BLASTX nr result
ID: Glycyrrhiza33_contig00017533
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza33_contig00017533
(721 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ACD63090.1 RNA polymerase II largest subunit, partial [Pisum sat... 486 e-163
EPS58483.1 hypothetical protein M569_16331, partial [Genlisea au... 474 e-163
ACD63086.1 RNA polymerase II largest subunit, partial [Liriodend... 480 e-161
ACD63084.1 RNA polymerase II largest subunit, partial [Drimys wi... 480 e-161
AAQ08516.1 RNA polymerase II largest subunit, partial [Magnolia ... 480 e-161
EEE68070.1 hypothetical protein OsJ_26086 [Oryza sativa Japonica... 473 e-160
ACD63085.1 RNA polymerase II largest subunit, partial [Illicium ... 479 e-160
ACD63087.1 RNA polymerase II largest subunit, partial [Nicotiana... 479 e-160
ACD63081.1 RNA polymerase II largest subunit, partial [Asparagus... 478 e-160
ACD63083.1 RNA polymerase II largest subunit, partial [Ceratophy... 478 e-160
ACD63091.1 RNA polymerase II largest subunit, partial [Saruma he... 477 e-159
ACD63089.1 RNA polymerase II largest subunit, partial [Persea am... 477 e-159
ACD63082.1 RNA polymerase II largest subunit, partial [Beta vulg... 476 e-159
AAQ08518.1 RNA polymerase II largest subunit, partial [Amborella... 476 e-159
XP_014660874.1 PREDICTED: DNA-directed RNA polymerase II subunit... 472 e-159
AAS79687.1 RNA polymerase II large subunit, partial [Ginkgo biloba] 476 e-159
AAQ08513.1 RNA polymerase II largest subunit, partial [Pinus nigra] 475 e-159
KYP66634.1 DNA-directed RNA polymerase II subunit RPB1 [Cajanus ... 483 e-159
XP_018854550.1 PREDICTED: DNA-directed RNA polymerase II subunit... 453 e-158
XP_015868354.1 PREDICTED: DNA-directed RNA polymerase II subunit... 485 e-158
>ACD63090.1 RNA polymerase II largest subunit, partial [Pisum sativum]
Length = 1010
Score = 486 bits (1252), Expect = e-163
Identities = 238/240 (99%), Positives = 240/240 (100%)
Frame = +1
Query: 1 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD 180
VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD
Sbjct: 175 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD 234
Query: 181 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 360
NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG
Sbjct: 235 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 294
Query: 361 VPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 540
VPW+IALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS
Sbjct: 295 VPWTIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 354
Query: 541 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 720
DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF
Sbjct: 355 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 414
>EPS58483.1 hypothetical protein M569_16331, partial [Genlisea aurea]
Length = 652
Score = 474 bits (1221), Expect = e-163
Identities = 233/240 (97%), Positives = 236/240 (98%)
Frame = +1
Query: 1 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD 180
VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLK+QE NGS AHIISEFAQLLQFHIATYFD
Sbjct: 256 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQEHNGSAAHIISEFAQLLQFHIATYFD 315
Query: 181 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 360
NELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+LG
Sbjct: 316 NELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELG 375
Query: 361 VPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 540
VPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS
Sbjct: 376 VPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 435
Query: 541 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 720
D HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF
Sbjct: 436 DQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 495
>ACD63086.1 RNA polymerase II largest subunit, partial [Liriodendron
tulipifera]
Length = 1010
Score = 480 bits (1236), Expect = e-161
Identities = 234/240 (97%), Positives = 239/240 (99%)
Frame = +1
Query: 1 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD 180
VRPSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIISEFAQLLQFHIATYFD
Sbjct: 175 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATYFD 234
Query: 181 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 360
NELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+LG
Sbjct: 235 NELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELG 294
Query: 361 VPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 540
VPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIR+DGQRLDLRYLKKSS
Sbjct: 295 VPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSS 354
Query: 541 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 720
DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF
Sbjct: 355 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 414
>ACD63084.1 RNA polymerase II largest subunit, partial [Drimys winteri]
Length = 1010
Score = 480 bits (1236), Expect = e-161
Identities = 234/240 (97%), Positives = 239/240 (99%)
Frame = +1
Query: 1 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD 180
VRPSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIISEFAQLLQFHIATYFD
Sbjct: 175 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATYFD 234
Query: 181 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 360
NELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+LG
Sbjct: 235 NELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELG 294
Query: 361 VPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 540
VPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIR+DGQRLDLRYLKKSS
Sbjct: 295 VPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSS 354
Query: 541 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 720
DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF
Sbjct: 355 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 414
>AAQ08516.1 RNA polymerase II largest subunit, partial [Magnolia x soulangeana]
Length = 1010
Score = 480 bits (1236), Expect = e-161
Identities = 234/240 (97%), Positives = 239/240 (99%)
Frame = +1
Query: 1 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD 180
VRPSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIISEFAQLLQFHIATYFD
Sbjct: 175 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATYFD 234
Query: 181 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 360
NELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+LG
Sbjct: 235 NELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELG 294
Query: 361 VPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 540
VPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIR+DGQRLDLRYLKKSS
Sbjct: 295 VPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSS 354
Query: 541 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 720
DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF
Sbjct: 355 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 414
>EEE68070.1 hypothetical protein OsJ_26086 [Oryza sativa Japonica Group]
Length = 804
Score = 473 bits (1217), Expect = e-160
Identities = 230/240 (95%), Positives = 237/240 (98%)
Frame = +1
Query: 1 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD 180
VRPSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHII+EFAQLLQFHIATYFD
Sbjct: 187 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFD 246
Query: 181 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 360
NELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INID+LG
Sbjct: 247 NELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELG 306
Query: 361 VPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 540
VPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIR+DGQRLDLRY+KKSS
Sbjct: 307 VPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKKSS 366
Query: 541 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 720
D HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF
Sbjct: 367 DQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 426
>ACD63085.1 RNA polymerase II largest subunit, partial [Illicium parviflorum]
Length = 1013
Score = 479 bits (1233), Expect = e-160
Identities = 233/240 (97%), Positives = 239/240 (99%)
Frame = +1
Query: 1 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD 180
VRPSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIISEFAQLLQFHIATYFD
Sbjct: 178 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATYFD 237
Query: 181 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 360
NELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+LG
Sbjct: 238 NELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELG 297
Query: 361 VPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 540
VPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIR+DGQRLDLRYLKKSS
Sbjct: 298 VPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSS 357
Query: 541 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 720
DHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF
Sbjct: 358 DHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 417
>ACD63087.1 RNA polymerase II largest subunit, partial [Nicotiana tabacum]
Length = 1010
Score = 479 bits (1232), Expect = e-160
Identities = 234/240 (97%), Positives = 238/240 (99%)
Frame = +1
Query: 1 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD 180
VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNG+PAHIISEFAQLLQFHIATYFD
Sbjct: 175 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIATYFD 234
Query: 181 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 360
N+LPG PRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG
Sbjct: 235 NDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 294
Query: 361 VPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 540
VPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS
Sbjct: 295 VPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 354
Query: 541 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 720
D HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF
Sbjct: 355 DQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 414
>ACD63081.1 RNA polymerase II largest subunit, partial [Asparagus officinalis]
Length = 1009
Score = 478 bits (1230), Expect = e-160
Identities = 232/240 (96%), Positives = 239/240 (99%)
Frame = +1
Query: 1 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD 180
VRPSVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNG+PAHII+EFAQLLQFHIATYFD
Sbjct: 176 VRPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFD 235
Query: 181 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 360
NELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+LG
Sbjct: 236 NELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELG 295
Query: 361 VPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 540
VPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIR+DGQRLDLRYLKKSS
Sbjct: 296 VPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSS 355
Query: 541 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 720
DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF
Sbjct: 356 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 415
>ACD63083.1 RNA polymerase II largest subunit, partial [Ceratophyllum demersum]
Length = 1010
Score = 478 bits (1229), Expect = e-160
Identities = 233/240 (97%), Positives = 238/240 (99%)
Frame = +1
Query: 1 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD 180
VRPSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIISEFAQLLQFHIATYFD
Sbjct: 175 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATYFD 234
Query: 181 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 360
NELP PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+LG
Sbjct: 235 NELPXQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELG 294
Query: 361 VPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 540
VPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIR+DGQRLDLRYLKKSS
Sbjct: 295 VPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSS 354
Query: 541 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 720
DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF
Sbjct: 355 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 414
>ACD63091.1 RNA polymerase II largest subunit, partial [Saruma henryi]
Length = 1009
Score = 477 bits (1227), Expect = e-159
Identities = 231/240 (96%), Positives = 239/240 (99%)
Frame = +1
Query: 1 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD 180
VRPSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQE+NG+PAHIISEFAQLLQFHIATYFD
Sbjct: 174 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQEKNGAPAHIISEFAQLLQFHIATYFD 233
Query: 181 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 360
NELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+LG
Sbjct: 234 NELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELG 293
Query: 361 VPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 540
VPWSIALNLTYPETVTPYNI+RLKELVE+GPHPPPGKTGAKYIIR+DGQRLDLRYLKKSS
Sbjct: 294 VPWSIALNLTYPETVTPYNIDRLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSS 353
Query: 541 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 720
DHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF
Sbjct: 354 DHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 413
>ACD63089.1 RNA polymerase II largest subunit, partial [Persea americana]
Length = 1009
Score = 477 bits (1227), Expect = e-159
Identities = 232/240 (96%), Positives = 238/240 (99%)
Frame = +1
Query: 1 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD 180
VRPSVMMDTSSRSEDDLTHQLAMIIRHNENL++QERNG+PAHIISEFAQLLQFHIATYFD
Sbjct: 174 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRKQERNGAPAHIISEFAQLLQFHIATYFD 233
Query: 181 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 360
NELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+LG
Sbjct: 234 NELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELG 293
Query: 361 VPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 540
VPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIR+DGQRLDLRY KKSS
Sbjct: 294 VPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYSKKSS 353
Query: 541 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 720
DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF
Sbjct: 354 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 413
>ACD63082.1 RNA polymerase II largest subunit, partial [Beta vulgaris]
Length = 1012
Score = 476 bits (1226), Expect = e-159
Identities = 231/240 (96%), Positives = 238/240 (99%)
Frame = +1
Query: 1 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD 180
VRPSVMMDTSSRSEDDLTHQLAMIIRHN+NL+RQERNG+PAHIISEFAQLLQFHIATYFD
Sbjct: 177 VRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGAPAHIISEFAQLLQFHIATYFD 236
Query: 181 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 360
NELPG PRATQRSGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSARTVITPDP INID+LG
Sbjct: 237 NELPGQPRATQRSGRPIKSICTRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELG 296
Query: 361 VPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 540
VPWSIALNLTYPETVTPYNIERLKELV++GPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS
Sbjct: 297 VPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 356
Query: 541 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 720
DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF
Sbjct: 357 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 416
>AAQ08518.1 RNA polymerase II largest subunit, partial [Amborella trichopoda]
Length = 1013
Score = 476 bits (1226), Expect = e-159
Identities = 230/240 (95%), Positives = 237/240 (98%)
Frame = +1
Query: 1 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD 180
VRPSVMMDTSSRSEDDLTHQLAM+IRHNENLKRQE+NG+PAHIISEFAQLLQFH+ATYFD
Sbjct: 178 VRPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQEKNGAPAHIISEFAQLLQFHVATYFD 237
Query: 181 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 360
NELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+LG
Sbjct: 238 NELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELG 297
Query: 361 VPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 540
VPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIR+DGQRLDLRYLKKS
Sbjct: 298 VPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSG 357
Query: 541 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 720
DHHLELGYKVERHLNDGDFV FNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF
Sbjct: 358 DHHLELGYKVERHLNDGDFVFFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 417
>XP_014660874.1 PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Setaria
italica] KQL00755.1 hypothetical protein SETIT_013247mg
[Setaria italica]
Length = 860
Score = 472 bits (1214), Expect = e-159
Identities = 229/240 (95%), Positives = 237/240 (98%)
Frame = +1
Query: 1 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD 180
VRPSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHII+EFAQLLQFHIATYFD
Sbjct: 256 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFD 315
Query: 181 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 360
NELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INID+LG
Sbjct: 316 NELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELG 375
