BLASTX nr result
ID: Glycyrrhiza33_contig00020127
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza33_contig00020127
(404 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU10400.1 hypothetical protein TSUD_423410, partial [Trifolium ... 75 8e-15
GAU39885.1 hypothetical protein TSUD_69330 [Trifolium subterraneum] 76 1e-14
GAU20193.1 hypothetical protein TSUD_352570 [Trifolium subterran... 70 2e-12
GAU22350.1 hypothetical protein TSUD_106780 [Trifolium subterran... 54 2e-10
GAU49954.1 hypothetical protein TSUD_180180 [Trifolium subterran... 58 2e-10
GAU17063.1 hypothetical protein TSUD_105620 [Trifolium subterran... 53 2e-10
ABE80156.1 Ribonuclease H [Medicago truncatula] 55 2e-10
ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); ... 61 3e-10
GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum] 57 6e-10
GAU11845.1 hypothetical protein TSUD_75960 [Trifolium subterraneum] 56 1e-09
ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); ... 58 2e-09
GAU41508.1 hypothetical protein TSUD_302460 [Trifolium subterran... 55 3e-09
GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterran... 54 3e-09
GAU16251.1 hypothetical protein TSUD_298830 [Trifolium subterran... 61 3e-09
ABD32401.2 Ribonuclease H, partial [Medicago truncatula] 54 4e-09
GAU26057.1 hypothetical protein TSUD_225190 [Trifolium subterran... 57 1e-08
XP_013453903.1 hypothetical protein MTR_5g049720 [Medicago trunc... 51 1e-08
GAU40444.1 hypothetical protein TSUD_397630 [Trifolium subterran... 52 1e-08
ABD33150.1 Polynucleotidyl transferase, Ribonuclease H fold [Med... 58 2e-08
GAU50029.1 hypothetical protein TSUD_240220 [Trifolium subterran... 55 2e-08
>GAU10400.1 hypothetical protein TSUD_423410, partial [Trifolium subterraneum]
Length = 284
Score = 74.7 bits (182), Expect(2) = 8e-15
Identities = 32/56 (57%), Positives = 39/56 (69%)
Frame = +1
Query: 211 RWVTWHESCEETTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGGFAGTLELLTISL 378
RW++WH + VLNVD SCLG+PGRAGFGGL R G G W+ GF+G L + I L
Sbjct: 115 RWISWHPCKTDCVVLNVDGSCLGDPGRAGFGGLFRKGDGEWIRGFSGYLGVTNIML 170
Score = 32.7 bits (73), Expect(2) = 8e-15
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +3
Query: 18 WIRLGAEGPNPYLFFAGLWSAWLKRNAESIAMDIVNLFNSVWEACGLAATLFNSYHAQ 191
W+R + G N F AGLW W RN + ++ F V E L A + + A+
Sbjct: 50 WLRNNSIGLNAPTFLAGLWWNWRARNIFCVGNASIHSFKVVAEVSKLVALIVFCFPAR 107
>GAU39885.1 hypothetical protein TSUD_69330 [Trifolium subterraneum]
Length = 178
Score = 75.9 bits (185), Expect = 1e-14
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +1
Query: 211 RWVTWHESCEETTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGGFAGTLELLTISL 378
RW++WH + VLNVD SCLG+PGRAGFGGL R G G W+ GF+G L + I+L
Sbjct: 65 RWISWHSCKTDCVVLNVDGSCLGDPGRAGFGGLFRKGDGEWIRGFSGYLGVTNITL 120
