BLASTX nr result
ID: Glycyrrhiza33_contig00020089
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza33_contig00020089
(320 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KTT92375.1 replication protein C, partial [Staphylococcus sciuri] 122 2e-32
WP_006023642.1 MULTISPECIES: hypothetical protein [Afipia] EKS32... 106 4e-25
WP_051443753.1 replication protein C [Afipia sp. P52-10] ETR7945... 105 9e-25
WP_048758169.1 replication protein C [Afipia felis] 103 4e-24
CEG10456.1 replication initiation protein RepC [Afipia felis] 103 4e-24
WP_011505043.1 replication protein C [Nitrobacter hamburgensis] ... 103 1e-23
WP_040308457.1 MULTISPECIES: replication protein C [Bradyrhizobi... 102 2e-23
EKS26847.1 hypothetical protein HMPREF9697_03963 [Afipia felis A... 102 2e-23
WP_063830211.1 replication protein C [Bradyrhizobium sp. OHSU_III] 100 1e-22
WP_041358589.1 replication protein C [Methylobacterium extorquens] 98 7e-22
CAX24236.1 RepC-like protein [Methylobacterium extorquens DM4] 98 7e-22
WP_061979913.1 MULTISPECIES: replication protein C [Bradyrhizobium] 97 1e-21
WP_013913430.1 replication protein C [Oligotropha carboxidovoran... 96 3e-21
ACI94741.1 replication protein C [Oligotropha carboxidovorans OM5] 96 4e-21
SCB50338.1 replication initiation protein RepC [Rhizobium multih... 94 1e-20
WP_040427757.1 MULTISPECIES: hypothetical protein [Bradyrhizobia... 94 1e-20
ODT74398.1 replication initiation protein RepC [Pelagibacterium ... 89 1e-18
SHF79796.1 Replication protein C C-terminal region, partial [Dev... 85 2e-18
WP_046170487.1 replication initiation protein RepC [Devosia psyc... 87 5e-18
WP_072608371.1 replication initiation protein RepC [Mesorhizobiu... 87 7e-18
>KTT92375.1 replication protein C, partial [Staphylococcus sciuri]
Length = 226
Score = 122 bits (305), Expect = 2e-32
Identities = 59/60 (98%), Positives = 59/60 (98%)
Frame = -2
Query: 319 PSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTT 140
PSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMAL T
Sbjct: 167 PSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALAT 226
>WP_006023642.1 MULTISPECIES: hypothetical protein [Afipia] EKS32924.1 hypothetical
protein HMPREF9695_04939 [Afipia broomeae ATCC 49717]
Length = 410
Score = 106 bits (265), Expect = 4e-25
Identities = 51/79 (64%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = -2
Query: 319 PSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTT 140
PSAWE+AC MG+G AS TLA ILQ+G+ IKNPGGYLRTL RRA+AGQFSIWPMLMAL
Sbjct: 328 PSAWEEACAAMGQGPASVTLALILQRGNGIKNPGGYLRTLARRAAAGQFSIWPMLMALRG 387
Query: 139 SHLRRQDKDARAPSG-SFP 86
+ + + + P+G SFP
Sbjct: 388 AQRGKDPAEMKTPAGPSFP 406
>WP_051443753.1 replication protein C [Afipia sp. P52-10] ETR79455.1 replication
protein C [Afipia sp. P52-10]
Length = 403
Score = 105 bits (262), Expect = 9e-25
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = -2
