGS DNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI
Sbjct: 202 QLVDLDLRIIMDSSLVEWKELGEEGSTDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 261
Query: 729 EPEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 908
EPEWMV IIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE
Sbjct: 262 EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 321
Query: 909 LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 1088
L+MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS
Sbjct: 322 LVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 381
Query: 1089 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 1268
GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE
Sbjct: 382 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 441
Query: 1269 ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV 1448
ILQEVM+GHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHV
Sbjct: 442 ILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHV 501
Query: 1449 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN 1628
PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNP+N
Sbjct: 502 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPFN 561
Query: 1629 CRNSQNEKNRDNNYQYMKKKEP 1694
CRNS+NEK +NN +YMKKKEP
Sbjct: 562 CRNSKNEKISNNNSKYMKKKEP 583
Score = 210 bits (535), Expect(2) = 0.0
Identities = 98/101 (97%), Positives = 99/101 (98%)
Frame = +1
Query: 1696 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 1875
FFCNSYDAIGAYRQKRINFDSPFWLRWR+DQCIMSSREVPIEVHYES GTYYEIYGHYLV
Sbjct: 584 FFCNSYDAIGAYRQKRINFDSPFWLRWRIDQCIMSSREVPIEVHYESFGTYYEIYGHYLV 643
Query: 1876 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGF RAYSYGI
Sbjct: 644 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFSRAYSYGI 684
>YP_009175760.1 RNA polymerase beta' subunit (chloroplast) [Astragalus mongholicus
var. nakaianus] YP_009242954.1 RNA polymerase beta'
subunit (chloroplast) [Astragalus mongholicus] ALH42738.1
RNA polymerase beta' subunit (chloroplast) [Astragalus
mongholicus var. nakaianus] AMQ99217.1 RNA polymerase
beta' subunit (chloroplast) [Astragalus mongholicus]
ANK78935.1 RNA polymerase beta' subunit (chloroplast)
[Astragalus membranaceus var. membranaceus]
Length = 684
Score = 828 bits (2138), Expect(2) = 0.0
Identities = 414/442 (93%), Positives = 422/442 (95%)
Frame = +3
Query: 369 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 548
Y +FSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE
Sbjct: 142 YCDFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 201
Query: 549 QLVDLDLRIIMDSSLVEWKELGEEGSIDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 728
QLVDLDLR IMDSSLVEWKELGEEGS DNENEWEDRKVGRRKNFLVRR+ELAKHFIRTNI
Sbjct: 202 QLVDLDLRSIMDSSLVEWKELGEEGSTDNENEWEDRKVGRRKNFLVRRIELAKHFIRTNI 261
Query: 729 EPEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 908
EPEWMV IIQIDGGKLMSSDINELYRRVIYRNNTL+DLLTTSRSTPGE
Sbjct: 262 EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLMDLLTTSRSTPGE 321
Query: 909 LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 1088
L+MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS
Sbjct: 322 LVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 381
Query: 1089 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 1268
GRSVIVVGPSLSLH+CGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE
Sbjct: 382 GRSVIVVGPSLSLHQCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 441
Query: 1269 ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV 1448
ILQEVM+GHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHV
Sbjct: 442 ILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHV 501
Query: 1449 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN 1628
PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNP N
Sbjct: 502 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPCN 561
Query: 1629 CRNSQNEKNRDNNYQYMKKKEP 1694
NSQNEK RDNNY+YMKKKEP
Sbjct: 562 YTNSQNEKIRDNNYKYMKKKEP 583
Score = 216 bits (549), Expect(2) = 0.0
Identities = 100/101 (99%), Positives = 101/101 (100%)
Frame = +1
Query: 1696 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 1875
FFCNSYDAIGAYRQKRINFDSPFWLRWR+DQCIMSSREVPIEVHYESLGTYYEIYGHYLV
Sbjct: 584 FFCNSYDAIGAYRQKRINFDSPFWLRWRIDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 643
Query: 1876 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI
Sbjct: 644 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 684
>YP_009334190.1 RpoC1 (chloroplast) [Caragana microphylla] APL97396.1 RpoC1
(chloroplast) [Caragana microphylla]
Length = 684
Score = 833 bits (2152), Expect(2) = 0.0
Identities = 417/442 (94%), Positives = 423/442 (95%)
Frame = +3