>GAU20193.1 hypothetical protein TSUD_352570 [Trifolium subterraneum]
Length = 171
Score = 70.1 bits (170), Expect = 2e-12
Identities = 31/51 (60%), Positives = 37/51 (72%)
Frame = +1
Query: 211 RWVTWHESCEETTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGGFAGTLEL 363
RW++WH S +E VLNVD SCLG GR GFGGL+R G G W+ GF+G L L
Sbjct: 2 RWISWHPSRQEGYVLNVDGSCLGASGRTGFGGLIRMGDGSWIVGFSGYLGL 52
>GAU22350.1 hypothetical protein TSUD_106780 [Trifolium subterraneum]
Length = 1200
Score = 54.3 bits (129), Expect(2) = 2e-10
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +1
Query: 196 DTGSPRWVTWHESCEETTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGGFAGTLELLTI 372
+ + ++V W+ +LNVD S +GNPG +GFGGL+R+ G W+ GF G L + I
Sbjct: 1082 EISTTKFVKWNALGGTGLILNVDGSSIGNPGISGFGGLIRNADGAWIHGFFGNLGVTNI 1140
Score = 38.5 bits (88), Expect(2) = 2e-10
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +3
Query: 15 AWIRLGAEGPNPYLFFAGLWSAWLKRNAESIAMDIVNLFNSVWEACGLAATLFNSY 182
AW+ G P LF AG+W W RNA + ++V+ ++ A L N Y
Sbjct: 1022 AWLHNGLNSPTMMLFIAGIWWIWRARNAMCLDSEMVSFWSQKLRIMDYALLLKNCY 1077
>GAU49954.1 hypothetical protein TSUD_180180 [Trifolium subterraneum]
Length = 968
Score = 58.2 bits (139), Expect(2) = 2e-10
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +1
Query: 211 RWVTWHESCEETTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGGFAGTLE 360
R++ W + T+LNVD SCLG+P RAGFGG++R+ G +L GF+G ++
Sbjct: 799 RFIKWKNNNFSCTILNVDGSCLGSPARAGFGGIIRNTFGYYLAGFSGYIQ 848
Score = 34.7 bits (78), Expect(2) = 2e-10
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 18 WIRLGAEGPNPYLFFAGLWSAWLKRNAESIAMDIVNLFNSVW 143
W+++GA G +F AG+W +W RN +++L N W
Sbjct: 734 WLKMGATGTQSLIFSAGVWWSWRHRN-------LMSLNNETW 768
>GAU17063.1 hypothetical protein TSUD_105620 [Trifolium subterraneum]
Length = 440
Score = 52.8 bits (125), Expect(2) = 2e-10
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = +1
Query: 193 KDTGSPRWVTWHESCEETTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGGFAGTL 357
K T + R V W+ +LNVD S +GNP GFGGL+R+ G W+ GFAG +
Sbjct: 266 KSTLANRLVRWNAHDGTDMILNVDGSSIGNPEIYGFGGLIRNSHGAWIRGFAGNI 320
Score = 40.0 bits (92), Expect(2) = 2e-10
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 6 NSKAWIRLGAEGPNPYLFFAGLWSAWLKRNAESIAMDIVNLF 131
N AW+R G + P+ ++F A LW W RN +A ++V+ F
Sbjct: 204 NLYAWLRKGCDSPSMFMFLAALWWIWRARNKLCLANELVSPF 245
>ABE80156.1 Ribonuclease H [Medicago truncatula]
Length = 438
Score = 55.5 bits (132), Expect(2) = 2e-10
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +1
Query: 205 SPRWVTWHESCEETTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGGFAG 351
S R+V W+ +LNVD SCLG P R G+GG+LR+ G ++ GF+G
Sbjct: 267 SDRFVKWNNRNHHDHILNVDGSCLGTPSRTGYGGILRNSAGLFISGFSG 315
Score = 37.4 bits (85), Expect(2) = 2e-10