Query: 319 PSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTT 140
PSAWE+ C MG G AS TLA ILQ+G AI+NPGGYLRTL RRASAGQFS+WPMLMAL
Sbjct: 322 PSAWEETCVAMGPGLASVTLALILQRGSAIRNPGGYLRTLARRASAGQFSVWPMLMALGA 381
Query: 139 SHLRRQDKDARAPSGSFP 86
+ ++ + P+ SFP
Sbjct: 382 TQRQKSEAARTPPTPSFP 399
>WP_048758169.1 replication protein C [Afipia felis]
Length = 410
Score = 103 bits (258), Expect = 4e-24
Identities = 53/77 (68%), Positives = 60/77 (77%)
Frame = -2
Query: 316 SAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTTS 137
SAWE+ACT MG+GQAS LAAILQ+G AIKNPGGYLR L RRA+AG+FS+WPMLMAL
Sbjct: 332 SAWEEACTAMGDGQASVVLAAILQRGAAIKNPGGYLRNLARRAAAGKFSVWPMLMALRRQ 391
Query: 136 HLRRQDKDARAPSGSFP 86
D+D R PS SFP
Sbjct: 392 GCADNDRD-RLPS-SFP 406
>CEG10456.1 replication initiation protein RepC [Afipia felis]
Length = 412
Score = 103 bits (258), Expect = 4e-24
Identities = 53/77 (68%), Positives = 60/77 (77%)
Frame = -2
Query: 316 SAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTTS 137
SAWE+ACT MG+GQAS LAAILQ+G AIKNPGGYLR L RRA+AG+FS+WPMLMAL
Sbjct: 334 SAWEEACTAMGDGQASVVLAAILQRGAAIKNPGGYLRNLARRAAAGKFSVWPMLMALRRQ 393
Query: 136 HLRRQDKDARAPSGSFP 86
D+D R PS SFP
Sbjct: 394 GCADNDRD-RLPS-SFP 408
>WP_011505043.1 replication protein C [Nitrobacter hamburgensis] ABE65103.1
replication protein C (plasmid) [Nitrobacter
hamburgensis X14]
Length = 541
Score = 103 bits (257), Expect = 1e-23
Identities = 52/78 (66%), Positives = 61/78 (78%)
Frame = -2
Query: 319 PSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTT 140
PSAWE+ACT MG+GQAS LAAILQ+G AIK+PGGYLR L RRA+AG+FS+WPMLMAL
Sbjct: 460 PSAWEEACTAMGDGQASVVLAAILQRGAAIKSPGGYLRVLARRAAAGEFSVWPMLMALRR 519
Query: 139 SHLRRQDKDARAPSGSFP 86
+D+D PS SFP
Sbjct: 520 QGRAARDRDC-LPS-SFP 535
>WP_040308457.1 MULTISPECIES: replication protein C [Bradyrhizobiaceae] KIZ48201.1
replication protein C [Rhodopseudomonas palustris]
KQW18215.1 replication protein C [Afipia sp. Root123D2]
Length = 410
Score = 102 bits (253), Expect = 2e-23
Identities = 50/78 (64%), Positives = 60/78 (76%)
Frame = -2
Query: 319 PSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTT 140
PSAWE+A MG+GQAS L+AILQ+G+AIKNPGGYLR L RRA+AG+FS+WPMLMAL
Sbjct: 331 PSAWEEARIAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWPMLMALRR 390
Query: 139 SHLRRQDKDARAPSGSFP 86
+D+D PS SFP
Sbjct: 391 QGQAARDRD--PPSSSFP 406
>EKS26847.1 hypothetical protein HMPREF9697_03963 [Afipia felis ATCC 53690]
Length = 412
Score = 102 bits (253), Expect = 2e-23
Identities = 50/78 (64%), Positives = 60/78 (76%)
Frame = -2
Query: 319 PSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTT 140
PSAWE+A MG+GQAS L+AILQ+G+AIKNPGGYLR L RRA+AG+FS+WPMLMAL
Sbjct: 333 PSAWEEARIAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWPMLMALRR 392
Query: 139 SHLRRQDKDARAPSGSFP 86
+D+D PS SFP
Sbjct: 393 QGQAARDRD--PPSSSFP 408
