BLASTX nr result
ID: Glycyrrhiza34_contig00007374
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza34_contig00007374
(1121 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EPS74480.1 hypothetical protein M569_00269, partial [Genlisea au... 293 e-146
XP_015947541.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ... 276 e-144
XP_013443683.1 DNA-directed RNA polymerase subunit beta [Medicag... 232 e-117
ERM98365.1 hypothetical protein AMTR_s01499p00009870 [Amborella ... 248 e-106
ANQ46316.1 rpoC1 (chloroplast) [Pogostemon cablin] 299 4e-99
KJB30917.1 hypothetical protein B456_005G1677001, partial [Gossy... 304 6e-98
AON75821.1 RNA polymerase beta' subunit (chloroplast) [Populus a... 296 9e-98
AJO25103.1 RNA polymerase beta (chloroplast) [Solanum lycopersic... 296 9e-98
YP_009336368.1 RNA polymerase beta (chloroplast) [Nicotiana otop... 296 1e-97
YP_009049675.1 hypothetical protein (mitochondrion) [Capsicum an... 295 2e-97
BAC77550.1 RNA polymerase beta' subunit, partial (chloroplast) [... 294 3e-97
KJB23484.1 hypothetical protein B456_004G101400 [Gossypium raimo... 233 4e-97
AON75811.1 RNA polymerase beta' subunit (chloroplast) [Populus l... 294 5e-97
WP_071225033.1 hypothetical protein [Acinetobacter baumannii] OI... 293 7e-97
AII18577.1 RNA polymerase beta subunit (chloroplast) [Viburnum a... 293 1e-96
WP_042855006.1 hypothetical protein [Staphylococcus aureus] 292 3e-96
AII18578.1 RNA polymerase beta subunit (chloroplast) [Viburnum a... 291 6e-96
BAC77573.1 RNA polymerase beta' subunit, partial (chloroplast) [... 291 7e-96
AMO44331.1 RNA polymerase beta largest subunit, partial (chlorop... 291 8e-96
AQM54407.1 RNA polymerase beta' subunit, partial (chloroplast) [... 290 2e-95
>EPS74480.1 hypothetical protein M569_00269, partial [Genlisea aurea]
Length = 1213
Score = 293 bits (750), Expect(2) = e-146
Identities = 138/157 (87%), Positives = 144/157 (91%)
Frame = -3
Query: 696 EGSLIGLNHKFYSMIDQYKHQHLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTLHYKT 517
E SLIG+NH F SMID+YKHQ LRIGLVSP+QI AWA KILPNG+IVGEVTKPYT HYKT
Sbjct: 1057 EESLIGINHNFSSMIDRYKHQQLRIGLVSPEQIRAWATKILPNGKIVGEVTKPYTFHYKT 1116
Query: 516 NKPEKDGLFCERIFGPIKSGICACGNYRVIGDKKDQPKFCEQCGVEFVDSRIRRYQMGYI 337
NKPE DGLFCERIFGPIKSGICACGNYRVI D+KD P FCEQCGVEFVDSRIRRYQMGYI
Sbjct: 1117 NKPEMDGLFCERIFGPIKSGICACGNYRVIRDEKDGPNFCEQCGVEFVDSRIRRYQMGYI 1176
Query: 336 KLACPVTHVWYLKRLPSYIASLLDKTLKELEGLVYCD 226
KLACPVTHVWYLK LPSYIA+LLDK LKELEGLVYCD
Sbjct: 1177 KLACPVTHVWYLKCLPSYIANLLDKPLKELEGLVYCD 1213
Score = 254 bits (649), Expect(2) = e-146
Identities = 125/131 (95%), Positives = 127/131 (96%)
Frame = -1
Query: 1118 IFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLKGRAKQGGQRVG 939
IFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPL+GRAKQGGQRVG
Sbjct: 926 IFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVG 985
Query: 938 EMEVWALEGFGVAHILQEMLTYKSDHIKARQEVLGTTIIGGTIPKPVDAPESFRLLVREL 759
EMEVWALEGFGVAHILQEMLTYKSDHI+ARQEVLGTTIIGGTIP P D PESFRLLVREL
Sbjct: 986 EMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIPNPQDTPESFRLLVREL 1045
Query: 758 RSLALELNHFL 726
RSLALELNH L
Sbjct: 1046 RSLALELNHCL 1056
>XP_015947541.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit