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 18 WIRLGAEGPNPYLFFAGLWSAWLKRNAESIAMDIVNLF---NSVWEACGLAATLFNS 179
W ++G P +FF GLW AW RN + + ++LF N++ A + F+S
Sbjct: 204 WFKIGMSSSLPDIFFGGLWWAWRHRNLMCLNNETMSLFRLCNNIVSAATYIKSAFDS 260
>ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 869
Score = 60.8 bits (146), Expect(2) = 3e-10
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +1
Query: 205 SPRWVTWHESCEETTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGGFAGTL 357
S R+V W+ S T+LNVD SC+G+P RAGFGGL+R+ G +L GF G L
Sbjct: 698 SDRYVKWNNSNFNCTILNVDGSCIGSPIRAGFGGLIRNSVGFYLSGFLGFL 748
Score = 31.2 bits (69), Expect(2) = 3e-10
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 18 WIRLGAEGPNPYLFFAGLWSAWLKRNAESIA 110
W + G G LF AGLW W RNA ++
Sbjct: 635 WCKSGLIGSKAILFAAGLWWIWRSRNARCMS 665
>GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum]
Length = 724
Score = 56.6 bits (135), Expect(2) = 6e-10
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +1
Query: 199 TGSPRWVTWHESCEETTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGGFAGTLELLTI 372
T P+ V W+ + +LNVD S +GNPG +GFGGL+R+ G W+ GF G L + I
Sbjct: 552 TTLPKIVRWNALGGTSMILNVDGSTIGNPGISGFGGLIRNADGAWIHGFFGNLGVTNI 609
Score = 34.3 bits (77), Expect(2) = 6e-10
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +3
Query: 6 NSKAWIRLGAEGPNPYLFFAGLWSAWLKRNAESIAMDIVNLFNSVWEACGLAATLFNSYH 185
+S +W+R G + +LF A +W W RNA + +++ F+ A L N +
Sbjct: 488 DSSSWLRNGLSCSSMFLFMAAIWWIWRTRNALCLDNELIPQFSLKMRIVDYALLLKNCHF 547
Query: 186 AQQ 194
Q
Sbjct: 548 NHQ 550
>GAU11845.1 hypothetical protein TSUD_75960 [Trifolium subterraneum]
Length = 386
Score = 55.8 bits (133), Expect(2) = 1e-09
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +1
Query: 199 TGSPRWVTWHESCEETTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGGFAGTLELLTI 372
T P+ V W+ + +LNVDRS +GNPG +GFGGL+ + G W+ GF G L + I
Sbjct: 268 TTLPKIVRWNALGGTSMILNVDRSSIGNPGISGFGGLICNAYGAWIHGFFGNLGVTNI 325
Score = 34.3 bits (77), Expect(2) = 1e-09
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 6 NSKAWIRLGAEGPNPYLFFAGLWSAWLKRNAESIAMDIVNLFNSVWEACGLAATLFNSYH 185
+S +W+R G + +LF A +W W RNA + ++V F+ A L N +
Sbjct: 204 DSSSWLRNGLSCSSMFLFMAAIWWIWRTRNALCLDNELVPQFSLKMRIVDYALLLKNCHF 263
Query: 186 AQQ 194
Q
Sbjct: 264 NYQ 266
>ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1296
Score = 57.8 bits (138), Expect(2) = 2e-09
Identities = 27/60 (45%), Positives = 38/60 (63%)
Frame = +1
Query: 205 SPRWVTWHESCEETTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGGFAGTLELLTISLLS 384
S R V W++ + +LNVD SCLG P RAGFGG+ R+ G +L G++G + T LL+
Sbjct: 1125 SARMVKWNQGNHQCHILNVDGSCLGTPIRAGFGGIFRNNVGGYLSGYSGFISESTDILLA 1184
Score = 31.2 bits (69), Expect(2) = 2e-09
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +3
