BLASTX nr result

ID: Glycyrrhiza33_contig00005960 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza33_contig00005960
         (953 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019187503.1 PREDICTED: probable U6 snRNA-associated Sm-like p...   198   2e-60
KRH71563.1 hypothetical protein GLYMA_02G155300 [Glycine max]         198   2e-60
XP_019452641.1 PREDICTED: probable U6 snRNA-associated Sm-like p...   198   2e-60
XP_006588395.1 PREDICTED: uncharacterized protein LOC100500134 i...   198   2e-60
KRH71562.1 hypothetical protein GLYMA_02G155300 [Glycine max]         198   2e-60
XP_019441770.1 PREDICTED: probable U6 snRNA-associated Sm-like p...   198   2e-60
EPS71391.1 hypothetical protein M569_03371, partial [Genlisea au...   198   2e-60
XP_004494370.1 PREDICTED: probable U6 snRNA-associated Sm-like p...   198   2e-60
XP_019452640.1 PREDICTED: probable U6 snRNA-associated Sm-like p...   198   2e-60
XP_019441768.1 PREDICTED: sm-like protein LSM4 isoform X1 [Lupin...   198   3e-60
KJB49937.1 hypothetical protein B456_008G146200 [Gossypium raimo...   196   3e-60
BAT95723.1 hypothetical protein VIGAN_08249900 [Vigna angularis ...   198   3e-60
KJB49935.1 hypothetical protein B456_008G146200 [Gossypium raimo...   196   5e-60
KVI03986.1 Like-Sm (LSM) domain-containing protein, partial [Cyn...   197   6e-60
KRH68173.1 hypothetical protein GLYMA_03G213600 [Glycine max]         196   7e-60
XP_011079681.1 PREDICTED: probable U6 snRNA-associated Sm-like p...   197   8e-60
KJB22526.1 hypothetical protein B456_004G052500 [Gossypium raimo...   196   8e-60
XP_002523061.1 PREDICTED: sm-like protein LSM4 [Ricinus communis...   197   9e-60
XP_012082737.1 PREDICTED: sm-like protein LSM4 [Jatropha curcas]      197   9e-60
GAV87175.1 LSM domain-containing protein [Cephalotus follicularis]    197   9e-60

>XP_019187503.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
           [Ipomoea nil] XP_019187504.1 PREDICTED: probable U6
           snRNA-associated Sm-like protein LSm4 [Ipomoea nil]
          Length = 145

 Score =  198 bits (504), Expect = 2e-60
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 92


>KRH71563.1 hypothetical protein GLYMA_02G155300 [Glycine max]
          Length = 147

 Score =  198 bits (504), Expect = 2e-60
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 92


>XP_019452641.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
           isoform X2 [Lupinus angustifolius] OIW06779.1
           hypothetical protein TanjilG_11504 [Lupinus
           angustifolius]
          Length = 148

 Score =  198 bits (504), Expect = 2e-60
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 92


>XP_006588395.1 PREDICTED: uncharacterized protein LOC100500134 isoform X1 [Glycine
           max] KHN03728.1 Putative U6 snRNA-associated Sm-like
           protein LSm4 [Glycine soja] KRH31884.1 hypothetical
           protein GLYMA_10G019100 [Glycine max]
          Length = 149

 Score =  198 bits (504), Expect = 2e-60
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 92


>KRH71562.1 hypothetical protein GLYMA_02G155300 [Glycine max]
          Length = 149

 Score =  198 bits (504), Expect = 2e-60
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 92


>XP_019441770.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
           isoform X3 [Lupinus angustifolius]
          Length = 150

 Score =  198 bits (504), Expect = 2e-60
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 92


>EPS71391.1 hypothetical protein M569_03371, partial [Genlisea aurea]
          Length = 150

 Score =  198 bits (504), Expect = 2e-60
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 3   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 62

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP
Sbjct: 63  IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 94


>XP_004494370.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cicer
           arietinum]
          Length = 150

 Score =  198 bits (504), Expect = 2e-60
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 92


>XP_019452640.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
           isoform X1 [Lupinus angustifolius]
          Length = 151

 Score =  198 bits (504), Expect = 2e-60
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 92


>XP_019441768.1 PREDICTED: sm-like protein LSM4 isoform X1 [Lupinus angustifolius]
           XP_019441769.1 PREDICTED: sm-like protein LSM4 isoform
           X2 [Lupinus angustifolius]
          Length = 152

 Score =  198 bits (504), Expect = 3e-60
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 92


>KJB49937.1 hypothetical protein B456_008G146200 [Gossypium raimondii]
          Length = 101

 Score =  196 bits (499), Expect = 3e-60
 Identities = 91/92 (98%), Positives = 91/92 (98%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRADRKPP 92


>BAT95723.1 hypothetical protein VIGAN_08249900 [Vigna angularis var.
           angularis]
          Length = 158

 Score =  198 bits (504), Expect = 3e-60
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 92


>KJB49935.1 hypothetical protein B456_008G146200 [Gossypium raimondii]
          Length = 121

 Score =  196 bits (499), Expect = 5e-60
 Identities = 91/92 (98%), Positives = 91/92 (98%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRADRKPP 92


>KVI03986.1 Like-Sm (LSM) domain-containing protein, partial [Cynara
           cardunculus var. scolymus]
          Length = 135

 Score =  197 bits (500), Expect = 6e-60
 Identities = 91/92 (98%), Positives = 92/92 (100%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSR+DRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP 92


>KRH68173.1 hypothetical protein GLYMA_03G213600 [Glycine max]
          Length = 128

 Score =  196 bits (499), Expect = 7e-60
 Identities = 91/92 (98%), Positives = 91/92 (98%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRADRKPP 92


>XP_011079681.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4
           [Sesamum indicum] XP_011079682.1 PREDICTED: probable U6
           snRNA-associated Sm-like protein LSm4 [Sesamum indicum]
          Length = 144

 Score =  197 bits (500), Expect = 8e-60
 Identities = 91/92 (98%), Positives = 92/92 (100%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSR+DRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP 92


>KJB22526.1 hypothetical protein B456_004G052500 [Gossypium raimondii]
          Length = 135

 Score =  196 bits (499), Expect = 8e-60
 Identities = 91/92 (98%), Positives = 91/92 (98%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSR DRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRADRKPP 92


>XP_002523061.1 PREDICTED: sm-like protein LSM4 [Ricinus communis] EEF39246.1 Small
           nuclear ribonucleoprotein SM D3, putative [Ricinus
           communis]
          Length = 147

 Score =  197 bits (500), Expect = 9e-60
 Identities = 91/92 (98%), Positives = 92/92 (100%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSR+DRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP 92


>XP_012082737.1 PREDICTED: sm-like protein LSM4 [Jatropha curcas]
          Length = 148

 Score =  197 bits (500), Expect = 9e-60
 Identities = 91/92 (98%), Positives = 92/92 (100%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSR+DRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP 92


>GAV87175.1 LSM domain-containing protein [Cephalotus follicularis]
          Length = 149

 Score =  197 bits (500), Expect = 9e-60
 Identities = 91/92 (98%), Positives = 92/92 (100%)
 Frame = +1

Query: 133 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 312
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 313 IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPP 408
           IRGNTIKYLRVPDEVIDKVQEETKSR+DRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPP 92


Top