beta'-like [Arachis duranensis]
Length = 1330
Score = 276 bits (705), Expect(2) = e-144
Identities = 130/143 (90%), Positives = 135/143 (94%), Gaps = 1/143 (0%)
Frame = -3
Query: 648 QYKHQHLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTLHYKTNKPEKDGLFCERIFGP 469
+YKH+ LRIG VSPQQI AWAKKILPNGEIVGEVTKPYT HYKTNKPEKDGLFCERIFGP
Sbjct: 622 EYKHKQLRIGSVSPQQIIAWAKKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGP 681
Query: 468 IKSGICACGNYRVIGD-KKDQPKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRL 292
+KSGICACGNYRVIG+ KKD KFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRL
Sbjct: 682 VKSGICACGNYRVIGEKKKDNQKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRL 741
Query: 291 PSYIASLLDKTLKELEGLVYCDV 223
PSYIA+LLDK LKELEGLVYCDV
Sbjct: 742 PSYIANLLDKPLKELEGLVYCDV 764
Score = 267 bits (682), Expect(2) = e-144
Identities = 132/143 (92%), Positives = 137/143 (95%)
Frame = -1
Query: 1118 IFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLKGRAKQGGQRVG 939
IFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRS GHYALVTQQPL+GRAKQGGQRVG
Sbjct: 480 IFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSCGHYALVTQQPLRGRAKQGGQRVG 539
Query: 938 EMEVWALEGFGVAHILQEMLTYKSDHIKARQEVLGTTIIGGTIPKPVDAPESFRLLVREL 759
EMEVWALEGFGVAHILQEMLTYKSDHIKARQ VL TTIIG TIPKP +APESFRLLVREL
Sbjct: 540 EMEVWALEGFGVAHILQEMLTYKSDHIKARQIVLATTIIGRTIPKPANAPESFRLLVREL 599
Query: 758 RSLALELNHFLVSEKDFQIQRKE 690
RSLA+ELNHFLVSEK+F+I RKE
Sbjct: 600 RSLAMELNHFLVSEKNFRIHRKE 622
>XP_013443683.1 DNA-directed RNA polymerase subunit beta [Medicago truncatula]
KEH17708.1 DNA-directed RNA polymerase subunit beta
[Medicago truncatula]
Length = 3148
Score = 232 bits (592), Expect(2) = e-117
Identities = 114/138 (82%), Positives = 126/138 (91%)
Frame = -1
Query: 1118 IFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLKGRAKQGGQRVG 939
IFDGRTG+PFEQPV+IGK YILKLIHQVD+KIHGRS+G Y+LVTQQP++GRAKQGGQRVG
Sbjct: 985 IFDGRTGDPFEQPVLIGKSYILKLIHQVDEKIHGRSTGPYSLVTQQPVRGRAKQGGQRVG 1044
Query: 938 EMEVWALEGFGVAHILQEMLTYKSDHIKARQEVLGTTIIGGTIPKPVDAPESFRLLVREL 759
EMEVWALEGFGVAHILQE+LTYKSDH+ ARQE+L TI G IP D PESFR+LVREL
Sbjct: 1045 EMEVWALEGFGVAHILQEILTYKSDHLIARQEILNATIWGKRIPNHEDPPESFRVLVREL 1104
Query: 758 RSLALELNHFLVSEKDFQ 705
RSLALELNHFLVSEK+FQ
Sbjct: 1105 RSLALELNHFLVSEKNFQ 1122
Score = 218 bits (554), Expect(2) = e-117
Identities = 103/138 (74%), Positives = 114/138 (82%)
Frame = -3
Query: 618 LVSPQQISAWAKKILPNGEIVGEVTKPYTLHYKTNKPEKDGLFCERIFGPIKSGICACGN 439
LVS + AWA K LPNGE VGEVT+P T HYKT+KPEKDGLFCERIFGPIKSGIC CGN
Sbjct: 1115 LVSEKNFQAWANKNLPNGEAVGEVTRPSTFHYKTDKPEKDGLFCERIFGPIKSGICGCGN 1174
Query: 438 YRVIGDKKDQPKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIASLLDKT 259
R G + + +FC++CGVEFVDSRIRRYQMGYIKLACPVTHVWYLK LPSYIA+LLDK
Sbjct: 1175 SRASGAENEDERFCQKCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKGLPSYIANLLDKP 1234
Query: 258 LKELEGLVYCDV*FDQNS 205
LK+LEGLVY D F + S
Sbjct: 1235 LKKLEGLVYGDFSFARPS 1252
>ERM98365.1 hypothetical protein AMTR_s01499p00009870 [Amborella trichopoda]
Length = 351
Score = 248 bits (633), Expect(2) = e-106
Identities = 123/142 (86%), Positives = 132/142 (92%)
Frame = -1
Query: 1118 IFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLKGRAKQGGQRVG 939
IFDGRTG+PFEQPVIIG+ Y+LKLIHQVD+KIHGRSSGHYALVTQQPL+GRAKQG QRVG
Sbjct: 89 IFDGRTGDPFEQPVIIGQSYMLKLIHQVDEKIHGRSSGHYALVTQQPLRGRAKQGAQRVG 148
Query: 938 EMEVWALEGFGVAHILQEMLTYKSDHIKARQEVLGTTIIGGTIPKPVDAPESFRLLVREL 759
EMEVWALEGFGVAHILQEMLTYKSD I+A +E LGT I+GGTIPKP APESFRLLVREL
Sbjct: 149 EMEVWALEGFGVAHILQEMLTYKSDPIRALKEQLGTMIVGGTIPKPEGAPESFRLLVREL 208
Query: 758 RSLALELNHFLVSEKDFQIQRK 693
RSLALEL HFLVSEK+FQI RK
Sbjct: 209 RSLALELKHFLVSEKNFQINRK 230
Score = 166 bits (420), Expect(2) = e-106
Identities = 76/95 (80%), Positives = 83/95 (87%)
Frame = -3
Query: 684 IGLNHKFYSMIDQYKHQHLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTLHYKTNKPE 505
+G+N F SMID+YKHQ LRIGLVSPQQ +AWA KILPNGE+VGEVTKPYT HYK+NKPE
Sbjct: 231 VGMNQNFSSMIDRYKHQQLRIGLVSPQQRTAWANKILPNGEMVGEVTKPYTFHYKSNKPE 290
Query: 504 KDGLFCERIFGPIKSGICACGNYRVIGDKKDQPKF 400
KDGLFCERIFGPIKSGICACGNY VIGD+K F
Sbjct: 291 KDGLFCERIFGPIKSGICACGNYGVIGDEKKTRNF 325
>ANQ46316.1 rpoC1 (chloroplast) [Pogostemon cablin]
Length = 152
Score = 299 bits (766), Expect = 4e-99
Identities = 140/152 (92%), Positives = 144/152 (94%)
Frame = -3
Query: 678 LNHKFYSMIDQYKHQHLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTLHYKTNKPEKD 499
+N FYSMID YKHQ LRIGLVSPQQISAWA KILPNGEIVGEVTKPYT HYKTNKPEKD
Sbjct: 1 MNPNFYSMIDWYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 498 GLFCERIFGPIKSGICACGNYRVIGDKKDQPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 319
GLFCERIFGPIKSGICACGNYRVIGD+K+ PKFCEQCGVEFVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 318 THVWYLKRLPSYIASLLDKTLKELEGLVYCDV 223
THVWYLKRLPSYIA+LLDK LKELEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152
>KJB30917.1 hypothetical protein B456_005G1677001, partial [Gossypium
raimondii]
Length = 370
Score = 304 bits (779), Expect = 6e-98
Identities = 151/187 (80%), Positives = 159/187 (85%), Gaps = 7/187 (3%)
Frame = -3
Query: 762 TTIFGS-------GTESFPCI*ERLPDSKEGSLIGLNHKFYSMIDQYKHQHLRIGLVSPQ 604
TTI G ESF + L S EGSLIG+N F SMID+YKHQ LRIG VSPQ
Sbjct: 185 TTIIGGTIPKPEDAPESFRLLVRELR-SLEGSLIGMNQNFSSMIDRYKHQQLRIGSVSPQ 243
Query: 603 QISAWAKKILPNGEIVGEVTKPYTLHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIG 424
QISAWAKKILPNGE VGEVTKPYT HYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIG
Sbjct: 244 QISAWAKKILPNGETVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIG 303
Query: 423 DKKDQPKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIASLLDKTLKELE 244
++K+ PKFCEQCGVEFVDSRIRRYQMGYI+LACPVTHVWYLKRLPSYIA+LLDK LKELE
Sbjct: 304 NQKEGPKFCEQCGVEFVDSRIRRYQMGYIRLACPVTHVWYLKRLPSYIANLLDKPLKELE 363
Query: 243 GLVYCDV 223
GLVYCDV
Sbjct: 364 GLVYCDV 370
Score = 241 bits (616), Expect = 2e-73
Identities = 118/123 (95%), Positives = 121/123 (98%)
Frame = -1
Query: 1118 IFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLKGRAKQGGQRVG 939
IFDGRTG PFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPL+GR+KQGGQRVG
Sbjct: 90 IFDGRTGGPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRSKQGGQRVG 149
Query: 938 EMEVWALEGFGVAHILQEMLTYKSDHIKARQEVLGTTIIGGTIPKPVDAPESFRLLVREL 759
EMEVWALEGFGVAHILQEMLTYKSDHI+ARQEVLGTTIIGGTIPKP DAPESFRLLVREL
Sbjct: 150 EMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIPKPEDAPESFRLLVREL 209
Query: 758 RSL 750
RSL
Sbjct: 210 RSL 212
>AON75821.1 RNA polymerase beta' subunit (chloroplast) [Populus adenopoda]
AQM54413.1 RNA polymerase beta' subunit, partial
(chloroplast) [Populus tomentosa]
Length = 152
Score = 296 bits (757), Expect = 9e-98
Identities = 136/152 (89%), Positives = 144/152 (94%)
Frame = -3
Query: 678 LNHKFYSMIDQYKHQHLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTLHYKTNKPEKD 499
+N F+SMID+YKHQ LRIG VSPQQISAW KILPNGEIVGEVTKPYT HYKTNKPEKD
Sbjct: 1 MNQNFFSMIDRYKHQQLRIGSVSPQQISAWTNKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 498 GLFCERIFGPIKSGICACGNYRVIGDKKDQPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 319
GLFCERIFGPIKSGICACGNYRVIGD+K++PKFCEQCGVEFVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEEPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 318 THVWYLKRLPSYIASLLDKTLKELEGLVYCDV 223
THVWYLKRLPSYIA+LLDK LK+LEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKQLEGLVYCDV 152
>AJO25103.1 RNA polymerase beta (chloroplast) [Solanum lycopersicum] ALN11564.1
RNA polymerase beta (chloroplast) [Iochroma edule]
AMX21679.1 RNA polymerase beta (chloroplast) [Iochroma
parvifolium]
Length = 152
Score = 296 bits (757), Expect = 9e-98
Identities = 138/152 (90%), Positives = 144/152 (94%)
Frame = -3
Query: 678 LNHKFYSMIDQYKHQHLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTLHYKTNKPEKD 499
+N+ F SMID+YKHQ LRIG VSPQQISAWA KILPNGEIVGEVTKPYT HYKTNKPEKD
Sbjct: 1 MNNNFSSMIDRYKHQQLRIGSVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 498 GLFCERIFGPIKSGICACGNYRVIGDKKDQPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 319
GLFCERIFGPIKSGICACGNYRVIGD+K+ PKFCEQCGVEFVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 318 THVWYLKRLPSYIASLLDKTLKELEGLVYCDV 223
THVWYLKRLPSYIA+LLDK LKELEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152
>YP_009336368.1 RNA polymerase beta (chloroplast) [Nicotiana otophora] ALT14463.1
RNA polymerase beta (chloroplast) [Nicotiana otophora]
Length = 155
Score = 296 bits (757), Expect = 1e-97
Identities = 139/155 (89%), Positives = 145/155 (93%)
Frame = -3
Query: 678 LNHKFYSMIDQYKHQHLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTLHYKTNKPEKD 499
+N+ F SMID+YKHQ LRIG VSPQQISAWA KILPNGEIVGEVTKPYT HYKTNKPEKD
Sbjct: 1 MNNNFSSMIDRYKHQQLRIGSVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 498 GLFCERIFGPIKSGICACGNYRVIGDKKDQPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 319
GLFCERIFGPIKSGICACGNYRVI D+K+ PKFCEQCGVEFVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIEDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 318 THVWYLKRLPSYIASLLDKTLKELEGLVYCDV*FD 214
THVWYLKRLPSYIA+LLDK LKELEGLVYCDV FD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDVSFD 155
>YP_009049675.1 hypothetical protein (mitochondrion) [Capsicum annuum]
YP_009049784.1 hypothetical protein (mitochondrion)
[Capsicum annuum] AIG89836.1 hypothetical protein
(mitochondrion) [Capsicum annuum] AIG90033.1
hypothetical protein (mitochondrion) [Capsicum annuum]
AIG90142.1 hypothetical protein (mitochondrion)
[Capsicum annuum]
Length = 152
Score = 295 bits (755), Expect = 2e-97
Identities = 138/152 (90%), Positives = 143/152 (94%)
Frame = -3