Query: 369 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 548
Y +FSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE
Sbjct: 142 YCDFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 201
Query: 549 QLVDLDLRIIMDSSLVEWKELGEEGSIDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 728
QLVDLDLRIIMDSSLVEWKELGEEGS DN+NEWEDRKVGRRKNFLVRRMELAKHFIRTNI
Sbjct: 202 QLVDLDLRIIMDSSLVEWKELGEEGSTDNDNEWEDRKVGRRKNFLVRRMELAKHFIRTNI 261
Query: 729 EPEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 908
EPEWMV IIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE
Sbjct: 262 EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 321
Query: 909 LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 1088
L+MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS
Sbjct: 322 LVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 381
Query: 1089 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 1268
GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKH ASNIGVAKSKIREKEPIVWE
Sbjct: 382 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHVASNIGVAKSKIREKEPIVWE 441
Query: 1269 ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV 1448
ILQEVM+GHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHV
Sbjct: 442 ILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHV 501
Query: 1449 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN 1628
PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGI ANRYNP N
Sbjct: 502 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGISANRYNPCN 561
Query: 1629 CRNSQNEKNRDNNYQYMKKKEP 1694
CRNSQNEK RDNNY+YMKKKEP
Sbjct: 562 CRNSQNEKIRDNNYKYMKKKEP 583
Score = 210 bits (534), Expect(2) = 0.0
Identities = 98/101 (97%), Positives = 99/101 (98%)
Frame = +1
Query: 1696 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 1875
FFCNSYDAIGAYRQKRINFDSPFWLRWR+DQCIMSSREVPIEVHYESLGTYYEIYG YLV
Sbjct: 584 FFCNSYDAIGAYRQKRINFDSPFWLRWRIDQCIMSSREVPIEVHYESLGTYYEIYGDYLV 643
Query: 1876 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSY I
Sbjct: 644 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYSI 684
>YP_002149734.1 RNA polymerase beta [Cicer arietinum] ACH41071.1 RNA polymerase beta
(chloroplast) [Cicer arietinum]
Length = 684
Score = 832 bits (2148), Expect(2) = 0.0
Identities = 413/442 (93%), Positives = 423/442 (95%)
Frame = +3
Query: 369 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 548
Y +FSFARP++KKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE
Sbjct: 142 YCDFSFARPIIKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 201
Query: 549 QLVDLDLRIIMDSSLVEWKELGEEGSIDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 728
QLVDLDLRIIMDSSL+EWKELGEEGS DNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI
Sbjct: 202 QLVDLDLRIIMDSSLIEWKELGEEGSTDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 261
Query: 729 EPEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 908
EPEWMV IIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE
Sbjct: 262 EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 321
Query: 909 LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 1088
L+MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS
Sbjct: 322 LVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 381
Query: 1089 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 1268
GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRK+ ASNIGVAKSKIREKEPIVWE
Sbjct: 382 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKNCASNIGVAKSKIREKEPIVWE 441
Query: 1269 ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV 1448
ILQEVMQGHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHV
Sbjct: 442 ILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHV 501
Query: 1449 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN 1628
PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNP+N
Sbjct: 502 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPFN 561
Query: 1629 CRNSQNEKNRDNNYQYMKKKEP 1694
CRNSQNEK DNNY+Y+KK EP
Sbjct: 562 CRNSQNEKISDNNYKYIKKNEP 583
Score = 211 bits (536), Expect(2) = 0.0
Identities = 98/101 (97%), Positives = 100/101 (99%)
Frame = +1
Query: 1696 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 1875
FFCNSYDAIGAYRQKRINFDSPFWLRWR+DQCI+SSREVPIEVHYESLGTYYEIYGHYLV
Sbjct: 584 FFCNSYDAIGAYRQKRINFDSPFWLRWRIDQCILSSREVPIEVHYESLGTYYEIYGHYLV 643
Query: 1876 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGF RAYSYGI
Sbjct: 644 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFSRAYSYGI 684
>YP_009327947.1 RNA polymerase beta' subunit (chloroplast) [Medicago falcata]
AOG66218.1 RNA polymerase beta' subunit (chloroplast)
[Medicago sativa] APC60491.1 RNA polymerase beta' subunit