>WP_063830211.1 replication protein C [Bradyrhizobium sp. OHSU_III]
Length = 412
Score = 99.8 bits (247), Expect = 1e-22
Identities = 52/81 (64%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
Frame = -2
Query: 319 PSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTT 140
PSAWE+A MG+GQAS L+AILQ+G+AIKNPGGYLR L RRA+AG+FS+WPMLMA
Sbjct: 333 PSAWEEARVAMGDGQASVVLSAILQRGNAIKNPGGYLRILARRAAAGKFSVWPMLMA--- 389
Query: 139 SHLRRQDKDAR---APSGSFP 86
LRRQ + AR P SFP
Sbjct: 390 --LRRQGQAARDREPPPSSFP 408
>WP_041358589.1 replication protein C [Methylobacterium extorquens]
Length = 412
Score = 97.8 bits (242), Expect = 7e-22
Identities = 49/78 (62%), Positives = 59/78 (75%)
Frame = -2
Query: 319 PSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTT 140
PSAWE+A MG+GQAS L+AILQ+G+AIK+PGGYLR L RRA+AG+FS+WPMLMAL
Sbjct: 331 PSAWEEARVAMGDGQASVVLSAILQRGNAIKSPGGYLRILARRAAAGKFSVWPMLMALRR 390
Query: 139 SHLRRQDKDARAPSGSFP 86
+DKD P SFP
Sbjct: 391 QGPGARDKD--PPPYSFP 406
>CAX24236.1 RepC-like protein [Methylobacterium extorquens DM4]
Length = 414
Score = 97.8 bits (242), Expect = 7e-22
Identities = 49/78 (62%), Positives = 59/78 (75%)
Frame = -2
Query: 319 PSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTT 140
PSAWE+A MG+GQAS L+AILQ+G+AIK+PGGYLR L RRA+AG+FS+WPMLMAL
Sbjct: 333 PSAWEEARVAMGDGQASVVLSAILQRGNAIKSPGGYLRILARRAAAGKFSVWPMLMALRR 392
Query: 139 SHLRRQDKDARAPSGSFP 86
+DKD P SFP
Sbjct: 393 QGPGARDKD--PPPYSFP 408
>WP_061979913.1 MULTISPECIES: replication protein C [Bradyrhizobium]
Length = 399
Score = 97.1 bits (240), Expect = 1e-21
Identities = 46/65 (70%), Positives = 56/65 (86%)
Frame = -2
Query: 319 PSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTT 140
PSAWE+A VMGE QAS +AAILQ+G AIKNPGGYLR LTRRA+AG+FSIWPML+AL+
Sbjct: 333 PSAWEEAGQVMGEMQASIVVAAILQRGVAIKNPGGYLRNLTRRAAAGEFSIWPMLLALSA 392
Query: 139 SHLRR 125
+ L++
Sbjct: 393 TRLKK 397
>WP_013913430.1 replication protein C [Oligotropha carboxidovorans] AEI04578.1
replication protein C (plasmid) [Oligotropha
carboxidovorans OM4] AEI08207.1 replication protein C
(plasmid) [Oligotropha carboxidovorans OM5]
Length = 410
Score = 96.3 bits (238), Expect = 3e-21
Identities = 47/71 (66%), Positives = 55/71 (77%)
Frame = -2
Query: 319 PSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTT 140
PSAWE+AC MG+GQAS LAAILQ+G AIK+PGGYLR L RRA+ G+FS+WPML+A
Sbjct: 331 PSAWEEACNAMGDGQASVVLAAILQRGAAIKSPGGYLRILARRATTGEFSVWPMLLA--- 387
Query: 139 SHLRRQDKDAR 107
LRRQ AR
Sbjct: 388 --LRRQGHAAR 396
>ACI94741.1 replication protein C [Oligotropha carboxidovorans OM5]
Length = 484
Score = 96.3 bits (238), Expect = 4e-21
Identities = 47/71 (66%), Positives = 55/71 (77%)
Frame = -2
Query: 319 PSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTT 140
PSAWE+AC MG+GQAS LAAILQ+G AIK+PGGYLR L RRA+ G+FS+WPML+A
Sbjct: 405 PSAWEEACNAMGDGQASVVLAAILQRGAAIKSPGGYLRILARRATTGEFSVWPMLLA--- 461
Query: 139 SHLRRQDKDAR 107
LRRQ AR