Query: 361 VPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 540
VPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIR+DGQRLDLRY+KKSS
Sbjct: 376 VPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKKSS 435
Query: 541 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 720
D HL+LGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF
Sbjct: 436 DQHLDLGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 495
>AAS79687.1 RNA polymerase II large subunit, partial [Ginkgo biloba]
Length = 1013
Score = 476 bits (1225), Expect = e-159
Identities = 231/240 (96%), Positives = 238/240 (99%)
Frame = +1
Query: 1 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD 180
VRPSVMMDT+SRSEDDLTHQLAMIIRHNENLKRQERNG+PAHII+EFAQLLQFHIATYFD
Sbjct: 178 VRPSVMMDTTSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIITEFAQLLQFHIATYFD 237
Query: 181 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 360
N+LPG PRATQRSGRPIKSIC+RLKAKEGRIRGNLMGKRVDFSARTVITPDP INIDQLG
Sbjct: 238 NDLPGQPRATQRSGRPIKSICNRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLG 297
Query: 361 VPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 540
VPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIR+DGQRLDLRYLKKSS
Sbjct: 298 VPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSS 357
Query: 541 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 720
DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF
Sbjct: 358 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 417
>AAQ08513.1 RNA polymerase II largest subunit, partial [Pinus nigra]
Length = 1013
Score = 475 bits (1222), Expect = e-159
Identities = 230/240 (95%), Positives = 238/240 (99%)
Frame = +1
Query: 1 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD 180
VRPSVMMDT+SRSEDDLTHQLAMIIRHNENLK+QE+NG+PAHII+EFAQLLQFHIATYFD
Sbjct: 178 VRPSVMMDTTSRSEDDLTHQLAMIIRHNENLKKQEKNGAPAHIITEFAQLLQFHIATYFD 237
Query: 181 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 360
NELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INIDQLG
Sbjct: 238 NELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQLG 297
Query: 361 VPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 540
VPWSIALNLTYPETVTPYN+ERLKELVE+GPHPPPGKTGAKYIIR+DGQRLDLRYLKKSS
Sbjct: 298 VPWSIALNLTYPETVTPYNMERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSS 357
Query: 541 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 720
DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF
Sbjct: 358 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 417
>KYP66634.1 DNA-directed RNA polymerase II subunit RPB1 [Cajanus cajan]
Length = 1327
Score = 483 bits (1242), Expect = e-159
Identities = 239/242 (98%), Positives = 240/242 (99%), Gaps = 2/242 (0%)
Frame = +1
Query: 1 VRPSVMMDTSSRSE--DDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATY 174
VRPSVMMDTSSRSE DDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATY
Sbjct: 256 VRPSVMMDTSSRSEASDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATY 315
Query: 175 FDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 354
FDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ
Sbjct: 316 FDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 375
Query: 355 LGVPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 534
LGVPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIRDDGQRLDLRYLKK
Sbjct: 376 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 435
Query: 535 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 714
SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 436 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 495
Query: 715 DF 720
DF
Sbjct: 496 DF 497
>XP_018854550.1 PREDICTED: DNA-directed RNA polymerase II subunit 1-like, partial
[Juglans regia]
Length = 387
Score = 453 bits (1166), Expect = e-158
Identities = 218/227 (96%), Positives = 225/227 (99%)
Frame = +1
Query: 40 EDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRS 219
+DDLTHQLAMIIRHNENL++QERNG+PAHIISEFAQLLQFH+ATYFDNELPG PRATQRS
Sbjct: 1 QDDLTHQLAMIIRHNENLRKQERNGAPAHIISEFAQLLQFHVATYFDNELPGQPRATQRS 60
Query: 220 GRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPE 399
GRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INID+LGVPWSIALNLTYPE
Sbjct: 61 GRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNLTYPE 120
Query: 400 TVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERH 579
TVTPYNIERLKELVE+GPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERH
Sbjct: 121 TVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERH 180
Query: 580 LNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 720
LNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF
Sbjct: 181 LNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 227
>XP_015868354.1 PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Ziziphus
jujuba]
Length = 1526
Score = 485 bits (1249), Expect = e-158
Identities = 237/240 (98%), Positives = 240/240 (100%)
Frame = +1
Query: 1 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFD 180
VRPSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGSPAHIISEFAQLLQFHIATYFD
Sbjct: 256 VRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFD 315
Query: 181 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLG 360
NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+LG
Sbjct: 316 NELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELG 375
Query: 361 VPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 540
VPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS
Sbjct: 376 VPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSS 435
Query: 541 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 720
DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF
Sbjct: 436 DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADF 495