BLASTX nr result
ID: Glycyrrhiza33_contig00012113
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza33_contig00012113
(892 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_009027274.1 RNA polymerase beta' subunit (chloroplast) [Glycy... 532 e-176
AMC32360.1 RNA polymerase beta'' subunit (chloroplast) [Glycyrrh... 527 e-174
YP_009233395.1 RpoC2 (chloroplast) [Wisteria sinensis] AMB27275.... 509 e-167
YP_009161290.1 RpoC2 (chloroplast) [Wisteria floribunda] AJC1003... 508 e-167
YP_009334191.1 RpoC2 (chloroplast) [Caragana microphylla] APL973... 491 e-160
YP_002149735.1 RNA polymerase beta' subunit [Cicer arietinum] AC... 488 e-159
AJE71591.1 RNA polymerase beta'' subunit (plastid) [Melilotus of... 482 e-157
YP_009141612.1 RNA polymerase beta' subunit (chloroplast) [Medic... 481 e-157
AIJ28040.1 RNA polymerase beta' subunit (chloroplast) [Trifolium... 481 e-157
YP_009327946.1 RNA polymerase beta'' subunit (chloroplast) [Medi... 479 e-156
XP_003606032.1 DNA-directed RNA polymerase subunit beta [Medicag... 478 e-156
AFR60125.1 RNA polymerase beta'' subunit (plastid) [Medicago tru... 478 e-156
AFR59973.1 RNA polymerase beta'' subunit (plastid) [Medicago tru... 478 e-156
YP_001381726.2 RNA polymerase beta' subunit [Medicago truncatula] 478 e-156
AGV52603.1 RNA polymerase beta'' subunit (chloroplast) [Medicago... 476 e-155
AGS43974.1 RNA polymerase beta' subunit (plastid) [Vicia faba] 474 e-154
YP_009109857.1 RNA polymerase beta' subunit (chloroplast) [Trifo... 471 e-153
AJE72514.1 RNA polymerase beta'' subunit (plastid) [Medicago lup... 471 e-153
P12227.1 RecName: Full=DNA-directed RNA polymerase subunit beta'... 464 e-152
AMC32374.1 RNA polymerase beta'' subunit (chloroplast) [Vicia am... 467 e-151
>YP_009027274.1 RNA polymerase beta' subunit (chloroplast) [Glycyrrhiza glabra]
AGU00070.1 RNA polymerase beta' subunit (chloroplast)
[Glycyrrhiza glabra]
Length = 1388
Score = 532 bits (1371), Expect = e-176
Identities = 272/296 (91%), Positives = 272/296 (91%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVR FSGDIHFPGE
Sbjct: 669 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRLEKKKKKIELKIFSGDIHFPGE 728
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
MDKISRHSAILIPPGTV NWIYVQWIATTKKKYFVLVRPVILYEIPDSI
Sbjct: 729 MDKISRHSAILIPPGTVKKKNRKQSKKMKNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 788
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS
Sbjct: 789 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 848
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS
Sbjct: 849 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 908
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK
Sbjct: 909 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 964
>AMC32360.1 RNA polymerase beta'' subunit (chloroplast) [Glycyrrhiza lepidota]
Length = 1388
Score = 527 bits (1358), Expect = e-174
Identities = 269/296 (90%), Positives = 271/296 (91%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVR FSGDIHFPGE
Sbjct: 669 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRLEKKKKKIELKIFSGDIHFPGE 728
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
MDKISRHSAILIPPGTV NWIYVQWIATTKKKYFVLVRPVILYEIPDSI
