BLASTX nr result

ID: Glycyrrhiza33_contig00013849 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza33_contig00013849
         (563 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_013463202.1 RING-H2 zinc finger protein [Medicago truncatula]...    65   2e-09
GAU36069.1 hypothetical protein TSUD_320320 [Trifolium subterran...    59   4e-07
XP_004487829.1 PREDICTED: RING-H2 finger protein ATL2-like [Cice...    55   9e-06

>XP_013463202.1 RING-H2 zinc finger protein [Medicago truncatula] KEH37217.1
           RING-H2 zinc finger protein [Medicago truncatula]
          Length = 288

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 47/87 (54%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
 Frame = +1

Query: 1   CEPEPGSR------VEEENRTGSGREVCCSSSVGLRRKPSFVGVTVEVPPPRNESFRDES 162
           CEPE GS       V  ENR  +G+EV  SSSVGLRRKPSF GVTVEV P RNESFRDES
Sbjct: 178 CEPETGSSSGSTEDVNNENR--AGKEVG-SSSVGLRRKPSFAGVTVEV-PTRNESFRDES 233

Query: 163 GCDXXXXXXXXXXXXXXXKRMLSREWK 243
                             KR+LS  WK
Sbjct: 234 --TQSSSFRSPMSRMSSFKRILSMNWK 258


>GAU36069.1 hypothetical protein TSUD_320320 [Trifolium subterraneum]
          Length = 299

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 41/89 (46%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
 Frame = +1

Query: 1   CEPEP--------GSRVEEENRTGSGREVCCSSSVGLRRKPSFVGVTVEVPPPRNESFRD 156
           CE EP        GS +E+EN   +G+EVC SSSVGLR KPSF GVT+EV P RNE   D
Sbjct: 181 CEAEPETGSSSSSGSGLEDENVNRTGKEVC-SSSVGLRTKPSFAGVTIEV-PSRNELCCD 238

Query: 157 ESGCDXXXXXXXXXXXXXXXKRMLSREWK 243
            S                  KR+LS +WK
Sbjct: 239 -SPSSTQASFRSPMSRMLSFKRILSMDWK 266


>XP_004487829.1 PREDICTED: RING-H2 finger protein ATL2-like [Cicer arietinum]
          Length = 275

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 47/113 (41%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
 Frame = +1

Query: 1   CEPEPGSRVEEENRTGSGREVCCSSSVGLRRKPSFVGVTVEVPPPRNESFRDESGCDXXX 180
           CEPE GS                SSSVGLRRKPSFVGVTV+V P R+ES  D S      
Sbjct: 179 CEPETGSS---------------SSSVGLRRKPSFVGVTVDV-PVRDESCID-SPSSTQS 221

Query: 181 XXXXXXXXXXXXKRMLSREWK----XXXXXXXXXXXXXAAELNAERGGGRDET 327
                       KR+LSREWK                   EL  E+ GGRDET
Sbjct: 222 SFRSPMSRMMSLKRILSREWKGSVSPSSCGGSGGGCSSVVELKVEQ-GGRDET 273


Top