BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza33_contig00005814
         (1235 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OIW03058.1 hypothetical protein TanjilG_19338 [Lupinus angustifo...   617   0.0  
XP_019457241.1 PREDICTED: pentatricopeptide repeat-containing pr...   617   0.0  
XP_016205439.1 PREDICTED: pentatricopeptide repeat-containing pr...   605   0.0  
XP_015968506.1 PREDICTED: pentatricopeptide repeat-containing pr...   601   0.0  
XP_002278166.1 PREDICTED: pentatricopeptide repeat-containing pr...   521   e-178
CAN82226.1 hypothetical protein VITISV_011875 [Vitis vinifera]        521   e-177
XP_008465161.1 PREDICTED: pentatricopeptide repeat-containing pr...   519   e-177
GAV82594.1 PPR domain-containing protein/DYW_deaminase domain-co...   516   e-177
XP_004137884.2 PREDICTED: pentatricopeptide repeat-containing pr...   515   e-176
EOX94157.1 Pentatricopeptide repeat-containing protein, putative...   514   e-176
XP_015898285.1 PREDICTED: pentatricopeptide repeat-containing pr...   513   e-175
XP_007050000.2 PREDICTED: pentatricopeptide repeat-containing pr...   512   e-175
XP_018829220.1 PREDICTED: pentatricopeptide repeat-containing pr...   508   e-173
XP_016730133.1 PREDICTED: pentatricopeptide repeat-containing pr...   505   e-172
OMP03534.1 hypothetical protein CCACVL1_02379 [Corchorus capsula...   499   e-171
XP_004301045.1 PREDICTED: pentatricopeptide repeat-containing pr...   502   e-171
XP_007227177.1 hypothetical protein PRUPE_ppa020455mg [Prunus pe...   500   e-170
XP_008360202.1 PREDICTED: pentatricopeptide repeat-containing pr...   500   e-170
XP_009353486.1 PREDICTED: pentatricopeptide repeat-containing pr...   501   e-170
XP_008222289.1 PREDICTED: pentatricopeptide repeat-containing pr...   496   e-168

>OIW03058.1 hypothetical protein TanjilG_19338 [Lupinus angustifolius]
          Length = 579

 Score =  617 bits (1592), Expect = 0.0
 Identities = 298/412 (72%), Positives = 343/412 (83%), Gaps = 1/412 (0%)
 Frame = +3

Query: 3    DGIRDARSVFEMMDCKDVGLWTLMIRGYVKK-GKFSEAFRLFRKMNSDGLKPNLVSIASV 179
            D + DAR VF+ M CKDV  WT MIR YVK  G F+EAF+LFR+MN DGLKP+ +SI+++
Sbjct: 160  DSVDDARLVFDQMPCKDVISWTSMIRAYVKNLGGFNEAFKLFRQMNLDGLKPDSLSISTI 219

Query: 180  LPACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDA 359
            LPAC R+ASH HGREIHGY+LRN + F+  VKNA+MDMYAKSGAI+ A NVFAE+NE+D 
Sbjct: 220  LPACGRIASHNHGREIHGYILRNRINFNQKVKNALMDMYAKSGAITSASNVFAEINEKDT 279

Query: 360  LSWTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFN 539
            +S T+M+LGYSL+GQGK  V LF+Q +K  +  +DDT YAA LHACSTARMVEEGKVYFN
Sbjct: 280  ISLTVMILGYSLHGQGKLAVGLFKQADKKLKVQVDDTTYAALLHACSTARMVEEGKVYFN 339

Query: 540  HIMAPTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQ 719
             I APTVAHCALKV+LLARC LF EAR  I E+K+  HPEV+RK+LEGCRIHGQY LGKQ
Sbjct: 340  CIRAPTVAHCALKVALLARCGLFHEARIFIFERKIGKHPEVVRKMLEGCRIHGQYTLGKQ 399

Query: 720  AVEQLCELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVH 899
             ++QLCELEPLNAENYV+LLNWYAG  KW MV++LRE+++D  LKPKKA TWTL R KVH
Sbjct: 400  VIDQLCELEPLNAENYVLLLNWYAGGAKWHMVEKLRETIKDMVLKPKKALTWTLLRNKVH 459