(chloroplast) [Medicago falcata]
Length = 685
Score = 832 bits (2148), Expect(2) = 0.0
Identities = 415/439 (94%), Positives = 422/439 (96%)
Frame = +3
Query: 378 FSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIREQLV 557
FSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIREQLV
Sbjct: 146 FSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIREQLV 205
Query: 558 DLDLRIIMDSSLVEWKELGEEGSIDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNIEPE 737
DLDLRIIMDSSLVEWKELGEEGS DNENEWEDRKVGRRKNFLVRRMELAKHFIRTNIEPE
Sbjct: 206 DLDLRIIMDSSLVEWKELGEEGSTDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNIEPE 265
Query: 738 WMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELIM 917
WMV IIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGEL+M
Sbjct: 266 WMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVM 325
Query: 918 CQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRS 1097
CQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRS
Sbjct: 326 CQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRS 385
Query: 1098 VIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWEILQ 1277
VIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWEILQ
Sbjct: 386 VIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWEILQ 445
Query: 1278 EVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHVPLS 1457
EVM+GHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHVPLS
Sbjct: 446 EVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLS 505
Query: 1458 LEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYNCRN 1637
LEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNP+NCRN
Sbjct: 506 LEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPFNCRN 565
Query: 1638 SQNEKNRDNNYQYMKKKEP 1694
S+NEK +NN +YMKKKEP
Sbjct: 566 SKNEKISNNNSKYMKKKEP 584
Score = 210 bits (535), Expect(2) = 0.0
Identities = 98/101 (97%), Positives = 99/101 (98%)
Frame = +1
Query: 1696 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 1875
FFCNSYDAIGAYRQKRINFDSPFWLRWR+DQCIMSSREVPIEVHYES GTYYEIYGHYLV
Sbjct: 585 FFCNSYDAIGAYRQKRINFDSPFWLRWRIDQCIMSSREVPIEVHYESFGTYYEIYGHYLV 644
Query: 1876 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGF RAYSYGI
Sbjct: 645 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFSRAYSYGI 685
>AJE71738.1 RNA polymerase beta ' subunit (plastid) [Astragalus canadensis]
Length = 684
Score = 828 bits (2140), Expect(2) = 0.0
Identities = 414/442 (93%), Positives = 422/442 (95%)
Frame = +3
Query: 369 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 548
Y +FSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE
Sbjct: 142 YCDFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 201
Query: 549 QLVDLDLRIIMDSSLVEWKELGEEGSIDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 728
QL+DLDLR IMDSSLVEWKELGEEGS DNENEWEDRKVGRRKNFLVRR+ELAKHFIRTNI
Sbjct: 202 QLIDLDLRSIMDSSLVEWKELGEEGSTDNENEWEDRKVGRRKNFLVRRIELAKHFIRTNI 261
Query: 729 EPEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 908
EPEWMV IIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE
Sbjct: 262 EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 321
Query: 909 LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 1088
L+MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS
Sbjct: 322 LVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 381
Query: 1089 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 1268
GRSVIVVGPSLSLH+CGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE
Sbjct: 382 GRSVIVVGPSLSLHQCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 441
Query: 1269 ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV 1448
ILQEVM+GHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHV
Sbjct: 442 ILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHV 501
Query: 1449 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN 1628
PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNP N
Sbjct: 502 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPCN 561
Query: 1629 CRNSQNEKNRDNNYQYMKKKEP 1694
NSQNEK RDNNY+YMKKKEP
Sbjct: 562 YTNSQNEKIRDNNYKYMKKKEP 583
Score = 213 bits (542), Expect(2) = 0.0
Identities = 99/101 (98%), Positives = 100/101 (99%)
Frame = +1
Query: 1696 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 1875
FFCNSYDAIGAYRQKRINFDSPFWLRWR+DQCIMSSREVPIEVHYESLGTYYEIYGHYLV
Sbjct: 584 FFCNSYDAIGAYRQKRINFDSPFWLRWRIDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 643
Query: 1876 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSY I
Sbjct: 644 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYDI 684
>AGV52604.1 RNA polymerase beta' subunit (chloroplast) [Medicago truncatula f.
