BLASTX nr result

ID: Glycyrrhiza33_contig00009187 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza33_contig00009187
         (531 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_064004.1 orf107b gene product (mitochondrion) [Beta vulgaris ...   193   6e-61
XP_002446122.1 hypothetical protein SORBIDRAFT_06g002025, partia...    84   1e-17
OIT04243.1 hypothetical protein A4A49_22702 [Nicotiana attenuata]      79   4e-16
XP_002439577.1 hypothetical protein SORBIDRAFT_09g014016, partia...    69   5e-12
XP_016652391.1 PREDICTED: NADH-ubiquinone oxidoreductase chain 2...    64   6e-09
XP_003593389.1 transmembrane protein, putative [Medicago truncat...    46   9e-08
XP_002868452.1 predicted protein [Arabidopsis lyrata subsp. lyra...    53   5e-06
CBI23503.3 unnamed protein product, partial [Vitis vinifera]           56   5e-06

>NP_064004.1 orf107b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] YP_004222369.1 hypothetical protein
           BevumaM_p136 (mitochondrion) [Beta vulgaris subsp.
           maritima] YP_004842174.1 hypothetical protein BemaM_p130
           (mitochondrion) [Beta macrocarpa] BAA99316.1 orf107b
           (mitochondrion) [Beta vulgaris subsp. vulgaris]
           CBJ14008.1 hypothetical protein (mitochondrion) [Beta
           vulgaris subsp. maritima] CBJ17584.1 hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
           CBJ20702.1 hypothetical protein (mitochondrion) [Beta
           vulgaris subsp. maritima] CBX24979.1 hypothetical
           protein (mitochondrion) [Beta macrocarpa] CBL54138.1
           hypothetical protein (mitochondrion) [Beta vulgaris
           subsp. maritima]
          Length = 107

 Score =  193 bits (490), Expect = 6e-61
 Identities = 96/106 (90%), Positives = 99/106 (93%)
 Frame = -2

Query: 530 SSSRPIDHGTNRVGRPNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSQAFSSTSPLQSS 351
           SS RPIDHGTNRVGRPNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPS+AFSST PLQSS
Sbjct: 3   SSCRPIDHGTNRVGRPNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSRAFSSTFPLQSS 62

Query: 350 IKLAFPRRYEMGVFPSPIVCIGLASSRTKEAFWRARACRKADHYIS 213
           IKLAF RR EMGVFPSPIVCIGLASSR+K  + RARACRKADHYIS
Sbjct: 63  IKLAFSRRSEMGVFPSPIVCIGLASSRSK-LYLRARACRKADHYIS 107


>XP_002446122.1 hypothetical protein SORBIDRAFT_06g002025, partial [Sorghum
           bicolor]
          Length = 132

 Score = 84.0 bits (206), Expect = 1e-17
 Identities = 38/43 (88%), Positives = 38/43 (88%)
 Frame = -2

Query: 530 SSSRPIDHGTNRVGRPNHHTTRIDANPPRYRTCDSHRIRLAQR 402
           SSSRPIDHGTNRV RPNHHTT IDANPP YRTCDSHRIRL  R
Sbjct: 6   SSSRPIDHGTNRVSRPNHHTTCIDANPPPYRTCDSHRIRLTVR 48


>OIT04243.1 hypothetical protein A4A49_22702 [Nicotiana attenuata]
          Length = 81

 Score = 78.6 bits (192), Expect = 4e-16
 Identities = 38/55 (69%), Positives = 43/55 (78%)
 Frame = +3

Query: 186 FRCSRRSLLAYVVVGLPTRTRPPESLLGSGRSQADTYDRRRKDPHFIAPGERKFD 350
           ++    SLLAYVVV LP   RPPE LLGSGR QADTY+R R+DP+FIAP ERKFD
Sbjct: 15  YKSCSNSLLAYVVVELPALIRPPECLLGSGRRQADTYNRGREDPYFIAPEERKFD 69


>XP_002439577.1 hypothetical protein SORBIDRAFT_09g014016, partial [Sorghum
           bicolor]
          Length = 100

 Score = 68.6 bits (166), Expect = 5e-12
 Identities = 32/47 (68%), Positives = 32/47 (68%)
 Frame = +3

Query: 390 WI*ESLCEPYXXXXXXXXXXXXXXYTCSVVVGPTHPICSMIYGSTGA 530
           WI ESLCEPY              YTCSVVVGPTHPICSMIYGSTGA
Sbjct: 6   WIFESLCEPYAVRVARTVRRGVRVYTCSVVVGPTHPICSMIYGSTGA 52


>XP_016652391.1 PREDICTED: NADH-ubiquinone oxidoreductase chain 2 [Prunus mume]
          Length = 388

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 30/44 (68%), Positives = 30/44 (68%)
 Frame = +3

Query: 399 ESLCEPYXXXXXXXXXXXXXXYTCSVVVGPTHPICSMIYGSTGA 530
           ESLCEPY              YTCSVVVGPTHPICSMIYGSTGA
Sbjct: 87  ESLCEPYAVRVARTVTRGVRVYTCSVVVGPTHPICSMIYGSTGA 130


>XP_003593389.1 transmembrane protein, putative [Medicago truncatula] AES63640.1
           transmembrane protein, putative [Medicago truncatula]
          Length = 60

 Score = 46.2 bits (108), Expect(2) = 9e-08
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = +3

Query: 462 YTCSVVVGPTHPICSMIYGSTGA 530
           YT SVV+GPTHPICSMIY STGA
Sbjct: 25  YTFSVVLGPTHPICSMIYASTGA 47



 Score = 37.4 bits (85), Expect(2) = 9e-08
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +2

Query: 389 MDLGVFVRAVCGESRTYGNEG 451
           MDLGVFVR +CGESR  GN+G
Sbjct: 1   MDLGVFVREMCGESRRCGNKG 21


>XP_002868452.1 predicted protein [Arabidopsis lyrata subsp. lyrata] EFH44711.1
           predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 96

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 29/48 (60%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
 Frame = +3

Query: 189 RCSRRSLLAYVVVGLPTRTRPPESLLGSGRSQA----DTYDRRRKDPH 320
           R     LLAYV+VGLPTRTRPPE LL     +A      YDRRRKDPH
Sbjct: 8   RVPAAGLLAYVMVGLPTRTRPPECLLFVVLDEAKPIHTIYDRRRKDPH 55


>CBI23503.3 unnamed protein product, partial [Vitis vinifera]
          Length = 526

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 37/85 (43%), Positives = 38/85 (44%)
 Frame = +3

Query: 276 RSQADTYDRRRKDPHFIAPGERKFDXXXXXXXXXXXXXWI*ESLCEPYXXXXXXXXXXXX 455
           RSQADTYDRRRKDP F +                    W                     
Sbjct: 8   RSQADTYDRRRKDPPFHST-------------------W-----------------GTGV 31

Query: 456 XXYTCSVVVGPTHPICSMIYGSTGA 530
             YT SV VGPTHPICSMIYGSTGA
Sbjct: 32  RVYTYSVRVGPTHPICSMIYGSTGA 56


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