Query: 900  LFGTGDVSHPRSTKIYSALQGFMEKMRTKGLEPKWDFSLHDVDEERECTLVGHSELLALS 1079
            +FGTGDV+HPRS KIYS LQGFM +MR +G EPK DFSLHDVDEEREC  +GHSELLALS
Sbjct: 460  VFGTGDVTHPRSWKIYSQLQGFMTEMRDEGFEPKCDFSLHDVDEERECIQIGHSELLALS 519

Query: 1080 FGLISSQVGPILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            FGLISSQ GPI L KNS VC GCHDFAKF+SK  RREIILKDPN FHHFKDG
Sbjct: 520  FGLISSQAGPIRLTKNSTVCHGCHDFAKFVSKRTRREIILKDPNFFHHFKDG 571



 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 6/227 (2%)
 Frame = +3

Query: 63  WTLMIRGYVKKGKFSEAFRLFRKM-NSDGLKPNLVSIASVLPACARVASHKHGREIHGYL 239
           WTL+ R Y+  GK   A  LF KM   +    + V++A+   AC  + S +HGR++H   
Sbjct: 78  WTLLARLYIVVGKPDLAMDLFLKMVEKEKCNVDPVALATACSACGLMKSLQHGRKVHEIA 137

Query: 240 LRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMMVLGYSLN-GQGKHG 416
            +  +EF++ V N+++ MY    ++  A  VF +M  +D +SWT M+  Y  N G     
Sbjct: 138 RKCRLEFEVLVSNSLLKMYIDCDSVDDARLVFDQMPCKDVISWTSMIRAYVKNLGGFNEA 197

Query: 417 VDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNHIMAPTV-AHCALKVSLL- 590
             LFRQM  +  +  D  + +  L AC        G+    +I+   +  +  +K +L+ 
Sbjct: 198 FKLFRQMNLDGLKP-DSLSISTILPACGRIASHNHGREIHGYILRNRINFNQKVKNALMD 256

Query: 591 --ARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQAV 725
             A+      A N+  E   E     L  ++ G  +HGQ   GK AV
Sbjct: 257 MYAKSGAITSASNVFAEIN-EKDTISLTVMILGYSLHGQ---GKLAV 299


>XP_019457241.1 PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic-like [Lupinus angustifolius]
          Length = 666

 Score =  617 bits (1592), Expect = 0.0
 Identities = 298/412 (72%), Positives = 343/412 (83%), Gaps = 1/412 (0%)
 Frame = +3

Query: 3    DGIRDARSVFEMMDCKDVGLWTLMIRGYVKK-GKFSEAFRLFRKMNSDGLKPNLVSIASV 179
            D + DAR VF+ M CKDV  WT MIR YVK  G F+EAF+LFR+MN DGLKP+ +SI+++
Sbjct: 247  DSVDDARLVFDQMPCKDVISWTSMIRAYVKNLGGFNEAFKLFRQMNLDGLKPDSLSISTI 306

Query: 180  LPACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDA 359
            LPAC R+ASH HGREIHGY+LRN + F+  VKNA+MDMYAKSGAI+ A NVFAE+NE+D 
Sbjct: 307  LPACGRIASHNHGREIHGYILRNRINFNQKVKNALMDMYAKSGAITSASNVFAEINEKDT 366

Query: 360  LSWTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFN 539
            +S T+M+LGYSL+GQGK  V LF+Q +K  +  +DDT YAA LHACSTARMVEEGKVYFN
Sbjct: 367  ISLTVMILGYSLHGQGKLAVGLFKQADKKLKVQVDDTTYAALLHACSTARMVEEGKVYFN 426

Query: 540  HIMAPTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQ 719
             I APTVAHCALKV+LLARC LF EAR  I E+K+  HPEV+RK+LEGCRIHGQY LGKQ
Sbjct: 427  CIRAPTVAHCALKVALLARCGLFHEARIFIFERKIGKHPEVVRKMLEGCRIHGQYTLGKQ 486

Query: 720  AVEQLCELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVH 899
             ++QLCELEPLNAENYV+LLNWYAG  KW MV++LRE+++D  LKPKKA TWTL R KVH
Sbjct: 487  VIDQLCELEPLNAENYVLLLNWYAGGAKWHMVEKLRETIKDMVLKPKKALTWTLLRNKVH 546

Query: 900  LFGTGDVSHPRSTKIYSALQGFMEKMRTKGLEPKWDFSLHDVDEERECTLVGHSELLALS 1079
            +FGTGDV+HPRS KIYS LQGFM +MR +G EPK DFSLHDVDEEREC  +GHSELLALS
Sbjct: 547  VFGTGDVTHPRSWKIYSQLQGFMTEMRDEGFEPKCDFSLHDVDEERECIQIGHSELLALS 606

