BLASTX nr result

ID: Glycyrrhiza33_contig00013484 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza33_contig00013484
         (450 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_013469692.1 zinc finger, C3HC4 type (RING finger) protein [Me...    80   5e-16
XP_004496585.2 PREDICTED: RING-H2 finger protein ATL73-like [Cic...    76   5e-14

>XP_013469692.1 zinc finger, C3HC4 type (RING finger) protein [Medicago truncatula]
           KEH43730.1 zinc finger, C3HC4 type (RING finger) protein
           [Medicago truncatula]
          Length = 194

 Score = 80.5 bits (197), Expect = 5e-16
 Identities = 47/117 (40%), Positives = 62/117 (52%)
 Frame = +1

Query: 100 ILVLILVFSLYDAEAQSPIQPATTPFGSFPNPMWDLSSVGVIIGALIGTXXXXXXXXXXX 279
           +L+L+L    Y A+AQ P+QP + PF      +WD+SS+GVIIG +I T           
Sbjct: 16  LLLLLLCNHHYSAKAQPPVQPVS-PFAP-QTTLWDVSSIGVIIGTIIATLILLFLFITLI 73

Query: 280 XXXAQXXXXXXXXXXXXXXXVHPQLLQTFPILCYSSLKNHINEEAEGPLQCAVCLTD 450
                               ++PQLL+TFPIL YS++  H NE  E PLQCAVCL D
Sbjct: 74  RGFTNSLRADSSKCESDKG-INPQLLKTFPILLYSTIIKHFNESIEDPLQCAVCLGD 129


>XP_004496585.2 PREDICTED: RING-H2 finger protein ATL73-like [Cicer arietinum]
          Length = 217

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
 Frame = +1

Query: 82  MVEPEPILVLILVFSLYDAEAQSPIQPATTPFGSFPNPMWDLSSVGVIIGALIGT---XX 252
           MV+  PI+++ L+   + AEAQSP+QP T    S PN +WD+SS+GVI+GALI T     
Sbjct: 1   MVDSTPIIIIFLLHHHFTAEAQSPLQPETRIGSSTPN-LWDVSSIGVIVGALIATLLLFF 59

Query: 253 XXXXXXXXXXXXAQXXXXXXXXXXXXXXXVHPQLLQTFPILCYSSLKNHINEEAEGPLQC 432
                                        + PQ+L+TFPIL YS +  ++    E P QC
Sbjct: 60  LLLMFLRRFTTSTSENNTLSESKCKPGTGITPQILKTFPILLYSFIFKNLK---ECPQQC 116

Query: 433 AVCLTD 450
           +VCL D
Sbjct: 117 SVCLGD 122


Top