BLASTX nr result

ID: Glycyrrhiza33_contig00020380 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza33_contig00020380
         (466 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU19268.1 hypothetical protein TSUD_335530 [Trifolium subterran...    75   3e-21
KJB09793.1 hypothetical protein B456_001G166700 [Gossypium raimo...    54   4e-13

>GAU19268.1 hypothetical protein TSUD_335530 [Trifolium subterraneum]
          Length = 220

 Score = 75.1 bits (183), Expect(2) = 3e-21
 Identities = 41/61 (67%), Positives = 43/61 (70%), Gaps = 4/61 (6%)
 Frame = -1

Query: 403 QSLACDCSHSPKKGETRESSAPVHVTNRTSLGPE----FCEPPDLDQDLHYVVRSEELTF 236
           QSLACDCSHS KKGETRESSAPVHVTNRTSLGP+       P         + RSEELTF
Sbjct: 88  QSLACDCSHSRKKGETRESSAPVHVTNRTSLGPDRILRTTGPRPRSPLRRTIYRSEELTF 147

Query: 235 S 233
           S
Sbjct: 148 S 148



 Score = 53.9 bits (128), Expect(2) = 3e-21
 Identities = 23/25 (92%), Positives = 23/25 (92%)
 Frame = -2

Query: 465 LRPSPERPAYPACAFGAPHSFNHLL 391
           LRPSPERPAYPACAFGAPHSFN  L
Sbjct: 66  LRPSPERPAYPACAFGAPHSFNQSL 90



 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -3

Query: 104 AELVVTRSSLVPILVKSFRSDSTLHTIF 21
           +ELVVTRSSLVPILVKSFRSDSTLHTIF
Sbjct: 149 SELVVTRSSLVPILVKSFRSDSTLHTIF 176


>KJB09793.1 hypothetical protein B456_001G166700 [Gossypium raimondii]
          Length = 636

 Score = 53.9 bits (128), Expect(2) = 4e-13
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = +3

Query: 156 KRKGAKRTCVKQPSITLDRSRMDDLQLKV 242
           KR+  KRTCVKQPSITLDRSRMD+LQLKV
Sbjct: 55  KRRATKRTCVKQPSITLDRSRMDNLQLKV 83



 Score = 47.8 bits (112), Expect(2) = 4e-13
 Identities = 22/31 (70%), Positives = 25/31 (80%)
 Frame = +1

Query: 253 IVRRNGDLGLGPVVRRIRDLTMFDSSHERER 345
           +VRRNGDLGL PVVRRIRDLTMF    E ++
Sbjct: 90  LVRRNGDLGLDPVVRRIRDLTMFACEFEEDK 120


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