Query: 1080 FGLISSQVGPILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            FGLISSQ GPI L KNS VC GCHDFAKF+SK  RREIILKDPN FHHFKDG
Sbjct: 607  FGLISSQAGPIRLTKNSTVCHGCHDFAKFVSKRTRREIILKDPNFFHHFKDG 658



 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 6/227 (2%)
 Frame = +3

Query: 63  WTLMIRGYVKKGKFSEAFRLFRKM-NSDGLKPNLVSIASVLPACARVASHKHGREIHGYL 239
           WTL+ R Y+  GK   A  LF KM   +    + V++A+   AC  + S +HGR++H   
Sbjct: 165 WTLLARLYIVVGKPDLAMDLFLKMVEKEKCNVDPVALATACSACGLMKSLQHGRKVHEIA 224

Query: 240 LRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMMVLGYSLN-GQGKHG 416
            +  +EF++ V N+++ MY    ++  A  VF +M  +D +SWT M+  Y  N G     
Sbjct: 225 RKCRLEFEVLVSNSLLKMYIDCDSVDDARLVFDQMPCKDVISWTSMIRAYVKNLGGFNEA 284

Query: 417 VDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNHIMAPTV-AHCALKVSLL- 590
             LFRQM  +  +  D  + +  L AC        G+    +I+   +  +  +K +L+ 
Sbjct: 285 FKLFRQMNLDGLKP-DSLSISTILPACGRIASHNHGREIHGYILRNRINFNQKVKNALMD 343

Query: 591 --ARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQAV 725
             A+      A N+  E   E     L  ++ G  +HGQ   GK AV
Sbjct: 344 MYAKSGAITSASNVFAEIN-EKDTISLTVMILGYSLHGQ---GKLAV 386



 Score = 66.2 bits (160), Expect = 5e-08
 Identities = 38/167 (22%), Positives = 83/167 (49%)
 Frame = +3

Query: 27  VFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPACARVAS 206
           +F+ +   D   W  +I+ ++    F+     + +M   G+  +  ++  V+ A   + +
Sbjct: 53  LFDEIPLWDTFAWNTLIQTHLTNNDFTHVLSTYIQMLQRGVPLDKHTLPRVVRASRLMGN 112

Query: 207 HKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMMVLG 386
              G+++HG+ ++ G   D  V  A+++MY   G++  A+ VF   +  +  SWT++   
Sbjct: 113 LCIGKQVHGHAVKLGFSSDQYVVTALIEMYGHLGSLDMAQVVF-HKSSPNLFSWTLLARL 171

Query: 387 YSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGK 527
           Y + G+    +DLF +M +  + ++D  A A A  AC   + ++ G+
Sbjct: 172 YIVVGKPDLAMDLFLKMVEKEKCNVDPVALATACSACGLMKSLQHGR 218


>XP_016205439.1 PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic-like [Arachis ipaensis]
          Length = 655

 Score =  605 bits (1560), Expect = 0.0
 Identities = 293/411 (71%), Positives = 336/411 (81%)
 Frame = +3

Query: 3    DGIRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVL 182
            D + DAR VFE M CKDV  WT MI  YVK+G F+EAF+LFR+M   G KP+  SI++ L
Sbjct: 238  DSMSDARLVFEKMPCKDVISWTSMICAYVKRGGFNEAFKLFREMIRAGFKPDSHSISAFL 297

Query: 183  PACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDAL 362
            P C R+AS   GREIHGYLLRNG+  +L V NA+MDMY KSG I+ A NVFA +N++D +
Sbjct: 298  PGCGRIASLNQGREIHGYLLRNGIHSNLRVNNALMDMYVKSGCITSASNVFAGINKKDTI 357

Query: 363  SWTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNH 542
            SWT+M+LGYSL+GQGK GVDLFRQM KNS+  +DD+AYAAAL ACSTARMVEEG++YFN 
Sbjct: 358  SWTIMILGYSLHGQGKLGVDLFRQM-KNSKVLIDDSAYAAALLACSTARMVEEGRIYFNL 416

Query: 543  IMAPTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQA 722
            I  PTVAHCALKV LLA+  LF EAR  I E+ +E HPE+LRKLLEGCR+ GQY +GKQ 
Sbjct: 417  IRVPTVAHCALKVVLLAQFGLFMEARTFIEERGIEKHPEILRKLLEGCRMSGQYTMGKQI 476