Query: 678 LNHKFYSMIDQYKHQHLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTLHYKTNKPEKD 499
+N F SMID+YKHQ LRIG VSPQQISAWA KILPNGEIVGEVTKPYT HYKTNKPEKD
Sbjct: 1 MNKNFSSMIDRYKHQQLRIGSVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 498 GLFCERIFGPIKSGICACGNYRVIGDKKDQPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 319
GLFCERIFGPIKSGICACGNYRVIGD+K+ PKFCEQCGVEFVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 318 THVWYLKRLPSYIASLLDKTLKELEGLVYCDV 223
THVWYLKRLPSYIA+LLDK LKELEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152
>BAC77550.1 RNA polymerase beta' subunit, partial (chloroplast) [Nicotiana
sylvestris]
Length = 150
Score = 294 bits (753), Expect = 3e-97
Identities = 137/150 (91%), Positives = 143/150 (95%)
Frame = -3
Query: 678 LNHKFYSMIDQYKHQHLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTLHYKTNKPEKD 499
+N+ F SMID+YKHQ LRIGLVSPQQISAWA KILPNGEIVGEVTKPYT HYKTNKPEKD
Sbjct: 1 MNNNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 498 GLFCERIFGPIKSGICACGNYRVIGDKKDQPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 319
GLFCERIFGPIKSGICACGNYRVIGD+K+ PKFCEQCGVEFVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 318 THVWYLKRLPSYIASLLDKTLKELEGLVYC 229
THVWYLKRLPSYIA+LLDK LKELEGLVYC
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYC 150
>KJB23484.1 hypothetical protein B456_004G101400 [Gossypium raimondii]
Length = 386
Score = 233 bits (594), Expect(2) = 4e-97
Identities = 114/123 (92%), Positives = 117/123 (95%)
Frame = -1
Query: 1118 IFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLKGRAKQGGQRVG 939
IFDGR G PFEQPVIIGKPYILKLIHQVDDKIHG SSGHYALVTQQPL+GR+KQGGQRVG
Sbjct: 181 IFDGRMGGPFEQPVIIGKPYILKLIHQVDDKIHGHSSGHYALVTQQPLRGRSKQGGQRVG 240
Query: 938 EMEVWALEGFGVAHILQEMLTYKSDHIKARQEVLGTTIIGGTIPKPVDAPESFRLLVREL 759
EMEVWALEGFGVAHILQEMLTYKSDHI+A QEVLGTTIIGGTIPKP D PESFRLLVREL
Sbjct: 241 EMEVWALEGFGVAHILQEMLTYKSDHIRAHQEVLGTTIIGGTIPKPEDDPESFRLLVREL 300
Query: 758 RSL 750
RSL
Sbjct: 301 RSL 303
Score = 151 bits (382), Expect(2) = 4e-97
Identities = 73/85 (85%), Positives = 76/85 (89%)
Frame = -3
Query: 702 SKEGSLIGLNHKFYSMIDQYKHQHLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTLHY 523
S EGSLIG+N F SMID+YKHQ LRIG VS QQISAWAKKILPNGEIVGEVTKPYT HY
Sbjct: 302 SLEGSLIGMNQNFSSMIDRYKHQQLRIGSVSSQQISAWAKKILPNGEIVGEVTKPYTFHY 361
Query: 522 KTNKPEKDGLFCERIFGPIKSGICA 448
KTNKPE+DGLFCERIFGPIKSGI A
Sbjct: 362 KTNKPERDGLFCERIFGPIKSGIYA 386
>AON75811.1 RNA polymerase beta' subunit (chloroplast) [Populus lasiocarpa]
AON75813.1 RNA polymerase beta' subunit (chloroplast)
[Populus tremuloides] AON75815.1 RNA polymerase beta'
subunit (chloroplast) [Populus tremula] AON75817.1 RNA
polymerase beta' subunit (chloroplast) [Populus
davidiana] AON75819.1 RNA polymerase beta' subunit
(chloroplast) [Populus euphratica] AON75823.1 RNA
polymerase beta' subunit (chloroplast) [Salix
arbutifolia] AON75825.1 RNA polymerase beta' subunit
(chloroplast) [Salix triandra] AON75827.1 RNA polymerase
beta' subunit (chloroplast) [Populus grandidentata]
AON75829.1 RNA polymerase beta' subunit (chloroplast)
[Populus hopeiensis] AQM54375.1 RNA polymerase beta'
subunit, partial (chloroplast) [Populus trichocarpa]
AQM54377.1 RNA polymerase beta' subunit, partial