Query: 18 WIRLGAEGPNPYLFFAGLWSAWLKRNAESIAMDIVNLFNSVWEACGLAATLFNSYHA 188
WIR + G F AGLW +W RN ++ L N W ++ + +S +A
Sbjct: 1061 WIRNFSSGSRAITFLAGLWWSWRHRN-------LMCLSNETWPLTRISFRINDSINA 1110
>GAU41508.1 hypothetical protein TSUD_302460 [Trifolium subterraneum]
Length = 1075
Score = 55.1 bits (131), Expect(2) = 3e-09
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +1
Query: 190 SKDTGSPRWVTWHESCEETTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGGFAG 351
S T R + W+ +LNVD SCLG+P RAG+GG++R+ +G +L GF+G
Sbjct: 899 SDGTSVSRLIKWNNDNFSCVILNVDGSCLGSPVRAGYGGIIRNDSGFYLSGFSG 952
Score = 33.5 bits (75), Expect(2) = 3e-09
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 6 NSKAWIRLGAEGPNPYLFFAGLWSAWLKRN 95
+++ W+++G+ G Y F A +W AW RN
Sbjct: 837 DAREWLKVGSTGSQAYTFSASVWWAWRHRN 866
>GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterraneum]
Length = 545
Score = 53.9 bits (128), Expect(2) = 3e-09
Identities = 25/52 (48%), Positives = 33/52 (63%)
Frame = +1
Query: 217 VTWHESCEETTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGGFAGTLELLTI 372
V W+ +LNVD S +GNPG +GFGGL+R+ G W+ GFAG + L I
Sbjct: 379 VRWNAHGGIGMILNVDGSSIGNPGISGFGGLIRNSDGAWVHGFAGNIGHLNI 430
Score = 34.7 bits (78), Expect(2) = 3e-09
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 6 NSKAWIRLGAEGPNPYLFFAGLWSAWLKRNAESIAMDIVNLF 131
N W+R +GP+ +LF A +W W RN + + ++ F
Sbjct: 309 NLNDWLRNSIDGPSSFLFMAAVWWIWCARNQLCMDNEAISYF 350
>GAU16251.1 hypothetical protein TSUD_298830 [Trifolium subterraneum]
Length = 152
Score = 61.2 bits (147), Expect = 3e-09
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +1
Query: 181 TMLSKDTGSP--RWVTWHESCEETTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGGFAGT 354
T K SP R V W+ +LNVD S +GNPG +GFGGLLR+ G W+ GFAG
Sbjct: 12 TCFIKQNLSPTTRMVRWNAQGGNGMILNVDGSSIGNPGVSGFGGLLRNSDGGWIHGFAGN 71
Query: 355 LELLTISLLSWW 390
+ + I + +W
Sbjct: 72 IGISNILHVEYW 83
>ABD32401.2 Ribonuclease H, partial [Medicago truncatula]
Length = 233
Score = 53.5 bits (127), Expect(2) = 4e-09
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +1
Query: 205 SPRWVTWHESCEETTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGGFAGTL 357
S R V W+ + +LNVD SC+G P R G+GG+LR+ G ++ GF+G +
Sbjct: 62 SDRLVKWNNRNHQDFILNVDGSCIGTPPRTGYGGVLRNSAGLFISGFSGLI 112
Score = 34.7 bits (78), Expect(2) = 4e-09
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +3
Query: 24 RLGAEGPNPYLFFAGLWSAWLKRNAESIAMDIVNLF---NSVWEACGLAATLFN 176
+LG G +F AGLW W RN + + ++LF N++ A A + FN
Sbjct: 1 KLGISGSRSSIFLAGLWWVWRHRNLMCLNNETLSLFRLCNNIISAADAANSAFN 54
>GAU26057.1 hypothetical protein TSUD_225190 [Trifolium subterraneum]
Length = 536
Score = 57.4 bits (137), Expect(2) = 1e-08
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +1
Query: 196 DTGSPRWVTWHESCEETTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGGFAGTL 357