Sbjct: 729 MDKISRHSAILIPPGTVKKKNRKQSKKMKNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 788
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS
Sbjct: 789 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 848
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS
Sbjct: 849 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 908
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IHSKAKIQQSLSQNHGTIR+LLNRNKEC+SLIILSSSNCFQTR FNNVKYHNEIKK
Sbjct: 909 IHSKAKIQQSLSQNHGTIRILLNRNKECRSLIILSSSNCFQTRPFNNVKYHNEIKK 964
>YP_009233395.1 RpoC2 (chloroplast) [Wisteria sinensis] AMB27275.1 RpoC2
(chloroplast) [Wisteria sinensis]
Length = 1367
Score = 509 bits (1311), Expect = e-167
Identities = 260/296 (87%), Positives = 265/296 (89%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILPESSSIMVRNNSI+GI TPITLNIRSRVGGLVR FSGDIHFPGE
Sbjct: 654 EVHILPESSSIMVRNNSIVGIGTPITLNIRSRVGGLVRLEKKKKKIELKIFSGDIHFPGE 713
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
MDKISRHSAILIPPGTV NWIYVQWIATTKKKYFVLVRPVILYEIPDSI
Sbjct: 714 MDKISRHSAILIPPGTVKKKNWKESKKTKNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 773
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
NFVKLFPQDLFQERDNLELKVLNYILYGNGKSI+GISDTRIQLVRTCLVLNW+QDKKSSS
Sbjct: 774 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIQGISDTRIQLVRTCLVLNWNQDKKSSS 833
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
I EALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKR DPSGSGLISDNESD+ININPFYS
Sbjct: 834 IAEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRNDPSGSGLISDNESDQININPFYS 893
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IHS AKIQQSLSQNHGTIRMLLNRNKEC+SLIILSSSNCFQ R FNNVKYHN IKK
Sbjct: 894 IHSTAKIQQSLSQNHGTIRMLLNRNKECRSLIILSSSNCFQMRPFNNVKYHNGIKK 949
>YP_009161290.1 RpoC2 (chloroplast) [Wisteria floribunda] AJC10039.1 RpoC2
(chloroplast) [Wisteria floribunda]
Length = 1367
Score = 508 bits (1308), Expect = e-167
Identities = 259/296 (87%), Positives = 265/296 (89%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILPESSSIMVRNNSI+GI TPITLNIRSRVGGLVR FSGDIHFPGE
Sbjct: 654 EVHILPESSSIMVRNNSIVGIGTPITLNIRSRVGGLVRLEKKKKKIELKIFSGDIHFPGE 713
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
MDKISRHSAILIPPGTV NWIYVQWIATTKKKYFVLVRPVILYEIPDSI
Sbjct: 714 MDKISRHSAILIPPGTVKKKIWKESKKTKNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 773
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
NFVKLFPQDLFQERDNLELKVLNYILYGNGKSI+GISDTRIQLVRTCLVLNW+QDKKSSS
Sbjct: 774 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIQGISDTRIQLVRTCLVLNWNQDKKSSS 833
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
I EALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKR DPSGSGLISDNE+D+ININPFYS
Sbjct: 834 IAEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRNDPSGSGLISDNETDQININPFYS 893
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IHS AKIQQSLSQNHGTIRMLLNRNKEC+SLIILSSSNCFQ R FNNVKYHN IKK
Sbjct: 894 IHSTAKIQQSLSQNHGTIRMLLNRNKECRSLIILSSSNCFQMRPFNNVKYHNGIKK 949
>YP_009334191.1 RpoC2 (chloroplast) [Caragana microphylla] APL97397.1 RpoC2
(chloroplast) [Caragana microphylla]
Length = 1372
Score = 491 bits (1264), Expect = e-160
