BLASTX nr result
ID: Glycyrrhiza33_contig00019355
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza33_contig00019355
(350 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SDE91750.1 putative mRNA 3-end processing factor [Bradyrhizobium... 152 1e-42
SFI55591.1 putative mRNA 3-end processing factor [Bradyrhizobium... 150 4e-42
SFV18751.1 putative mRNA 3-end processing factor [Bradyrhizobium... 150 7e-42
EIG60754.1 putative exonuclease of the beta-lactamase fold invol... 149 1e-41
WP_024581785.1 MULTISPECIES: DNA ligase-associated DEXH box heli... 148 3e-41
WP_076832397.1 DNA ligase-associated DEXH box helicase [Bradyrhi... 148 3e-41
SFK11772.1 putative mRNA 3-end processing factor [Bradyrhizobium... 148 4e-41
SDH27692.1 putative mRNA 3-end processing factor [Bradyrhizobium... 147 8e-41
SEO14076.1 putative mRNA 3-end processing factor [Bradyrhizobium... 147 1e-40
WP_076864230.1 DNA ligase-associated DEXH box helicase [Bradyrhi... 146 1e-40
WP_057016051.1 DNA ligase-associated DEXH box helicase [Bradyrhi... 146 1e-40
WP_029077850.1 DNA ligase-associated DEXH box helicase [Bradyrhi... 146 1e-40
WP_050382686.1 DNA ligase-associated DEXH box helicase [Bradyrhi... 146 1e-40
WP_069280315.1 DNA ligase-associated DEXH box helicase [Bradyrhi... 146 1e-40
WP_038384489.1 DNA ligase-associated DEXH box helicase [Bradyrhi... 146 1e-40
WP_028339019.1 DNA ligase-associated DEXH box helicase [Bradyrhi... 146 1e-40
WP_016844847.1 DNA ligase-associated DEXH box helicase [Bradyrhi... 146 1e-40
WP_050632009.1 DNA ligase-associated DEXH box helicase [Bradyrhi... 145 3e-40
WP_074129867.1 DNA ligase-associated DEXH box helicase [Bradyrhi... 145 5e-40
WP_028334597.1 DNA ligase-associated DEXH box helicase [Bradyrhi... 145 6e-40
>SDE91750.1 putative mRNA 3-end processing factor [Bradyrhizobium sp. R5]
Length = 374
Score = 152 bits (384), Expect = 1e-42
Identities = 71/81 (87%), Positives = 75/81 (92%)
Frame = -3
Query: 246 RYRGINAYISGMRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHAPVGHGAV 67
++R +AYI MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHA GHGAV
Sbjct: 12 KHRRSSAYIGTMRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHARAGHGAV 71
Query: 66 LATRETLDMMRLRYGENFAGS 4
LAT+ETLDMMRLRYGENFAGS
Sbjct: 72 LATQETLDMMRLRYGENFAGS 92
>SFI55591.1 putative mRNA 3-end processing factor [Bradyrhizobium sp. cf659]
Length = 366
Score = 150 bits (380), Expect = 4e-42
Identities = 71/90 (78%), Positives = 77/90 (85%)
Frame = -3
Query: 273 RGSSPLLTIRYRGINAYISGMRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSD 94
RGSSP +T + AY+ MRPQDIL+P AGLCCKPGGFHIDPVRPVERA+ITHGHSD
Sbjct: 2 RGSSPRMTGEFGASAAYMPTMRPQDILLPAAAGLCCKPGGFHIDPVRPVERAVITHGHSD 61
Query: 93 HAPVGHGAVLATRETLDMMRLRYGENFAGS 4
HA GHGAVLAT+ETLDMMRLRYGENFAGS
Sbjct: 62 HARAGHGAVLATQETLDMMRLRYGENFAGS 91
>SFV18751.1 putative mRNA 3-end processing factor [Bradyrhizobium arachidis]
Length = 359
Score = 150 bits (378), Expect = 7e-42
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = -3
Query: 255 LTIRYRGINAYISGMRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHAPVGH 76
+T YRG AY++ MRPQDIL+P AGLCCKPGGFHIDPVRPVERA+ITHGHSDHA GH