Query: 723  VEQLCELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVHL 902
            VEQLCELEPLNAENYVMLLNWYAGSGKW MV ++RE++RD GLKPKKAYTWTLFR KVH+
Sbjct: 477  VEQLCELEPLNAENYVMLLNWYAGSGKWHMVQKMRETIRDMGLKPKKAYTWTLFRNKVHV 536

Query: 903  FGTGDVSHPRSTKIYSALQGFMEKMRTKGLEPKWDFSLHDVDEERECTLVGHSELLALSF 1082
            FGTGDVSHPRS +IYS LQG +EKMR KGLEP WDF LHDVDEEREC  +GHSELLALSF
Sbjct: 537  FGTGDVSHPRSERIYSELQGLIEKMRAKGLEPNWDFRLHDVDEERECIRIGHSELLALSF 596

Query: 1083 GLISSQVGPILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            GLISS  GP+ L KNSR+C GCH FAKF+SK+ RREII KDPN FHHF DG
Sbjct: 597  GLISSHAGPVRLAKNSRMCNGCHSFAKFVSKMIRREIIFKDPNFFHHFNDG 647



 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 62/251 (24%), Positives = 116/251 (46%), Gaps = 7/251 (2%)
 Frame = +3

Query: 3   DGIRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNS--DGLKPNLVSIAS 176
           D +  A+ +F+    ++   WTL+ R Y+  G  + A  LF +M +  DG+  + V++A+
Sbjct: 135 DTLPMAQKLFDNSPSRNAVCWTLLARLYLHGGNPTLALALFHQMLALDDGVAVDHVAVAT 194

Query: 177 VLPACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERD 356
              AC  + S    R +H    + G++ D+ V N+++ MY+   ++S A  VF +M  +D
Sbjct: 195 ACSACGMMRSLPQARIMHDVARKCGLDSDVLVCNSLLKMYSDCDSMSDARLVFEKMPCKD 254

Query: 357 ALSWTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYF 536
            +SWT M+  Y   G       LFR+M +   +  D  + +A L  C     + +G+   
Sbjct: 255 VISWTSMICAYVKRGGFNEAFKLFREMIRAGFKP-DSHSISAFLPGCGRIASLNQGREIH 313

Query: 537 NHIMAPTVAHCALKVS-----LLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQ 701
            +++   + H  L+V+     +  +      A N+      ++       +L G  +HGQ
Sbjct: 314 GYLLRNGI-HSNLRVNNALMDMYVKSGCITSASNVFAGINKKDTISWTIMIL-GYSLHGQ 371

Query: 702 YDLGKQAVEQL 734
             LG     Q+
Sbjct: 372 GKLGVDLFRQM 382


>XP_015968506.1 PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic-like [Arachis duranensis]
          Length = 655

 Score =  601 bits (1550), Expect = 0.0
 Identities = 291/411 (70%), Positives = 335/411 (81%)
 Frame = +3

Query: 3    DGIRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVL 182
            D + DAR VFE M CKDV  WT MI  YVK+G F+EAF+LFR+M   GLKP+  SI++ L
Sbjct: 238  DSMSDARLVFEKMPCKDVISWTSMICAYVKRGGFNEAFKLFREMIRAGLKPDSHSISAFL 297

Query: 183  PACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDAL 362
            PAC R+AS   GREIHGYLLRN +  +L V NA+MDMY KSG I+ A NVFA +N++D +
Sbjct: 298  PACGRIASLNQGREIHGYLLRNWIHSNLRVNNALMDMYVKSGCITSASNVFAGINKKDTI 357

Query: 363  SWTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNH 542
            SWT+M++GYSL+GQGK GVDLFRQM KNS+  +DD+AYAAALHAC+TARMVEEG++YFN 
Sbjct: 358  SWTIMIVGYSLHGQGKLGVDLFRQM-KNSKVLIDDSAYAAALHACNTARMVEEGRIYFNR 416

Query: 543  IMAPTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQA 722
            I  PTVAHCALKV LL +  LF EAR  I E+ +E HPE+LRKLLEGCR+ GQY +GKQ 
Sbjct: 417  IRVPTVAHCALKVVLLVKFGLFMEARTFIEERGIEKHPEILRKLLEGCRMSGQYTMGKQI 476