Identities = 254/296 (85%), Positives = 260/296 (87%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILPESSSIMVRNNS++GI TPITLNIRSRVGGLVR FSG+IHFPGE
Sbjct: 671 EVHILPESSSIMVRNNSLVGIGTPITLNIRSRVGGLVRLEKKKKKMELKIFSGNIHFPGE 730
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
MDKISRHSAILIPPGTV NW YVQWIATTKKKYFVLVRPVILYEIPDSI
Sbjct: 731 MDKISRHSAILIPPGTVKKKWKESKKMN-NWTYVQWIATTKKKYFVLVRPVILYEIPDSI 789
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
+FVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS
Sbjct: 790 HFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 849
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKR D SG G ISDNESDRININPF S
Sbjct: 850 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRNDSSGLGCISDNESDRININPFLS 909
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IHSKAKIQQS SQN GTIRMLLNRNKEC+SLIILSSSNCFQ R FNNVKYHN I+K
Sbjct: 910 IHSKAKIQQSRSQNQGTIRMLLNRNKECRSLIILSSSNCFQMRPFNNVKYHNGIRK 965
>YP_002149735.1 RNA polymerase beta' subunit [Cicer arietinum] ACH41072.1 RNA
polymerase beta' subunit (chloroplast) [Cicer arietinum]
Length = 1376
Score = 488 bits (1257), Expect = e-159
Identities = 247/296 (83%), Positives = 258/296 (87%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILPESSSIM+RNNS++GI TPITLNIRSRVGGLVR FSG+IHFPGE
Sbjct: 670 EVHILPESSSIMIRNNSLVGIGTPITLNIRSRVGGLVRLEKKKKKIELKIFSGNIHFPGE 729
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
MDKISRHS+ILIPPGTV NWIYVQWIATTKKKYFVLVRPVILYEIPDSI
Sbjct: 730 MDKISRHSSILIPPGTVKKKKRKEAKKINNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 789
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
+FVKLFPQDLFQERDNLEL+VLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQ KKSSS
Sbjct: 790 HFVKLFPQDLFQERDNLELRVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQGKKSSS 849
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
IEEA ASFVEVSTNGLIEYF+RIDLVKSH SYIRKR DPSG GLI D ESDR+NINPF+S
Sbjct: 850 IEEAPASFVEVSTNGLIEYFIRIDLVKSHMSYIRKRNDPSGLGLIPDKESDRVNINPFFS 909
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IHSK KIQQSL QNHGTIRMLLNRNKEC+S IILSSSNCFQ R FNNVKYHN IKK
Sbjct: 910 IHSKTKIQQSLIQNHGTIRMLLNRNKECRSWIILSSSNCFQMRPFNNVKYHNGIKK 965
>AJE71591.1 RNA polymerase beta'' subunit (plastid) [Melilotus officinalis]
AJE71662.1 RNA polymerase beta'' subunit (plastid)
[Melilotus albus]
Length = 1376
Score = 482 bits (1240), Expect = e-157
Identities = 247/296 (83%), Positives = 259/296 (87%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILPESSSIMVRNNS++GI TPIT NIRSRVGGLVR FSG+IHFPGE
Sbjct: 671 EVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLVRLEKKKKKIELKIFSGNIHFPGE 730
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
MDKISRHS+ILIPPGTV NWIYVQWIATTKKKYFVLVRPVILYEIPDSI
Sbjct: 731 MDKISRHSSILIPPGTVKKKKWKESKKINNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 790
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
+F KLFP+DLFQERDNLELKV+NYILYGNGKSIRGISDTRIQLVRTCLVLNWDQ KKSSS
Sbjct: 791 HFGKLFPKDLFQERDNLELKVVNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQAKKSSS 850
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
IEEA ASFVEVSTNGLIEYFLRIDLVKS+TSYIRKR DPSG GLI+DNESD ININPF+S
Sbjct: 851 IEEAPASFVEVSTNGLIEYFLRIDLVKSNTSYIRKRNDPSGLGLIADNESDPININPFFS 910
