BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza33_contig00020406
         (560 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003619152.2 RNA polymerase beta chain, putative [Medicago tru...    54   9e-14
GAU11972.1 hypothetical protein TSUD_195960 [Trifolium subterran...    52   8e-06

>XP_003619152.2 RNA polymerase beta chain, putative [Medicago truncatula]
           AES75370.2 RNA polymerase beta chain, putative [Medicago
           truncatula]
          Length = 143

 Score = 53.9 bits (128), Expect(2) = 9e-14
 Identities = 23/27 (85%), Positives = 27/27 (100%)
 Frame = +3

Query: 432 NIKEEIEDHSRILSDLCQHRTRSPLLK 512
           NIKEE+EDHSRILSDLC+HRTRSPL++
Sbjct: 41  NIKEEVEDHSRILSDLCRHRTRSPLVQ 67



 Score = 50.1 bits (118), Expect(2) = 9e-14
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = +1

Query: 340 NSWNFLLISFFLKKHSPLTRSLIELSIER 426
           N  +F+LISFFLKKHSP TRSLIELSIER
Sbjct: 12  NGISFILISFFLKKHSPFTRSLIELSIER 40


>GAU11972.1 hypothetical protein TSUD_195960 [Trifolium subterraneum]
          Length = 86

 Score = 52.0 bits (123), Expect = 8e-06
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = +3

Query: 429 INIKEEIEDHSRILSDLCQHRTRSP 503
           +NIKEE+EDHSRILSDLCQHRTR P
Sbjct: 52  LNIKEEVEDHSRILSDLCQHRTRPP 76