tricycla]
Length = 684
Score = 828 bits (2140), Expect(2) = 0.0
Identities = 414/442 (93%), Positives = 422/442 (95%)
Frame = +3
Query: 369 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 548
Y +FSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE
Sbjct: 142 YCDFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 201
Query: 549 QLVDLDLRIIMDSSLVEWKELGEEGSIDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 728
QLVDLDLRIIMDSSLVEWKELGEEGS DNENEWEDRKVGRRKNFLVRRMEL KHFIRTNI
Sbjct: 202 QLVDLDLRIIMDSSLVEWKELGEEGSADNENEWEDRKVGRRKNFLVRRMELVKHFIRTNI 261
Query: 729 EPEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 908
EPEWMV IIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE
Sbjct: 262 EPEWMVLSLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 321
Query: 909 LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 1088
L+MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS
Sbjct: 322 LVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 381
Query: 1089 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 1268
GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE
Sbjct: 382 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 441
Query: 1269 ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV 1448
ILQEVM+GHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHV
Sbjct: 442 ILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHV 501
Query: 1449 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN 1628
PLSLEAQAEARLLMFS TNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNP+N
Sbjct: 502 PLSLEAQAEARLLMFSDTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPFN 561
Query: 1629 CRNSQNEKNRDNNYQYMKKKEP 1694
CRNS+NEK +NN +YMKKKEP
Sbjct: 562 CRNSKNEKISNNNSKYMKKKEP 583
Score = 210 bits (535), Expect(2) = 0.0
Identities = 98/101 (97%), Positives = 99/101 (98%)
Frame = +1
Query: 1696 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 1875
FFCNSYDAIGAYRQKRINFDSPFWLRWR+DQCIMSSREVPIEVHYES GTYYEIYGHYLV
Sbjct: 584 FFCNSYDAIGAYRQKRINFDSPFWLRWRIDQCIMSSREVPIEVHYESFGTYYEIYGHYLV 643
Query: 1876 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGF RAYSYGI
Sbjct: 644 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFSRAYSYGI 684
>AJE72732.1 RNA polymerase beta ' subunit (plastid) [Astragalus crassicarpus]
Length = 684
Score = 823 bits (2125), Expect(2) = 0.0
Identities = 413/442 (93%), Positives = 420/442 (95%)
Frame = +3
Query: 369 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 548
Y +FSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE
Sbjct: 142 YCDFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 201
Query: 549 QLVDLDLRIIMDSSLVEWKELGEEGSIDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 728
QLVDLDLR IMDSSLVEWKELGEEGS DNENEWEDRKVGRRKNFLVRR+ELAKHFIRTNI
Sbjct: 202 QLVDLDLRSIMDSSLVEWKELGEEGSTDNENEWEDRKVGRRKNFLVRRIELAKHFIRTNI 261
Query: 729 EPEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 908
EPEWMV IIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE
Sbjct: 262 EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 321
Query: 909 LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 1088
L+MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS
Sbjct: 322 LVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 381
Query: 1089 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 1268
GRSVIVVGPSLSLH+CGLPREIAIELFQTFLIR LIRKHFASNIGVAKSKIREKEPIVWE
Sbjct: 382 GRSVIVVGPSLSLHQCGLPREIAIELFQTFLIRDLIRKHFASNIGVAKSKIREKEPIVWE 441
Query: 1269 ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV 1448
ILQEVM+GHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHV
Sbjct: 442 ILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHV 501
Query: 1449 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN 1628
PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNP N
Sbjct: 502 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPCN 561
Query: 1629 CRNSQNEKNRDNNYQYMKKKEP 1694
NSQNEK RDNN +YMKKKEP
Sbjct: 562 YTNSQNEKIRDNNSKYMKKKEP 583
Score = 214 bits (545), Expect(2) = 0.0
Identities = 99/101 (98%), Positives = 101/101 (100%)
Frame = +1
Query: 1696 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 1875
FFCNSYDAIGAYRQKRINFDSPFWLRWR+DQCIMSSREVPIEVHYESLGTYYEIYGH+LV
Sbjct: 584 FFCNSYDAIGAYRQKRINFDSPFWLRWRIDQCIMSSREVPIEVHYESLGTYYEIYGHFLV 643
Query: 1876 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI
Sbjct: 644 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 684
>AJE72519.1 RNA polymerase beta ' subunit (plastid) [Medicago lupulina]
Length = 684
Score = 825 bits (2132), Expect(2) = 0.0
Identities = 412/442 (93%), Positives = 421/442 (95%)
Frame = +3
Query: 369 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 548
Y +FSFAR VVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE
Sbjct: 142 YCDFSFARSVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 201
Query: 549 QLVDLDLRIIMDSSLVEWKELGEEGSIDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 728
QLVDLDLRIIMDSSLVEWKELGEEGS DNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI
Sbjct: 202 QLVDLDLRIIMDSSLVEWKELGEEGSTDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 261
Query: 729 EPEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 908
EPEWMV IIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE
Sbjct: 262 EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 321
Query: 909 LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 1088
L+MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS
Sbjct: 322 LVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 381
Query: 1089 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 1268
GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLI KHFASNIGVAKSKIREKEPIVWE
Sbjct: 382 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIGKHFASNIGVAKSKIREKEPIVWE 441
Query: 1269 ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV 1448
ILQEVM+GHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHV
Sbjct: 442 ILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHV 501
Query: 1449 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN 1628
PLSLEAQAEARLLMFSHTNLLSPAIGDPI VPTQDMLIGLY+LTSGNRRGICANRYNP+N
Sbjct: 502 PLSLEAQAEARLLMFSHTNLLSPAIGDPICVPTQDMLIGLYILTSGNRRGICANRYNPFN 561
Query: 1629 CRNSQNEKNRDNNYQYMKKKEP 1694
CRNS+NEK +NN +YMKKKEP
Sbjct: 562 CRNSKNEKISNNNSKYMKKKEP 583
Score = 210 bits (535), Expect(2) = 0.0
Identities = 98/101 (97%), Positives = 99/101 (98%)
Frame = +1
Query: 1696 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 1875
FFCNSYDAIGAYRQKRINFDSPFWLRWR+DQCIMSSREVPIEVHYES GTYYEIYGHYLV
Sbjct: 584 FFCNSYDAIGAYRQKRINFDSPFWLRWRIDQCIMSSREVPIEVHYESFGTYYEIYGHYLV 643
Query: 1876 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGF RAYSYGI
Sbjct: 644 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFSRAYSYGI 684
>AFR59974.1 RNA polymerase beta' subunit (plastid) [Medicago truncatula]
Length = 686
Score = 827 bits (2136), Expect(2) = 0.0
Identities = 415/444 (93%), Positives = 423/444 (95%), Gaps = 2/444 (0%)
Frame = +3
Query: 369 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 548
Y +FSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE
Sbjct: 142 YCDFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 201
Query: 549 QLVDLDLRIIMDSSLVEWKELGEEGSIDNENE--WEDRKVGRRKNFLVRRMELAKHFIRT 722
QLVDLDLRIIMDSSLVEWKELGEEGS DNENE WEDRKVGRRKNFLVRRMEL KHFIRT
Sbjct: 202 QLVDLDLRIIMDSSLVEWKELGEEGSADNENENEWEDRKVGRRKNFLVRRMELVKHFIRT 261
Query: 723 NIEPEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTP 902
NIEPEWMV IIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTP
Sbjct: 262 NIEPEWMVLSLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTP 321
Query: 903 GELIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVD 1082
GEL+MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVD
Sbjct: 322 GELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVD 381
Query: 1083 YSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIV 1262
YSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIV
Sbjct: 382 YSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIV 441
Query: 1263 WEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAV 1442
WEILQEVM+GHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAV
Sbjct: 442 WEILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAV 501
Query: 1443 HVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNP 1622
HVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNP
Sbjct: 502 HVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNP 561
Query: 1623 YNCRNSQNEKNRDNNYQYMKKKEP 1694
+NCRNS+NEK +NN +YMKKKEP
Sbjct: 562 FNCRNSKNEKISNNNSKYMKKKEP 585
Score = 208 bits (529), Expect(2) = 0.0
Identities = 97/101 (96%), Positives = 98/101 (97%)
Frame = +1
Query: 1696 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 1875
FFCNSYDAIGAYRQKRIN DSPFWLRWR+DQCIMSSREVPIEVHYES GTYYEIYGHYLV
Sbjct: 586 FFCNSYDAIGAYRQKRINLDSPFWLRWRIDQCIMSSREVPIEVHYESFGTYYEIYGHYLV 645
Query: 1876 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGF RAYSYGI
Sbjct: 646 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFSRAYSYGI 686
>AFR60050.1 RNA polymerase beta' subunit (plastid) [Medicago truncatula]
AFR60126.1 RNA polymerase beta' subunit (plastid)
[Medicago truncatula]
Length = 686
Score = 824 bits (2129), Expect(2) = 0.0
Identities = 414/444 (93%), Positives = 422/444 (95%), Gaps = 2/444 (0%)
Frame = +3
Query: 369 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 548
Y +FSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE
Sbjct: 142 YCDFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 201
Query: 549 QLVDLDLRIIMDSSLVEWKELGEEGSIDNENE--WEDRKVGRRKNFLVRRMELAKHFIRT 722
QLVDLDLRIIMDSSLVEWKELGE GS DNENE WEDRKVGRRKNFLVRRMEL KHFIRT
Sbjct: 202 QLVDLDLRIIMDSSLVEWKELGEGGSADNENENEWEDRKVGRRKNFLVRRMELVKHFIRT 261
Query: 723 NIEPEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTP 902
NIEPEWMV IIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTP
Sbjct: 262 NIEPEWMVLSLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTP 321
Query: 903 GELIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVD 1082
GEL+MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVD
Sbjct: 322 GELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVD 381
Query: 1083 YSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIV 1262
YSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIV
Sbjct: 382 YSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIV 441
Query: 1263 WEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAV 1442
WEILQEVM+GHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAV
Sbjct: 442 WEILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAV 501
Query: 1443 HVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNP 1622
HVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNP
Sbjct: 502 HVPLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNP 561
Query: 1623 YNCRNSQNEKNRDNNYQYMKKKEP 1694
+NCRNS+NEK +NN +YMKKKEP
Sbjct: 562 FNCRNSKNEKISNNNSKYMKKKEP 585
Score = 208 bits (529), Expect(2) = 0.0
Identities = 97/101 (96%), Positives = 98/101 (97%)
Frame = +1
Query: 1696 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 1875
FFCNSYDAIGAYRQKRIN DSPFWLRWR+DQCIMSSREVPIEVHYES GTYYEIYGHYLV
Sbjct: 586 FFCNSYDAIGAYRQKRINLDSPFWLRWRIDQCIMSSREVPIEVHYESFGTYYEIYGHYLV 645
Query: 1876 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGF RAYSYGI
Sbjct: 646 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFSRAYSYGI 686
>AJE71596.1 RNA polymerase beta ' subunit (plastid) [Melilotus officinalis]
AJE71667.1 RNA polymerase beta ' subunit (plastid)
[Melilotus albus]
Length = 684
Score = 824 bits (2128), Expect(2) = 0.0
Identities = 412/442 (93%), Positives = 420/442 (95%)
Frame = +3
Query: 369 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 548
Y +FSFARPVVKKPTFLRLRG FEYEIQSWKYSIP FFATQGFDTFRNREISSGAGAIRE
Sbjct: 142 YCDFSFARPVVKKPTFLRLRGLFEYEIQSWKYSIPPFFATQGFDTFRNREISSGAGAIRE 201
Query: 549 QLVDLDLRIIMDSSLVEWKELGEEGSIDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 728
QLVDLDLRIIMDSSLVEWKELGEEGS +NENEWEDRKVGRRKNFLVRRMELAKHFIRTNI
Sbjct: 202 QLVDLDLRIIMDSSLVEWKELGEEGSTNNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 261
Query: 729 EPEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 908
EPEWMV IIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSR TPGE
Sbjct: 262 EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRFTPGE 321
Query: 909 LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 1088
L+MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS
Sbjct: 322 LVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 381
Query: 1089 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 1268
GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE
Sbjct: 382 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 441
Query: 1269 ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV 1448
ILQEVM+GHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHV
Sbjct: 442 ILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHV 501
Query: 1449 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN 1628
PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNP+N
Sbjct: 502 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPFN 561
Query: 1629 CRNSQNEKNRDNNYQYMKKKEP 1694
CRNS+NEK +NN YMKKKEP
Sbjct: 562 CRNSKNEKISNNNSNYMKKKEP 583
Score = 203 bits (516), Expect(2) = 0.0
Identities = 94/100 (94%), Positives = 97/100 (97%)
Frame = +1
Query: 1699 FCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLVI 1878
FCNSYDAIGAYRQKRIN +SPFWLRWR+DQCIMSSR+VPIEVHYES GTYYEIYGHYLVI
Sbjct: 585 FCNSYDAIGAYRQKRINLESPFWLRWRIDQCIMSSRDVPIEVHYESFGTYYEIYGHYLVI 644
Query: 1879 RSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
RSIKKEIRCIYIRTTVGHISFYREIEEAIQGF RAYSYGI
Sbjct: 645 RSIKKEIRCIYIRTTVGHISFYREIEEAIQGFSRAYSYGI 684
>AIJ28041.1 RNA polymerase beta (chloroplast) [Trifolium lupinaster]
Length = 688
Score = 824 bits (2128), Expect(2) = 0.0
Identities = 413/442 (93%), Positives = 418/442 (94%)
Frame = +3
Query: 369 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 548
YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIP FFATQGFDTFRNREISSGAGAIRE
Sbjct: 146 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPPFFATQGFDTFRNREISSGAGAIRE 205
Query: 549 QLVDLDLRIIMDSSLVEWKELGEEGSIDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 728
QLVDLDLRIIMDSSLVEWKELGEEGS DNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI
Sbjct: 206 QLVDLDLRIIMDSSLVEWKELGEEGSTDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 265
Query: 729 EPEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 908
EPEWMV IIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE
Sbjct: 266 EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 325
Query: 909 LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 1088
+MCQEKLVQEAVDTLLDNGIRGQPMRDG NKVYKSFSDIIEGKEGRFRETLLGKRVDYS
Sbjct: 326 FVMCQEKLVQEAVDTLLDNGIRGQPMRDGQNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 385
Query: 1089 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 1268
GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE
Sbjct: 386 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 445
Query: 1269 ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV 1448
ILQEVM+GHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHV
Sbjct: 446 ILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHV 505
Query: 1449 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN 1628
PLSLEAQAEA LLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGI A RYNP+N
Sbjct: 506 PLSLEAQAEAHLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGIGATRYNPFN 565
Query: 1629 CRNSQNEKNRDNNYQYMKKKEP 1694
CRNSQNEK NN +YMKKKEP
Sbjct: 566 CRNSQNEKISKNNSKYMKKKEP 587
Score = 202 bits (513), Expect(2) = 0.0
Identities = 95/101 (94%), Positives = 97/101 (96%)
Frame = +1
Query: 1696 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 1875
FFCNSYDAIGAYRQKRINFDSPFWLRWR+DQCIMSSREVPIEVHYES GTYYEIY HYLV
Sbjct: 588 FFCNSYDAIGAYRQKRINFDSPFWLRWRIDQCIMSSREVPIEVHYESFGTYYEIYEHYLV 647
Query: 1876 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGF +A SYGI
Sbjct: 648 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFSQADSYGI 688
>YP_009109856.1 RNA polymerase beta (chloroplast) [Trifolium glanduliferum]
YP_009109931.1 RNA polymerase beta (chloroplast)
[Trifolium strictum] AIJ27896.1 RNA polymerase beta
(chloroplast) [Trifolium glanduliferum] AIJ28398.1 RNA
polymerase beta (chloroplast) [Trifolium strictum]
Length = 688
Score = 816 bits (2108), Expect(2) = 0.0
Identities = 408/442 (92%), Positives = 417/442 (94%)
Frame = +3
Query: 369 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 548
YPNFSFARPVVKKPTFLRLRGSF+YEIQSWKYSIP FFATQGFDTFRNREISSGAGAIRE
Sbjct: 146 YPNFSFARPVVKKPTFLRLRGSFDYEIQSWKYSIPPFFATQGFDTFRNREISSGAGAIRE 205
Query: 549 QLVDLDLRIIMDSSLVEWKELGEEGSIDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 728
QLVDLDLRIIMDSSLVEWKELGE S DNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI
Sbjct: 206 QLVDLDLRIIMDSSLVEWKELGEVESTDNENEWEDRKVGRRKNFLVRRMELAKHFIRTNI 265
Query: 729 EPEWMVXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGE 908
EPEWMV IIQIDGGKLMSSDINELYRRVIYRNNTL+DLLTTSRSTP E
Sbjct: 266 EPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLMDLLTTSRSTPEE 325
Query: 909 LIMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 1088
L+MCQEKLVQEAVDTLLDNGIRGQPMRDG NKVYKSFSDIIEGKEGRFRETLLGKRVDYS
Sbjct: 326 LVMCQEKLVQEAVDTLLDNGIRGQPMRDGQNKVYKSFSDIIEGKEGRFRETLLGKRVDYS 385
Query: 1089 GRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 1268
GRSVIVVGPSLSLH+CGLPRE+AIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE
Sbjct: 386 GRSVIVVGPSLSLHQCGLPREMAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWE 445
Query: 1269 ILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHV 1448
ILQEVM+GHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHV
Sbjct: 446 ILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHV 505
Query: 1449 PLSLEAQAEARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPYN 1628
PLSLEAQAEA LLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICA RYNP+N
Sbjct: 506 PLSLEAQAEAHLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICATRYNPFN 565
Query: 1629 CRNSQNEKNRDNNYQYMKKKEP 1694
CRNSQNEK NN +YMKKKEP
Sbjct: 566 CRNSQNEKISKNNSKYMKKKEP 587
Score = 207 bits (527), Expect(2) = 0.0
Identities = 97/101 (96%), Positives = 98/101 (97%)
Frame = +1
Query: 1696 FFCNSYDAIGAYRQKRINFDSPFWLRWRLDQCIMSSREVPIEVHYESLGTYYEIYGHYLV 1875
FFCNSYDAIGAYRQKRINFDSPFWLRWR+DQCIMSSREVPIEVHYES GTYYEIY HYLV
Sbjct: 588 FFCNSYDAIGAYRQKRINFDSPFWLRWRIDQCIMSSREVPIEVHYESFGTYYEIYEHYLV 647
Query: 1876 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFCRAYSYGI 1998
IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGF RAYSYGI
Sbjct: 648 IRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFSRAYSYGI 688