(chloroplast) [Populus heterophylla] AQM54379.1 RNA
polymerase beta' subunit, partial (chloroplast) [Populus
ilicifolia] AQM54381.1 RNA polymerase beta' subunit,
partial (chloroplast) [Populus deltoides] AQM54383.1 RNA
polymerase beta' subunit, partial (chloroplast) [Populus
nigra] AQM54385.1 RNA polymerase beta' subunit, partial
(chloroplast) [Populus pruinosa] AQM54387.1 RNA
polymerase beta' subunit, partial (chloroplast) [Populus
balsamifera] AQM54389.1 RNA polymerase beta' subunit,
partial (chloroplast) [Populus angustifolia] AQM54391.1
RNA polymerase beta' subunit, partial (chloroplast)
[Populus mexicana] AQM54393.1 RNA polymerase beta'
subunit, partial (chloroplast) [Populus fremontii]
AQM54395.1 RNA polymerase beta' subunit, partial
(chloroplast) [Populus wilsonii] AQM54397.1 RNA
polymerase beta' subunit, partial (chloroplast) [Populus
pamirica] AQM54399.1 RNA polymerase beta' subunit,
partial (chloroplast) [Populus szechuanica] AQM54401.1
RNA polymerase beta' subunit, partial (chloroplast)
[Populus suaveolens] AQM54403.1 RNA polymerase beta'
subunit, partial (chloroplast) [Populus laurifolia]
AQM54405.1 RNA polymerase beta' subunit, partial
(chloroplast) [Populus przewalskii] AQM54409.1 RNA
polymerase beta' subunit, partial (chloroplast) [Populus
simonii] AQM54411.1 RNA polymerase beta' subunit,
partial (chloroplast) [Populus talassica] AQM54415.1 RNA
polymerase beta' subunit, partial (chloroplast) [Populus
afghanica] AQM54417.1 RNA polymerase beta' subunit,
partial (chloroplast) [Populus alba]
Length = 152
Score = 294 bits (752), Expect = 5e-97
Identities = 136/152 (89%), Positives = 143/152 (94%)
Frame = -3
Query: 678 LNHKFYSMIDQYKHQHLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTLHYKTNKPEKD 499
+N F SMID+YKHQ LRIG VSPQQISAW KILPNGEIVGEVTKPYT HYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGSVSPQQISAWTNKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 498 GLFCERIFGPIKSGICACGNYRVIGDKKDQPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 319
GLFCERIFGPIKSGICACGNYRVIGD+K++PKFCEQCGVEFVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEEPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 318 THVWYLKRLPSYIASLLDKTLKELEGLVYCDV 223
THVWYLKRLPSYIA+LLDK LK+LEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKQLEGLVYCDV 152
>WP_071225033.1 hypothetical protein [Acinetobacter baumannii] OIG08158.1
hypothetical protein A7M85_20170 [Acinetobacter
baumannii]
Length = 152
Score = 293 bits (751), Expect = 7e-97
Identities = 137/152 (90%), Positives = 142/152 (93%)
Frame = -3
Query: 678 LNHKFYSMIDQYKHQHLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTLHYKTNKPEKD 499
+NHK MID YKHQ LRIGLVSPQQISAWA KI+PNGEIVGEVTKPYT HYKTNKPEKD
Sbjct: 1 MNHKISYMIDLYKHQQLRIGLVSPQQISAWATKIIPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 498 GLFCERIFGPIKSGICACGNYRVIGDKKDQPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 319
GLFCERIFGPIKSGICACGNYRVIGD+K+ PKFCEQCGVEFVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 318 THVWYLKRLPSYIASLLDKTLKELEGLVYCDV 223
THVWYLK LPSYIA+LLDK LKELEGLVYCDV
Sbjct: 121 THVWYLKGLPSYIANLLDKPLKELEGLVYCDV 152
>AII18577.1 RNA polymerase beta subunit (chloroplast) [Viburnum acerifolium]