Query: 723  VEQLCELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVHL 902
            VEQLCELEPLNAENYVMLLNWYAGSGKW MV ++RE++RD GLKPKKAYTWTLFR KVH+
Sbjct: 477  VEQLCELEPLNAENYVMLLNWYAGSGKWQMVQKMRETIRDMGLKPKKAYTWTLFRNKVHV 536

Query: 903  FGTGDVSHPRSTKIYSALQGFMEKMRTKGLEPKWDFSLHDVDEERECTLVGHSELLALSF 1082
            FGTGDVSHPRS +IYS LQG +EKMR KGLEP WDF LHDVDEEREC  +GHSELLALSF
Sbjct: 537  FGTGDVSHPRSERIYSELQGLIEKMRAKGLEPNWDFRLHDVDEERECIRIGHSELLALSF 596

Query: 1083 GLISSQVGPILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            GLIS   GPI L KNSR+C GCH FAKF+SK+ RREII KD N FHHF DG
Sbjct: 597  GLISYHAGPIRLAKNSRMCNGCHSFAKFVSKMIRREIIFKDSNFFHHFIDG 647



 Score = 81.3 bits (199), Expect = 7e-13
 Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 8/247 (3%)
 Frame = +3

Query: 18  ARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNS--DGLKPNLVSIASVLPAC 191
           A+ +F+    ++   WTL+ R Y+  G  + A  LF +M +  DG+  + V++A+   AC
Sbjct: 140 AQKLFDNSPSRNAVCWTLLARLYLHGGNPTLALALFHQMLALDDGVAVDHVAVATACSAC 199

Query: 192 ARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWT 371
             + S    R +H    + G++ D+ V N+++ MY+   ++S A  VF +M  +D +SWT
Sbjct: 200 GMMRSLPQARIVHDVARKCGLDSDVLVCNSLLKMYSDCDSMSDARLVFEKMPCKDVISWT 259

Query: 372 MMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNHIMA 551
            M+  Y   G       LFR+M +   +  D  + +A L AC     + +G+    +++ 
Sbjct: 260 SMICAYVKRGGFNEAFKLFREMIRAGLKP-DSHSISAFLPACGRIASLNQGREIHGYLLR 318

Query: 552 PTVAHCALKVS-----LLARCALFDEARNLIRE-QKMENHPEVLRKLLEGCRIHGQYDLG 713
             + H  L+V+     +  +      A N+     K +     +  ++ G  +HGQ  LG
Sbjct: 319 NWI-HSNLRVNNALMDMYVKSGCITSASNVFAGINKKDTISWTI--MIVGYSLHGQGKLG 375

Query: 714 KQAVEQL 734
                Q+
Sbjct: 376 VDLFRQM 382


>XP_002278166.1 PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic-like [Vitis vinifera]
          Length = 662

 Score =  521 bits (1343), Expect = e-178
 Identities = 250/410 (60%), Positives = 315/410 (76%), Gaps = 1/410 (0%)
 Frame = +3

Query: 9    IRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPA 188
            I+DAR+VF+ M  KDV  WT + RGYVK G F+E  +LFR+M+ +G+KP+ ++I+S+LPA
Sbjct: 245  IKDARAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLKLFRQMSMEGVKPDSLAISSILPA 304

Query: 189  CARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSW 368
            C R A+HK G+EIH YLLRNG++ ++TV+NAV+DMY KSG I  A  +FA M +RDA+SW
Sbjct: 305  CGRGAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVKSGFIESAAKIFAGMKDRDAISW 364

Query: 369  TMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNHIM 548
            T+M+LGYSL+GQG+ GVDLFR+MEKNS   +D  AYAAALHAC+TAR+VE+G+ YFN I 
Sbjct: 365  TVMILGYSLHGQGELGVDLFRKMEKNSSVEIDQIAYAAALHACTTARLVEQGRFYFNCIT 424

Query: 549  APTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQAVE 728
            AP   H AL V+LL+R  LFDEAR  + E K+E H EVLR LL+GCRIH      K+ +E
Sbjct: 425  APKSRHYALMVALLSRVGLFDEARVFMEEHKLEGHVEVLRALLDGCRIHHNMRTAKRVIE 484

Query: 729  QLCELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVHLFG 908
            QLC+L+ LNA+NYV+L NWY+   KWDMV+ LRE++RD GLKP+KAY+W  FR K+H+FG
Sbjct: 485  QLCDLQTLNADNYVLLSNWYSSFAKWDMVNELRETIRDMGLKPRKAYSWIEFRNKIHVFG 544