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IHSKAKIQQSLSQNHGTIRMLLNRNKE +S IILSSSNCFQ R FNNVK+HN IKK
Sbjct: 911 IHSKAKIQQSLSQNHGTIRMLLNRNKEYRSWIILSSSNCFQMRPFNNVKFHNGIKK 966
>YP_009141612.1 RNA polymerase beta' subunit (chloroplast) [Medicago hybrida]
YP_009141687.1 RNA polymerase beta' subunit (chloroplast)
[Medicago papillosa] AIL56137.1 RNA polymerase beta'
subunit (chloroplast) [Medicago hybrida] AIL56212.1 RNA
polymerase beta' subunit (chloroplast) [Medicago
papillosa] AMC32363.1 RNA polymerase beta'' subunit
(chloroplast) [Medicago sativa] ANS57907.1 RNA polymerase
beta' subunit (chloroplast) [Medicago sativa]
Length = 1370
Score = 481 bits (1239), Expect = e-157
Identities = 246/296 (83%), Positives = 260/296 (87%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILPESSSIMVRNNS++GI TPIT NIRSRVGGLVR FSG+IHFPGE
Sbjct: 669 EVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLVRLEKKKKKIELKIFSGNIHFPGE 728
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
DKISRHS+ILIPPGTV NWIYVQWI TTKKKYFVLVRPVILYEIPDSI
Sbjct: 729 RDKISRHSSILIPPGTVKKKWKESKKIH-NWIYVQWITTTKKKYFVLVRPVILYEIPDSI 787
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
+FVKLFPQDLFQERDNLELKV+NYILYGNGKSIRGISDTRIQLVRTCLVLNWDQ KKS+S
Sbjct: 788 DFVKLFPQDLFQERDNLELKVVNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQGKKSTS 847
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
IEEA +SFVEVSTNGLIEYFLRIDLVKS+TSYIRKR DPSG GLI+DNESDRININPF+S
Sbjct: 848 IEEAPSSFVEVSTNGLIEYFLRIDLVKSNTSYIRKRNDPSGLGLIADNESDRININPFFS 907
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IHSKAKI++SLSQNHGTIRMLLNRNKEC+S IILSSSNCFQ R FNNVKYHN IKK
Sbjct: 908 IHSKAKIKKSLSQNHGTIRMLLNRNKECRSWIILSSSNCFQIRPFNNVKYHNGIKK 963
>AIJ28040.1 RNA polymerase beta' subunit (chloroplast) [Trifolium lupinaster]
Length = 1367
Score = 481 bits (1237), Expect = e-157
Identities = 248/296 (83%), Positives = 260/296 (87%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILPESSSIMVRNNS++GI TPIT NIRSRVGGL+R FSG+IHFPGE
Sbjct: 671 EVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLLRLEKKKKKIELKIFSGNIHFPGE 730
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
+DKISRHSAILIPPGTV NWIYVQWIATTKKKYFVLVRPVILYEIPDSI
Sbjct: 731 VDKISRHSAILIPPGTVKKKRKESKKIN-NWIYVQWIATTKKKYFVLVRPVILYEIPDSI 789
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
+FVKLFPQDLFQERDNLELKV+NYILYGNGKSIRGISDTRIQLVRTCLVLNWDQ KKSSS
Sbjct: 790 HFVKLFPQDLFQERDNLELKVVNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQVKKSSS 849
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
IEEA ASFVEVSTNGLIEYFLRIDLVKS+TSYIRKR DPSG GLI+DNE D ININPF+S
Sbjct: 850 IEEAPASFVEVSTNGLIEYFLRIDLVKSNTSYIRKRNDPSGLGLIADNELDGININPFFS 909
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IHSKAKIQQS+SQNHGTIRMLLNRNKE +S IILSSSNCFQ RSFNNVKYHN IKK
Sbjct: 910 IHSKAKIQQSISQNHGTIRMLLNRNKESRSWIILSSSNCFQMRSFNNVKYHNGIKK 965
>YP_009327946.1 RNA polymerase beta'' subunit (chloroplast) [Medicago falcata]
AOG66214.1 RNA polymerase beta'' subunit (chloroplast)
[Medicago sativa] APC60490.1 RNA polymerase beta''
subunit (chloroplast) [Medicago falcata]
Length = 1374
Score = 479 bits (1232), Expect = e-156