AII18579.1 RNA polymerase beta subunit (chloroplast)
[Viburnum carlesii] AII18580.1 RNA polymerase beta
subunit (chloroplast) [Viburnum cassinoides] AII18581.1
RNA polymerase beta subunit (chloroplast) [Viburnum
clemensae] AII18582.1 RNA polymerase beta subunit
(chloroplast) [Viburnum cylindricum] AII18583.1 RNA
polymerase beta subunit (chloroplast) [Viburnum
dentatum] AII18584.1 RNA polymerase beta subunit
(chloroplast) [Viburnum dilatatum] AII18585.1 RNA
polymerase beta subunit (chloroplast) [Viburnum
erubescens] AII18586.1 RNA polymerase beta subunit
(chloroplast) [Viburnum grandiflorum] AII18587.1 RNA
polymerase beta subunit (chloroplast) [Viburnum
lantanoides] AII18588.1 RNA polymerase beta subunit
(chloroplast) [Viburnum lentago] AII18589.1 RNA
polymerase beta subunit (chloroplast) [Viburnum
lutescens] AII18590.1 RNA polymerase beta subunit
(chloroplast) [Viburnum molle] AII18591.1 RNA polymerase
beta subunit (chloroplast) [Viburnum opulus] AII18592.1
RNA polymerase beta subunit (chloroplast) [Viburnum
plicatum] AII18593.1 RNA polymerase beta subunit
(chloroplast) [Viburnum punctatum] AII18594.1 RNA
polymerase beta subunit (chloroplast) [Viburnum
sieboldii] AII18595.1 RNA polymerase beta subunit
(chloroplast) [Viburnum taiwanianum] AII18596.1 RNA
polymerase beta subunit (chloroplast) [Viburnum tinus]
AII18597.1 RNA polymerase beta subunit (chloroplast)
[Viburnum triphyllum] AII18598.1 RNA polymerase beta
subunit (chloroplast) [Viburnum vernicosum]
Length = 152
Score = 293 bits (749), Expect = 1e-96
Identities = 136/152 (89%), Positives = 141/152 (92%)
Frame = -3
Query: 678 LNHKFYSMIDQYKHQHLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTLHYKTNKPEKD 499
+N F SMID+YKHQ LRIG VSPQQIS WA KILPNGEIVGEVTKPYT HYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGSVSPQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 498 GLFCERIFGPIKSGICACGNYRVIGDKKDQPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 319
GLFCERIFGPIKSGIC CGNYRVIGD+K+ PKFCEQCGVEFVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICTCGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 318 THVWYLKRLPSYIASLLDKTLKELEGLVYCDV 223
THVWYLKRLPSYIA+LLDK LKELEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152
>WP_042855006.1 hypothetical protein [Staphylococcus aureus]
Length = 152
Score = 292 bits (747), Expect = 3e-96
Identities = 136/152 (89%), Positives = 143/152 (94%)
Frame = -3
Query: 678 LNHKFYSMIDQYKHQHLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTLHYKTNKPEKD 499
+N F SMID+YKHQ LRIG VSPQQISAWAKKILPNGE VGEVTKPYT HYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGSVSPQQISAWAKKILPNGETVGEVTKPYTFHYKTNKPEKD 60
Query: 498 GLFCERIFGPIKSGICACGNYRVIGDKKDQPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 319
GLFCERIFGPIKSGICACGNYRVIG++K+ PKFCEQCGVEFVDSRIRRYQMGYI+LACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGNQKEGPKFCEQCGVEFVDSRIRRYQMGYIRLACPV 120
Query: 318 THVWYLKRLPSYIASLLDKTLKELEGLVYCDV 223
THVWYLKRLPSYIA+LLDK LKELEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152
>AII18578.1 RNA polymerase beta subunit (chloroplast) [Viburnum amplificatum]
Length = 152
Score = 291 bits (745), Expect = 6e-96