Sbjct: 1 MTGEYRGTAAYMTSMRPQDILLPAAAGLCCKPGGFHIDPVRPVERAVITHGHSDHARAGH 60
Query: 75 GAVLATRETLDMMRLRYGENFAGS 4
GAVLAT+ETLDMMRLRYGENFAGS
Sbjct: 61 GAVLATQETLDMMRLRYGENFAGS 84
>EIG60754.1 putative exonuclease of the beta-lactamase fold involved in RNA
processing [Bradyrhizobium sp. WSM1253]
Length = 358
Score = 149 bits (376), Expect = 1e-41
Identities = 68/78 (87%), Positives = 73/78 (93%)
Frame = -3
Query: 237 GINAYISGMRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHAPVGHGAVLAT 58
G+ YI+GMRPQDIL+PV AGLCCKPGGFHIDPVRPVERA+ITHGHSDHA GHGAVLAT
Sbjct: 6 GVATYITGMRPQDILLPVAAGLCCKPGGFHIDPVRPVERAVITHGHSDHARAGHGAVLAT 65
Query: 57 RETLDMMRLRYGENFAGS 4
+ETLDMMRLRYGENFAGS
Sbjct: 66 QETLDMMRLRYGENFAGS 83
>WP_024581785.1 MULTISPECIES: DNA ligase-associated DEXH box helicase
[Bradyrhizobium] KIU46934.1 beta-lactamase
[Bradyrhizobium elkanii] OCX29781.1 DNA
ligase-associated DEXH box helicase [Bradyrhizobium sp.
UASWS1016]
Length = 346
Score = 148 bits (373), Expect = 3e-41
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -3
Query: 213 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHAPVGHGAVLATRETLDMMR 34
MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHA GHGAVLATRETLDMMR
Sbjct: 1 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHARAGHGAVLATRETLDMMR 60
Query: 33 LRYGENFAGSV 1
LRYGENFAGSV
Sbjct: 61 LRYGENFAGSV 71
>WP_076832397.1 DNA ligase-associated DEXH box helicase [Bradyrhizobium sp. UFLA
03-321] OMI01996.1 DNA ligase-associated DEXH box
helicase [Bradyrhizobium sp. UFLA 03-321]
Length = 352
Score = 148 bits (373), Expect = 3e-41
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -3
Query: 213 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHAPVGHGAVLATRETLDMMR 34
MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHA GHGAVLATRETLDMMR
Sbjct: 1 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHARAGHGAVLATRETLDMMR 60
Query: 33 LRYGENFAGSV 1
LRYGENFAGSV
Sbjct: 61 LRYGENFAGSV 71
>SFK11772.1 putative mRNA 3-end processing factor [Bradyrhizobium sp. Gha]
Length = 366
Score = 148 bits (373), Expect = 4e-41
Identities = 69/90 (76%), Positives = 77/90 (85%)
Frame = -3
Query: 273 RGSSPLLTIRYRGINAYISGMRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSD 94
RGSSP +T + +Y++ MRPQDIL+P GLCCKPGGFHIDPVRPVERA+ITHGHSD
Sbjct: 2 RGSSPRMTGSFGAPTSYMTEMRPQDILLPTADGLCCKPGGFHIDPVRPVERAVITHGHSD 61
Query: 93 HAPVGHGAVLATRETLDMMRLRYGENFAGS 4
HA GHGAVLAT+ETLDMMRLRYGENFAGS
Sbjct: 62 HARAGHGAVLATQETLDMMRLRYGENFAGS 91
>SDH27692.1 putative mRNA 3-end processing factor [Bradyrhizobium sp. Rc2d]
Length = 359
Score = 147 bits (371), Expect = 8e-41
Identities = 69/84 (82%), Positives = 74/84 (88%)
Frame = -3
Query: 255 LTIRYRGINAYISGMRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHAPVGH 76
+T YR YI+ MRPQDIL+PV AGLCCKPGGFHIDPVRPVERA+ITHGHSDHA GH
Sbjct: 1 MTDEYRITGPYITTMRPQDILLPVAAGLCCKPGGFHIDPVRPVERAVITHGHSDHARAGH 60
Query: 75 GAVLATRETLDMMRLRYGENFAGS 4
GAVLAT+ETLDMMRLRYGENFAGS
Sbjct: 61 GAVLATQETLDMMRLRYGENFAGS 84
>SEO14076.1 putative mRNA 3-end processing factor [Bradyrhizobium sp. OK095]
Length = 359
Score = 147 bits (370), Expect = 1e-40