Identities = 244/296 (82%), Positives = 260/296 (87%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILPESSSIMVRNNS++GI TPIT NIRSRVGGLVR FSG+IHFPGE
Sbjct: 673 EVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLVRLEKKKKKIELKIFSGNIHFPGE 732
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
DKISRHS+ILIPPGTV NWIYVQWI T+KKKYFVLVRPVILYEIPDSI
Sbjct: 733 RDKISRHSSILIPPGTVKKKWKESKKIN-NWIYVQWITTSKKKYFVLVRPVILYEIPDSI 791
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
+FVKLFPQDLFQERDNLELKV+NYILYGNGKSIRGISDTRIQLVRTCLVLNWDQ KKS+S
Sbjct: 792 DFVKLFPQDLFQERDNLELKVVNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQGKKSTS 851
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
IEEA +SFVEVSTNGLIEYFLRIDLVKS+TSYIRKR DPSG GLI+DNESDRININPF+S
Sbjct: 852 IEEAPSSFVEVSTNGLIEYFLRIDLVKSNTSYIRKRNDPSGLGLIADNESDRININPFFS 911
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IHSKAK+++SLSQNHGTIRMLLNRNKEC+S IILSSSNCFQ R FNNVKYHN IKK
Sbjct: 912 IHSKAKMKKSLSQNHGTIRMLLNRNKECRSWIILSSSNCFQIRPFNNVKYHNGIKK 967
>XP_003606032.1 DNA-directed RNA polymerase subunit beta [Medicago truncatula]
AES88229.1 DNA-directed RNA polymerase subunit beta
[Medicago truncatula]
Length = 1368
Score = 478 bits (1231), Expect = e-156
Identities = 244/296 (82%), Positives = 259/296 (87%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILPESSSIMVRNNS++GI TPIT NIRSRVGGLVR FSG+IHFPGE
Sbjct: 673 EVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLVRLEKKKKKIELKLFSGNIHFPGE 732
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
DKISRHS+ILIPPGTV NWIYVQWIATTKKKYFVLVRPVILYEIPDSI
Sbjct: 733 RDKISRHSSILIPPGTVKKKRKESKKIN-NWIYVQWIATTKKKYFVLVRPVILYEIPDSI 791
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
+F+KLFPQDLFQERDNLELKV+NYILYGNGKSIRGISDTRIQLVRTCLVLNWDQ KKS S
Sbjct: 792 DFIKLFPQDLFQERDNLELKVVNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQGKKSPS 851
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
IEEA +SFVEVSTNGLIEYFLRIDLVKS+T+YIRKR DPSG GLI+DNESDRININPF+S
Sbjct: 852 IEEAPSSFVEVSTNGLIEYFLRIDLVKSNTAYIRKRNDPSGLGLIADNESDRININPFFS 911
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IH KAKI++SLSQNHGTIRMLLNRNKEC+S IILSSSNCFQ R FNNVKYHN IKK
Sbjct: 912 IHYKAKIKKSLSQNHGTIRMLLNRNKECRSWIILSSSNCFQIRPFNNVKYHNGIKK 967
>AFR60125.1 RNA polymerase beta'' subunit (plastid) [Medicago truncatula]
Length = 1370
Score = 478 bits (1231), Expect = e-156
Identities = 244/296 (82%), Positives = 259/296 (87%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILPESSSIMVRNNS++GI TPIT NIRSRVGGLVR FSG+IHFPGE
Sbjct: 669 EVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLVRFEKKKKKIELKLFSGNIHFPGE 728
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
DKISRHS+ILIPPGTV NWIYVQWIATTKKKYFVLVRPVILYEIPDSI
Sbjct: 729 RDKISRHSSILIPPGTVKKKRKESKKIN-NWIYVQWIATTKKKYFVLVRPVILYEIPDSI 787
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
+F+KLFPQDLFQERDNLELKV+NYILYGNGKSIRGISDTRIQLVRTCLVLNWDQ KKS S
Sbjct: 788 DFIKLFPQDLFQERDNLELKVVNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQGKKSPS 847
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
IEEA +SFVEVSTNGLIEYFLRIDLVKS+T+YIRKR DPSG GLI+DNESDRININPF+S
Sbjct: 848 IEEAPSSFVEVSTNGLIEYFLRIDLVKSNTAYIRKRNDPSGLGLIADNESDRININPFFS 907