Identities = 135/152 (88%), Positives = 141/152 (92%)
Frame = -3
Query: 678 LNHKFYSMIDQYKHQHLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTLHYKTNKPEKD 499
+N F SMID+YKHQ LRIG VSPQQIS WA KILPNGEIVGEVTKPYT HYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGSVSPQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 498 GLFCERIFGPIKSGICACGNYRVIGDKKDQPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 319
GLFCERIFGPIKSGIC CGNYRVIG++K+ PKFCEQCGVEFVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICTCGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 318 THVWYLKRLPSYIASLLDKTLKELEGLVYCDV 223
THVWYLKRLPSYIA+LLDK LKELEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152
>BAC77573.1 RNA polymerase beta' subunit, partial (chloroplast) [Nicotiana
tomentosiformis]
Length = 149
Score = 291 bits (744), Expect = 7e-96
Identities = 136/149 (91%), Positives = 142/149 (95%)
Frame = -3
Query: 678 LNHKFYSMIDQYKHQHLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTLHYKTNKPEKD 499
+N+ F SMID+YKHQ LRIGLVSPQQISAWA KILPNGEIVGEVTKPYT HYKTNKPEKD
Sbjct: 1 MNNNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 498 GLFCERIFGPIKSGICACGNYRVIGDKKDQPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 319
GLFCERIFGPIKSGICACGNYRVIGD+K+ PKFCEQCGVEFVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 318 THVWYLKRLPSYIASLLDKTLKELEGLVY 232
THVWYLKRLPSYIA+LLDK LKELEGLVY
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVY 149
>AMO44331.1 RNA polymerase beta largest subunit, partial (chloroplast) [Panax
ginseng] AMO44333.1 RNA polymerase beta largest subunit,
partial (chloroplast) [Panax ginseng]
Length = 151
Score = 291 bits (744), Expect = 8e-96
Identities = 135/151 (89%), Positives = 141/151 (93%)
Frame = -3
Query: 678 LNHKFYSMIDQYKHQHLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTLHYKTNKPEKD 499
+N F SMID+YKHQ LRIG VSPQQIS WA KILPNGEIVGEVTKPYT HYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGSVSPQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 498 GLFCERIFGPIKSGICACGNYRVIGDKKDQPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 319
GLFCERIFGPIKSGICACGNYRVIG++K+ PKFCEQCGVEFVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGNEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 318 THVWYLKRLPSYIASLLDKTLKELEGLVYCD 226
THVWYLKRLPSYIA+LLDK LKELEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 151
>AQM54407.1 RNA polymerase beta' subunit, partial (chloroplast) [Populus
ussuriensis]
Length = 152
Score = 290 bits (741), Expect = 2e-95
Identities = 134/152 (88%), Positives = 142/152 (93%)
Frame = -3
Query: 678 LNHKFYSMIDQYKHQHLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTLHYKTNKPEKD 499
+N F SMID+YKHQ LRIG VSPQQISAW KILPNGEIVGEVTKPYT HYKTNKPEKD
Sbjct: 1 MNQNFSSMIDRYKHQQLRIGSVSPQQISAWTNKILPNGEIVGEVTKPYTFHYKTNKPEKD 60
Query: 498 GLFCERIFGPIKSGICACGNYRVIGDKKDQPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 319
GLFCERIFGPIKSGICACGNYRVIG++K++PKFCEQCGVEFVDSRIRRYQMGYIKLACPV
Sbjct: 61 GLFCERIFGPIKSGICACGNYRVIGEEKEEPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120
Query: 318 THVWYLKRLPSYIASLLDKTLKELEGLVYCDV 223
THVWYLKRLPSYIA+LLDK K+LEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPPKQLEGLVYCDV 152