BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza33_contig00013945
         (596 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003595510.1 replication factor-A carboxy-terminal domain prot...    61   2e-07
XP_013452088.1 replication factor-A carboxy-terminal domain prot...    57   4e-06

>XP_003595510.1 replication factor-A carboxy-terminal domain protein [Medicago
           truncatula] AES65761.1 replication factor-A
           carboxy-terminal domain protein [Medicago truncatula]
          Length = 549

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 15/166 (9%)
 Frame = +1

Query: 1   LGLVNKTYLFKVDLRNFGSR--FDRSFRVKRICSDEIMIEKFKA-----LKSFSKTTEDV 159
           L +V K+YLFKV+  N GS   +++S+RVKR+ +D +++EKF+      +K+  +   ++
Sbjct: 390 LAMVEKSYLFKVET-NLGSSTMYEKSYRVKRVTADPVLVEKFQTKYKDLMKNVHEEDVNL 448

Query: 160 VDGV------ESGEAIMQDLMIKFSDAVSDS-QALDSVVADSLPPPNAIDDSQPVPDDIV 318
           VDGV      +S + I+QDLM K  +  + S   +D  +  S      +     V D  V
Sbjct: 449 VDGVVDGGALKSSDTIVQDLMKKLDEPTAGSVDGIDESLTAS------VHGIGLVQDVAV 502

Query: 319 SLDCTQNDAIVEVGVTPTKRHIGVEGHDGEGSNSGIKK-KAIKVEK 453
             D    DA  +  VT +KR I     + +GS+  ++  K IK EK
Sbjct: 503 MSDGGDVDAPDKRNVTVSKRPIDGSKVEKDGSSKSLELIKRIKTEK 548


>XP_013452088.1 replication factor-A carboxy-terminal domain protein [Medicago
           truncatula] KEH26116.1 replication factor-A
           carboxy-terminal domain protein [Medicago truncatula]
          Length = 428

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 6/156 (3%)
 Frame = +1

Query: 7   LVNKTYLFKVDLR-NFGSRFDRSFRVKRICSDEIMIEKFKALKSFSKTTE---DVVDGVE 174
           LV  T+LFKV+   +  +RF++S+RV+RI ++  ++++F  + + +   E   + V+  E
Sbjct: 256 LVESTFLFKVETNISTDARFEKSYRVRRISNNVDLLKRFTGVPTEAPVVEGSFEAVENAE 315

Query: 175 SGEAIMQDLMIKFSDA-VSDSQALDSVVADSLPPPNAIDDSQPVPDDIVSLDCTQNDAIV 351
           +  ++ Q+L+ KF D+ V  ++ +D+  A                     +D T +    
Sbjct: 316 NDSSVNQNLLKKFGDSKVIGTKDVDAEKA---------------------VDLTND---- 350

Query: 352 EVGVTPTKRHIGVEGHDGEGSNSGIK-KKAIKVEKD 456
           EV VTP KR    +G +G G N  +K  K IKVEKD
Sbjct: 351 EVDVTPAKRSCPFDG-EGSGGNGPVKLLKNIKVEKD 385