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IH KAKI++SLSQNHGTIRMLLNRNKEC+S IILSSSNCFQ R FNNVKYHN IKK
Sbjct: 908 IHYKAKIKKSLSQNHGTIRMLLNRNKECRSWIILSSSNCFQIRPFNNVKYHNGIKK 963
>AFR59973.1 RNA polymerase beta'' subunit (plastid) [Medicago truncatula]
AFR60049.1 RNA polymerase beta'' subunit (plastid)
[Medicago truncatula]
Length = 1370
Score = 478 bits (1231), Expect = e-156
Identities = 244/296 (82%), Positives = 259/296 (87%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILPESSSIMVRNNS++GI TPIT NIRSRVGGLVR FSG+IHFPGE
Sbjct: 669 EVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLVRLEKKKKKIELKLFSGNIHFPGE 728
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
DKISRHS+ILIPPGTV NWIYVQWIATTKKKYFVLVRPVILYEIPDSI
Sbjct: 729 RDKISRHSSILIPPGTVKKKRKESKKIN-NWIYVQWIATTKKKYFVLVRPVILYEIPDSI 787
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
+F+KLFPQDLFQERDNLELKV+NYILYGNGKSIRGISDTRIQLVRTCLVLNWDQ KKS S
Sbjct: 788 DFIKLFPQDLFQERDNLELKVVNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQGKKSPS 847
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
IEEA +SFVEVSTNGLIEYFLRIDLVKS+T+YIRKR DPSG GLI+DNESDRININPF+S
Sbjct: 848 IEEAPSSFVEVSTNGLIEYFLRIDLVKSNTAYIRKRNDPSGLGLIADNESDRININPFFS 907
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IH KAKI++SLSQNHGTIRMLLNRNKEC+S IILSSSNCFQ R FNNVKYHN IKK
Sbjct: 908 IHYKAKIKKSLSQNHGTIRMLLNRNKECRSWIILSSSNCFQIRPFNNVKYHNGIKK 963
>YP_001381726.2 RNA polymerase beta' subunit [Medicago truncatula]
Length = 1374
Score = 478 bits (1231), Expect = e-156
Identities = 244/296 (82%), Positives = 259/296 (87%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILPESSSIMVRNNS++GI TPIT NIRSRVGGLVR FSG+IHFPGE
Sbjct: 673 EVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLVRLEKKKKKIELKLFSGNIHFPGE 732
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
DKISRHS+ILIPPGTV NWIYVQWIATTKKKYFVLVRPVILYEIPDSI
Sbjct: 733 RDKISRHSSILIPPGTVKKKRKESKKIN-NWIYVQWIATTKKKYFVLVRPVILYEIPDSI 791
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
+F+KLFPQDLFQERDNLELKV+NYILYGNGKSIRGISDTRIQLVRTCLVLNWDQ KKS S
Sbjct: 792 DFIKLFPQDLFQERDNLELKVVNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQGKKSPS 851
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
IEEA +SFVEVSTNGLIEYFLRIDLVKS+T+YIRKR DPSG GLI+DNESDRININPF+S
Sbjct: 852 IEEAPSSFVEVSTNGLIEYFLRIDLVKSNTAYIRKRNDPSGLGLIADNESDRININPFFS 911
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IH KAKI++SLSQNHGTIRMLLNRNKEC+S IILSSSNCFQ R FNNVKYHN IKK
Sbjct: 912 IHYKAKIKKSLSQNHGTIRMLLNRNKECRSWIILSSSNCFQIRPFNNVKYHNGIKK 967
>AGV52603.1 RNA polymerase beta'' subunit (chloroplast) [Medicago truncatula f.
tricycla]
Length = 1370
Score = 476 bits (1225), Expect = e-155
Identities = 244/296 (82%), Positives = 258/296 (87%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILPESSSIMVRNNS++GI TPIT NIRSRVGGLVR FSG+IHFPGE
Sbjct: 669 EVHILPESSSIMVRNNSLVGIGTPITFNIRSRVGGLVRLEKKKKKIELKLFSGNIHFPGE 728
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
DKISRHS+ILIPPGTV NWIYVQWIATTKKKYFVLVRPVILYEIPDSI
Sbjct: 729 RDKISRHSSILIPPGTVKKKRKESKKIN-NWIYVQWIATTKKKYFVLVRPVILYEIPDSI 787
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
+F KLFPQDLFQERDNLELKV+NYILYGNGKSIRGISDTRIQLVRTCLVLNWDQ KKS S