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = -3
Query: 255 LTIRYRGINAYISGMRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHAPVGH 76
+T R G YI+GMRPQDIL+PV +GLCCKPGGFHIDPVRPVERA+ITHGHSDHA GH
Sbjct: 1 MTTRRCGGATYITGMRPQDILLPVASGLCCKPGGFHIDPVRPVERAVITHGHSDHARPGH 60
Query: 75 GAVLATRETLDMMRLRYGENFAGS 4
GAVLAT+ETLDMMRLRYGENFAGS
Sbjct: 61 GAVLATQETLDMMRLRYGENFAGS 84
>WP_076864230.1 DNA ligase-associated DEXH box helicase [Bradyrhizobium sp. SEMIA
6399]
Length = 352
Score = 146 bits (369), Expect = 1e-40
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = -3
Query: 213 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHAPVGHGAVLATRETLDMMR 34
MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHA GHGAVLAT+ETLDMMR
Sbjct: 1 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHARAGHGAVLATQETLDMMR 60
Query: 33 LRYGENFAGSV 1
LRYGENFAGSV
Sbjct: 61 LRYGENFAGSV 71
>WP_057016051.1 DNA ligase-associated DEXH box helicase [Bradyrhizobium pachyrhizi]
KRQ11008.1 MBL fold metallo-hydrolase [Bradyrhizobium
pachyrhizi]
Length = 352
Score = 146 bits (369), Expect = 1e-40
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = -3
Query: 213 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHAPVGHGAVLATRETLDMMR 34
MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHA GHGAVLAT+ETLDMMR
Sbjct: 1 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHARAGHGAVLATQETLDMMR 60
Query: 33 LRYGENFAGSV 1
LRYGENFAGSV
Sbjct: 61 LRYGENFAGSV 71
>WP_029077850.1 DNA ligase-associated DEXH box helicase [Bradyrhizobium sp. th.b2]
Length = 352
Score = 146 bits (369), Expect = 1e-40
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = -3
Query: 213 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHAPVGHGAVLATRETLDMMR 34
MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHA GHGAVLAT+ETLDMMR
Sbjct: 1 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHARAGHGAVLATQETLDMMR 60
Query: 33 LRYGENFAGSV 1
LRYGENFAGSV
Sbjct: 61 LRYGENFAGSV 71
>WP_050382686.1 DNA ligase-associated DEXH box helicase [Bradyrhizobium pachyrhizi]
Length = 358
Score = 146 bits (369), Expect = 1e-40
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = -3
Query: 213 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHAPVGHGAVLATRETLDMMR 34
MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHA GHGAVLAT+ETLDMMR
Sbjct: 1 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHARAGHGAVLATQETLDMMR 60
Query: 33 LRYGENFAGSV 1
LRYGENFAGSV
Sbjct: 61 LRYGENFAGSV 71
>WP_069280315.1 DNA ligase-associated DEXH box helicase [Bradyrhizobium elkanii]
ODM70768.1 DNA ligase-associated DEXH box helicase
[Bradyrhizobium elkanii] ODM80207.1 DNA
ligase-associated DEXH box helicase [Bradyrhizobium
elkanii]
Length = 359
Score = 146 bits (369), Expect = 1e-40
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = -3
Query: 213 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHAPVGHGAVLATRETLDMMR 34
MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHA GHGAVLAT+ETLDMMR
Sbjct: 1 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHARAGHGAVLATQETLDMMR 60
Query: 33 LRYGENFAGSV 1
LRYGENFAGSV
Sbjct: 61 LRYGENFAGSV 71
>WP_038384489.1 DNA ligase-associated DEXH box helicase [Bradyrhizobium elkanii]
Length = 359
Score = 146 bits (369), Expect = 1e-40
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = -3
Query: 213 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHAPVGHGAVLATRETLDMMR 34
MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHA GHGAVLAT+ETLDMMR
Sbjct: 1 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHARAGHGAVLATQETLDMMR 60
Query: 33 LRYGENFAGSV 1
LRYGENFAGSV
Sbjct: 61 LRYGENFAGSV 71
>WP_028339019.1 DNA ligase-associated DEXH box helicase [Bradyrhizobium elkanii]
Length = 359
Score = 146 bits (369), Expect = 1e-40
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = -3
Query: 213 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHAPVGHGAVLATRETLDMMR 34
MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHA GHGAVLAT+ETLDMMR
Sbjct: 1 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHARAGHGAVLATQETLDMMR 60
Query: 33 LRYGENFAGSV 1
LRYGENFAGSV
Sbjct: 61 LRYGENFAGSV 71
>WP_016844847.1 DNA ligase-associated DEXH box helicase [Bradyrhizobium elkanii]
OIM92680.1 DNA ligase-associated DEXH box helicase
[Bradyrhizobium elkanii]
Length = 359
Score = 146 bits (369), Expect = 1e-40
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = -3
Query: 213 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHAPVGHGAVLATRETLDMMR 34
MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHA GHGAVLAT+ETLDMMR
Sbjct: 1 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHARAGHGAVLATQETLDMMR 60
Query: 33 LRYGENFAGSV 1
LRYGENFAGSV
Sbjct: 61 LRYGENFAGSV 71
>WP_050632009.1 DNA ligase-associated DEXH box helicase [Bradyrhizobium
viridifuturi]
Length = 359
Score = 145 bits (367), Expect = 3e-40
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = -3
Query: 213 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHAPVGHGAVLATRETLDMMR 34
MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHA GHGAVLAT+ETLDMMR
Sbjct: 1 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHARPGHGAVLATQETLDMMR 60
Query: 33 LRYGENFAGSV 1
LRYGENFAGSV
Sbjct: 61 LRYGENFAGSV 71
>WP_074129867.1 DNA ligase-associated DEXH box helicase [Bradyrhizobium sp.
NAS96.2] OKO72302.1 beta-lactamase [Bradyrhizobium sp.
NAS96.2]
Length = 353
Score = 145 bits (365), Expect = 5e-40
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = -3
Query: 213 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHAPVGHGAVLATRETLDMMR 34
MRPQDIL+PVPAGLCCKPGGFHIDPVRPVERALITHGHSDHA GHGAVLAT+ETLDMMR
Sbjct: 1 MRPQDILIPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHARAGHGAVLATQETLDMMR 60
Query: 33 LRYGENFAGSV 1
LRYGENFAGSV
Sbjct: 61 LRYGENFAGSV 71
>WP_028334597.1 DNA ligase-associated DEXH box helicase [Bradyrhizobium elkanii]
Length = 358
Score = 145 bits (365), Expect = 6e-40
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = -3
Query: 213 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHAPVGHGAVLATRETLDMMR 34
MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHA GHGAVLAT+ETLDMMR
Sbjct: 1 MRPQDILMPVPAGLCCKPGGFHIDPVRPVERALITHGHSDHARAGHGAVLATQETLDMMR 60
Query: 33 LRYGENFAGS 4
LRYGENFAGS
Sbjct: 61 LRYGENFAGS 70