DT + + V W+ + +LNVD S LGNPG +GFGGL+R+ G W+ GF G L
Sbjct: 418 DTSTSKLVKWNVLGGTSMILNVDGSSLGNPGISGFGGLIRNADGAWVHGFFGNL 471
Score = 29.3 bits (64), Expect(2) = 1e-08
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 18 WIRLGAEGPNPYLFFAGLWSAWLKRNAESIAMDIVNLFN 134
WIR G + +LF A +W W RNA + D + ++
Sbjct: 359 WIRNGLRCFSMFLFMATIWWIWRTRNALCLNSDPIPFYS 397
>XP_013453903.1 hypothetical protein MTR_5g049720 [Medicago truncatula] KEH27934.1
hypothetical protein MTR_5g049720 [Medicago truncatula]
Length = 283
Score = 50.8 bits (120), Expect(2) = 1e-08
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +1
Query: 211 RWVTWHESCEETTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGG 342
R + W+ + + +LNVD SC+G P RAGFGGL+R+ +G +L G
Sbjct: 94 RHIRWNNNNFDGDILNVDGSCIGTPSRAGFGGLIRNTSGYYLAG 137
Score = 35.4 bits (80), Expect(2) = 1e-08
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Frame = +3
Query: 6 NSKAWIRLGAEGPNPYLFFAGLWSAWLKRNAESIAMD-------IVNLFNSV 140
N W++ G GP F +GLW W RN SI+ + VN+ NSV
Sbjct: 26 NVVEWLKKGTTGPQAAFFASGLWWVWRCRNVMSISNEQMTIHRVAVNIQNSV 77
>GAU40444.1 hypothetical protein TSUD_397630 [Trifolium subterraneum]
Length = 275
Score = 52.4 bits (124), Expect(2) = 1e-08
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +1
Query: 190 SKDTGSPRWVTWHESCEETTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGGFAG 351
S T R + W+ +LNVD SCL +P RAG+GG++R+ +G +L GF+G
Sbjct: 99 SDGTAVSRLIKWNNDNFSCVILNVDGSCLDSPVRAGYGGIIRNDSGFYLSGFSG 152
Score = 33.9 bits (76), Expect(2) = 1e-08
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 6 NSKAWIRLGAEGPNPYLFFAGLWSAWLKRN 95
+++ W ++G+ G Y F AG+W AW RN
Sbjct: 37 DAREWRKVGSTGSQAYTFSAGVWWAWRHRN 66
>ABD33150.1 Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 104
Score = 58.2 bits (139), Expect = 2e-08
Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +1
Query: 199 TGSPRWVTWHESCEE-TTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGGFAGTLELLTIS 375
T S R V W+ S +LNVD SCLG P RAGFGGL+R+ G +L F+G L LT
Sbjct: 19 TYSERMVRWNSSNNHHCDILNVDGSCLGTPTRAGFGGLIRNNAGFFLSSFSGFLSDLTCI 78
Query: 376 LLS 384
LL+
Sbjct: 79 LLA 81
>GAU50029.1 hypothetical protein TSUD_240220 [Trifolium subterraneum]
Length = 357
Score = 55.5 bits (132), Expect(2) = 2e-08
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = +1
Query: 196 DTGSPRWVTWHESCEETTVLNVDRSCLGNPGRAGFGGLLRDGTGRWLGGFAGTLELLTI 372
+T + R V W+ +LNVD S +GNPG +GFGGL+R+ G W+ GF G L + I
Sbjct: 243 ETPTTRLVKWNVLGGTGMILNVDGSIIGNPGISGFGGLIRNADGAWVHGFFGNLAVTNI 301
Score = 30.0 bits (66), Expect(2) = 2e-08
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = +3
Query: 18 WIRLGAEGPNPYLFFAGLWSAWLKRNAESIAMDIVNLFNSVWEACGLAATLFNSY 182
W+R LF AG+W W RNA + ++++ + A L N Y
Sbjct: 184 WLRYDLSSSALLLFIAGIWWIWRARNALCLDSEMISFCSLKLHIMDYALLLKNCY 238