Sbjct: 462 --LRRQGHAAR 470
>SCB50338.1 replication initiation protein RepC [Rhizobium multihospitium]
Length = 394
Score = 94.4 bits (233), Expect = 1e-20
Identities = 44/64 (68%), Positives = 54/64 (84%)
Frame = -2
Query: 316 SAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTTS 137
SAWE+A +MGE QA+ +AAILQ+G AIKNPGGYLR LTRRA AGQFS+WPMLMAL+ +
Sbjct: 329 SAWEEAGQIMGEPQAAIIVAAILQRGVAIKNPGGYLRNLTRRAGAGQFSVWPMLMALSAA 388
Query: 136 HLRR 125
L++
Sbjct: 389 RLKK 392
>WP_040427757.1 MULTISPECIES: hypothetical protein [Bradyrhizobiaceae]
Length = 396
Score = 94.4 bits (233), Expect = 1e-20
Identities = 44/65 (67%), Positives = 54/65 (83%)
Frame = -2
Query: 319 PSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTT 140
PSAWE+A MGE QA+ ++AILQ+G AIKNPGGYLR LTRRA+AGQFS+WPMLMAL+
Sbjct: 329 PSAWEEAGITMGETQAAIVVSAILQRGVAIKNPGGYLRNLTRRAAAGQFSMWPMLMALSA 388
Query: 139 SHLRR 125
L++
Sbjct: 389 GRLKK 393
>ODT74398.1 replication initiation protein RepC [Pelagibacterium sp. SCN 64-44]
Length = 447
Score = 89.0 bits (219), Expect = 1e-18
Identities = 42/63 (66%), Positives = 48/63 (76%)
Frame = -2
Query: 319 PSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTT 140
PSAWEDA MGE QA+ TLAAI QKGD +K+PGGYLR LT RA G+FS WPM+MAL
Sbjct: 338 PSAWEDARVAMGEQQAAITLAAIYQKGDEVKSPGGYLRYLTERAKEGKFSAWPMIMALVR 397
Query: 139 SHL 131
+ L
Sbjct: 398 AEL 400
>SHF79796.1 Replication protein C C-terminal region, partial [Devosia limi DSM
17137]
Length = 184
Score = 85.1 bits (209), Expect = 2e-18
Identities = 41/63 (65%), Positives = 47/63 (74%)
Frame = -2
Query: 319 PSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTT 140
PSAWEDA MGE QA+ TLAAI Q+ D IK+PGGYLR LT RA G+FS WPM+MAL
Sbjct: 75 PSAWEDAKVAMGEQQAAITLAAIYQRTDQIKSPGGYLRNLTERAKEGKFSTWPMIMALLR 134
Query: 139 SHL 131
+ L
Sbjct: 135 AKL 137
>WP_046170487.1 replication initiation protein RepC [Devosia psychrophila]
KKC33535.1 replication initiation protein RepC [Devosia
psychrophila]
Length = 447
Score = 87.4 bits (215), Expect = 5e-18
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = -2
Query: 319 PSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTT 140
PSAWEDA +GE QA+ TLAAI QKGD IK+PGGYLR LT RA +FS+WPM+MAL
Sbjct: 338 PSAWEDARVALGEQQAAITLAAIYQKGDQIKSPGGYLRNLTDRAKEAKFSVWPMIMALVR 397
Query: 139 SHL 131
+ L
Sbjct: 398 AEL 400
>WP_072608371.1 replication initiation protein RepC [Mesorhizobium sp. B7]
APH74915.1 replication initiation protein RepC (plasmid)
[Mesorhizobium sp. B7]
Length = 440
Score = 87.0 bits (214), Expect = 7e-18
Identities = 43/80 (53%), Positives = 53/80 (66%)
Frame = -2
Query: 319 PSAWEDACTVMGEGQASATLAAILQKGDAIKNPGGYLRTLTRRASAGQFSIWPMLMALTT 140
PSAW +AC +GE QA+ TLAAI Q+ D I + GGYLR+LT RA G+FS WPM+MAL
Sbjct: 337 PSAWREACDALGERQAAITLAAIYQRADQINSAGGYLRSLTDRARDGKFSAWPMVMALLR 396
Query: 139 SHLRRQDKDARAPSGSFPSG 80
+ L Q A+ P GS G
Sbjct: 397 AKLDTQKAAAQTPGGSPDDG 416