BLASTX nr result

ID: Glycyrrhiza33_contig00006032 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza33_contig00006032
         (337 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AQK91777.1 E3 ubiquitin-protein ligase SIS3 [Zea mays]                 55   1e-06

>AQK91777.1 E3 ubiquitin-protein ligase SIS3 [Zea mays]
          Length = 277

 Score = 55.1 bits (131), Expect = 1e-06
 Identities = 34/77 (44%), Positives = 41/77 (53%), Gaps = 15/77 (19%)
 Frame = +2

Query: 152 ICTASPIPP-SLYSMHAFS--------------PA*GRSFNTTPRLSSRVSLKSNPMAIR 286
           I T SP+PP SL    AF               P   + F     LSS ++ ++  M +R
Sbjct: 16  ITTVSPLPPRSLSPRQAFGRIGVASLRCQRRTPPLPPQCFRLLAGLSSALNKRTKTMPMR 75

Query: 287 GVDFKWYDGFFLSMLAT 337
           GVDFKWYDGFFLSMLAT
Sbjct: 76  GVDFKWYDGFFLSMLAT 92


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