Sbjct: 788 DFRKLFPQDLFQERDNLELKVVNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQGKKSPS 847
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
IEEA +SFVEVSTNGLIEYFLRIDLVKS+T+YIRKR DPSG GLI+DNESDRININPF+S
Sbjct: 848 IEEAPSSFVEVSTNGLIEYFLRIDLVKSNTAYIRKRNDPSGLGLIADNESDRININPFFS 907
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IH KAKI++SLSQNHGTIRMLLNRNKEC+S IILSSSNCFQ R FNNVKYHN IKK
Sbjct: 908 IHYKAKIKKSLSQNHGTIRMLLNRNKECRSWIILSSSNCFQIRPFNNVKYHNGIKK 963
>AGS43974.1 RNA polymerase beta' subunit (plastid) [Vicia faba]
Length = 1374
Score = 474 bits (1219), Expect = e-154
Identities = 242/296 (81%), Positives = 254/296 (85%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILPESSS+MVRNNS++GI TPIT NIRSRVGGLVR FSG+IHFPGE
Sbjct: 672 EVHILPESSSLMVRNNSLVGIGTPITFNIRSRVGGLVRLEKKKKKIELKIFSGNIHFPGE 731
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
MDKISRHSAIL PPGTV NWIYVQWIATTKKKYFVLVRPVILYEIPDSI
Sbjct: 732 MDKISRHSAILRPPGTVKKKKCKESKKFKNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 791
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
NFVKLFPQDLFQE+DNLELKV+NYILYGNGKSIRGISDTRIQLVRTCLV NWD KKSSS
Sbjct: 792 NFVKLFPQDLFQEKDNLELKVVNYILYGNGKSIRGISDTRIQLVRTCLVFNWDHGKKSSS 851
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
IEEA ASF+EVSTNGLIEYFLRIDLVKS+TSYIRKR DPSG GLI DN+SDR INPF+S
Sbjct: 852 IEEAPASFIEVSTNGLIEYFLRIDLVKSNTSYIRKRNDPSGLGLIRDNQSDR--INPFFS 909
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IHSK KIQQSLSQNHGTIRMLLN+ KEC+S IILSSSNCFQ R FNNVKYHN IKK
Sbjct: 910 IHSKGKIQQSLSQNHGTIRMLLNKKKECRSWIILSSSNCFQMRPFNNVKYHNGIKK 965
>YP_009109857.1 RNA polymerase beta' subunit (chloroplast) [Trifolium glanduliferum]
AIJ27897.1 RNA polymerase beta' subunit (chloroplast)
[Trifolium glanduliferum]
Length = 1364
Score = 471 bits (1212), Expect = e-153
Identities = 242/296 (81%), Positives = 256/296 (86%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILPESSSIMVRNNS++GI TPIT N+RSRVGGL+R FSG+IHFPGE
Sbjct: 668 EVHILPESSSIMVRNNSLVGIGTPITFNLRSRVGGLLRLEKKKKKIELKIFSGNIHFPGE 727
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
+DKISRHS IL+PPGT NWIYVQWIATTKKKYFVLVRPVILYEIPDSI
Sbjct: 728 VDKISRHSVILLPPGT-EKKKGKESKKINNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 786
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
+FVKLF QDLFQERDNLELKV+NYILYGNGKSIRGISD RI LVRTCLVLNWDQ KKSSS
Sbjct: 787 HFVKLFSQDLFQERDNLELKVVNYILYGNGKSIRGISDPRIPLVRTCLVLNWDQGKKSSS 846
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
IEEA ASFVEVSTNGLIEYFLRIDLVKS+TSYIRKR DPSG GLI+DNE DRININPF+S
Sbjct: 847 IEEASASFVEVSTNGLIEYFLRIDLVKSNTSYIRKRYDPSGLGLIADNELDRININPFFS 906
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IHSKAKIQQS+SQNHGTIRMLLNRNKE +S IILSSSNCFQ RSFNNVKYHN IKK
Sbjct: 907 IHSKAKIQQSISQNHGTIRMLLNRNKESRSWIILSSSNCFQMRSFNNVKYHNGIKK 962
>AJE72514.1 RNA polymerase beta'' subunit (plastid) [Medicago lupulina]
Length = 1368
Score = 471 bits (1212), Expect = e-153
Identities = 242/296 (81%), Positives = 256/296 (86%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILPESSSIMVRNNS++GI TPIT IRSRVGGLVR FSG+IHFPGE
Sbjct: 669 EVHILPESSSIMVRNNSLVGIGTPITFTIRSRVGGLVRLEKKKKKIELKIFSGNIHFPGE 728
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
