BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza33_contig00013514
         (636 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004498465.1 PREDICTED: nuclear pore complex protein NUP85 [Ci...    54   1e-06
GAU21181.1 hypothetical protein TSUD_10980 [Trifolium subterraneum]    58   3e-06
BAF45348.1 nucleoporin [Lotus japonicus]                               50   8e-06

>XP_004498465.1 PREDICTED: nuclear pore complex protein NUP85 [Cicer arietinum]
          Length = 709

 Score = 53.9 bits (128), Expect(2) = 1e-06
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +1

Query: 169 LYSPVFRVDISWSRSNSLCVSLFAKPSGSPDVREGAKIVEVK 294
           L  P+ R+ ISWSR NSL VSLFA+PS +P+  +GAK+VEVK
Sbjct: 31  LARPISRLAISWSRGNSLRVSLFAEPSVNPNTGDGAKVVEVK 72



 Score = 26.6 bits (57), Expect(2) = 1e-06
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 341 RSSPFALSKAPSQYHLDF 394
           RSS   LSK+PS YHLD+
Sbjct: 103 RSSLSELSKSPSPYHLDW 120


>GAU21181.1 hypothetical protein TSUD_10980 [Trifolium subterraneum]
          Length = 707

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = +1

Query: 169 LYSPVFRVDISWSRSNSLCVSLFAKPSGSPDVREGAKIVEVK 294
           L  P+ RV +SWSR NSL VSLFA+PSGS D  +GAK++EVK
Sbjct: 31  LVRPISRVALSWSRGNSLRVSLFAEPSGSSDAGDGAKVIEVK 72


>BAF45348.1 nucleoporin [Lotus japonicus]
          Length = 711

 Score = 50.1 bits (118), Expect(2) = 8e-06
 Identities = 30/47 (63%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
 Frame = +1

Query: 178 PVFRVDISWSRSNSLCVSLFAKPSG-SPDVR-EGAKIVEVKPPLEAP 312
           P+ RV ISWSR NSL VSLFA+PS  SPD +  GAK+VEVK   E P
Sbjct: 34  PISRVAISWSRGNSLRVSLFAEPSATSPDSQASGAKVVEVKLSGEDP 80



 Score = 27.3 bits (59), Expect(2) = 8e-06
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +2

Query: 341 RSSPFALSKAPSQYHLDF 394
           RSS  ALSK+PS YH+D+
Sbjct: 105 RSSLAALSKSPSPYHVDW 122