DKISRH++ILIPP TV NWIYVQWIATTKKK FVLVRPVILYEIPDSI
Sbjct: 729 RDKISRHNSILIPPRTVKKKWKESKKIN-NWIYVQWIATTKKKSFVLVRPVILYEIPDSI 787
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
+FVKLFPQDLFQERDNLELKV+NYILYGNGKSIRGISDTRIQLVRTCLVLNWDQ KKS S
Sbjct: 788 DFVKLFPQDLFQERDNLELKVVNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQGKKSPS 847
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
IEEA +SFVEVSTNGLIEYFLRIDLVKS+TSYIRKR DPSG GLI+DNESDRININPF+S
Sbjct: 848 IEEAPSSFVEVSTNGLIEYFLRIDLVKSNTSYIRKRNDPSGLGLIADNESDRININPFFS 907
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IHSKAKIQ+SLSQNHGTIRM LNRNKEC+S IILSSSNCFQ R FNN+KYHN IKK
Sbjct: 908 IHSKAKIQKSLSQNHGTIRMFLNRNKECRSWIILSSSNCFQIRPFNNLKYHNGIKK 963
>P12227.1 RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta''; Short=RNA polymerase subunit beta''
CAA27545.1 unnamed protein product, partial (chloroplast)
[Pisum sativum]
Length = 1163
Score = 464 bits (1195), Expect = e-152
Identities = 238/296 (80%), Positives = 251/296 (84%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILP+SSS+MVRNNS++GI TPIT NIRSRVGGLVR FSG+IHFPGE
Sbjct: 464 EVHILPKSSSLMVRNNSLVGIGTPITFNIRSRVGGLVRLDKKKKKIELKIFSGNIHFPGE 523
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
MDKISRHSAILIPPGTV NWIYVQWIATTKKKYFVLVRPVILYEIPDS
Sbjct: 524 MDKISRHSAILIPPGTVKKKKCNKSKKIKNWIYVQWIATTKKKYFVLVRPVILYEIPDSN 583
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
NFVKLFPQDLFQE+DNLELKV+NYILYGNGKSIRGISDTRIQLVRTCLV NWD K SSS
Sbjct: 584 NFVKLFPQDLFQEKDNLELKVVNYILYGNGKSIRGISDTRIQLVRTCLVFNWDDGKNSSS 643
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
IEEA ASF+EV TNGLIEYFLRIDLVKS+TSYIRKR +PSG GLI DN+SDR INPF+S
Sbjct: 644 IEEAPASFIEVRTNGLIEYFLRIDLVKSNTSYIRKRNEPSGFGLIGDNKSDR--INPFFS 701
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IHSK KIQQSLSQNHGTIRMLLNRNKEC+S IILSSSNCFQ R FNN K HN IKK
Sbjct: 702 IHSKGKIQQSLSQNHGTIRMLLNRNKECRSWIILSSSNCFQMRPFNNEKSHNGIKK 757
>AMC32374.1 RNA polymerase beta'' subunit (chloroplast) [Vicia americana var.
minor]
Length = 1367
Score = 467 bits (1202), Expect = e-151
Identities = 241/296 (81%), Positives = 252/296 (85%)
Frame = +3
Query: 3 EVHILPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXXFSGDIHFPGE 182
EVHILPESSS+MVRNNS++GI TPIT NIRSRVGGLVR FSG+IHFPGE
Sbjct: 668 EVHILPESSSLMVRNNSLVGIGTPITFNIRSRVGGLVRLEKKKKKIKLKIFSGNIHFPGE 727
Query: 183 MDKISRHSAILIPPGTVXXXXXXXXXXXXNWIYVQWIATTKKKYFVLVRPVILYEIPDSI 362
MDKISRHSAILIPPGTV NWIYVQ IATTKKKYFVLVRPVI YEIPDSI
Sbjct: 728 MDKISRHSAILIPPGTVKKKKCKESKKIKNWIYVQCIATTKKKYFVLVRPVIFYEIPDSI 787
Query: 363 NFVKLFPQDLFQERDNLELKVLNYILYGNGKSIRGISDTRIQLVRTCLVLNWDQDKKSSS 542
NFVKLFPQDLFQE+DNLELKV+NYILYGNGK IRGISDTRIQLVRTCLV NWD KKSSS
Sbjct: 788 NFVKLFPQDLFQEKDNLELKVVNYILYGNGKFIRGISDTRIQLVRTCLVFNWDHGKKSSS 847
Query: 543 IEEALASFVEVSTNGLIEYFLRIDLVKSHTSYIRKRKDPSGSGLISDNESDRININPFYS 722
IEEA ASF+EVSTNGLIEYFLRIDLVKS+TSYIRKR DPSG GLI DN+SDR INPF+S
Sbjct: 848 IEEAPASFIEVSTNGLIEYFLRIDLVKSNTSYIRKRNDPSGLGLIRDNKSDR--INPFFS 905
Query: 723 IHSKAKIQQSLSQNHGTIRMLLNRNKECQSLIILSSSNCFQTRSFNNVKYHNEIKK 890
IHSK KIQQSLSQNHGTIRMLLNRNKEC+S IILSSSNCFQ R FNNVK HN IKK
Sbjct: 906 IHSKGKIQQSLSQNHGTIRMLLNRNKECRSWIILSSSNCFQMRPFNNVKSHNGIKK 961