Query: 909  TGDVSHPRSTKIYSALQGFMEKMRTKGLEPKWDFSLHDVDEERECTLVGHSELLALSFGL 1088
            TGDVSHPRS KIY  L   M+K+  +G     DFSLHDVDEEREC  +GHSELLA SFGL
Sbjct: 545  TGDVSHPRSEKIYWELHSLMKKIEEEGTRLNLDFSLHDVDEERECVPIGHSELLATSFGL 604

Query: 1089 ISSQVG-PILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            IS+Q G  I + KN R+C  CHD AK ISK+  REII+KDP+ FHHFKDG
Sbjct: 605  ISTQAGATIRVTKNLRMCGNCHDSAKAISKIVEREIIIKDPSCFHHFKDG 654



 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
 Frame = +3

Query: 3   DGIRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVL 182
           DG   A+ VF     ++   WTL+ R Y+ + K   A  +F++M     + + +++ + +
Sbjct: 142 DGANAAKLVFCKSARRNSVSWTLISRLYIMEDKPGLAVDMFKQMVESKSEIDPLALVTAI 201

Query: 183 PACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDAL 362
            AC  + S + GR +H    + G+E D+ V N+++ MY   G+I  A  VF  M  +D +
Sbjct: 202 VACGMLKSLQEGRYVHEIAKKCGLEADVLVSNSLLKMYIDCGSIKDARAVFDRMPSKDVI 261

Query: 363 SWTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNH 542
           SWT +  GY  NG    G+ LFRQM     +  D  A ++ L AC      ++GK    +
Sbjct: 262 SWTEIFRGYVKNGGFNEGLKLFRQMSMEGVKP-DSLAISSILPACGRGAAHKQGKEIHAY 320

Query: 543 IMA------PTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQY 704
           ++        TV +  L   +  +    + A  +    K +        ++ G  +HGQ 
Sbjct: 321 LLRNGIDLNVTVQNAVL--DMYVKSGFIESAAKIFAGMK-DRDAISWTVMILGYSLHGQG 377

Query: 705 DLG 713
           +LG
Sbjct: 378 ELG 380



 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 74/342 (21%), Positives = 144/342 (42%), Gaps = 44/342 (12%)
 Frame = +3

Query: 27   VFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPACARVAS 206
            +F+ +   +   W  +I+ ++  G        +R+M   G++P+  +I  +L A    +S
Sbjct: 49   LFDEIPVSNTFAWNNLIQTHLTNGDSDRVVSTYRQMLLRGVRPDKHTIPRILTAARHTSS 108

Query: 207  HKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMMVLG 386
               G+++HG+ L+ G+  +  V +A+++MY +    + A+ VF +   R+++SWT++   
Sbjct: 109  FSFGKQVHGHALKLGLSSESYVISALLEMYGRLDGANAAKLVFCKSARRNSVSWTLISRL 168

Query: 387  YSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNHIMAPTVAH 566
            Y +  +    VD+F+QM ++  E +D  A   A+ AC   + ++EG+ Y + I       
Sbjct: 169  YIMEDKPGLAVDMFKQMVESKSE-IDPLALVTAIVACGMLKSLQEGR-YVHEI----AKK 222

Query: 567  CALKVSLLARCAL----------------------------------------FDEARNL 626
            C L+  +L   +L                                        F+E   L
Sbjct: 223  CGLEADVLVSNSLLKMYIDCGSIKDARAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLKL 282

Query: 627  IREQKMEN-HPE--VLRKLLEGCRIHGQYDLGKQAVEQLCELE-PLNAENYVMLLNWYAG 794
             R+  ME   P+   +  +L  C     +  GK+    L      LN      +L+ Y  
Sbjct: 283  FRQMSMEGVKPDSLAISSILPACGRGAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVK 342

Query: 795  SGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVHLFGTGDV 920
            SG  +   ++   M+D     + A +WT+      L G G++
Sbjct: 343  SGFIESAAKIFAGMKD-----RDAISWTVMILGYSLHGQGEL 379


>CAN82226.1 hypothetical protein VITISV_011875 [Vitis vinifera]
          Length = 734

 Score =  521 bits (1343), Expect = e-177
 Identities = 250/410 (60%), Positives = 315/410 (76%), Gaps = 1/410 (0%)
 Frame = +3

Query: 9    IRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPA 188
            I+DAR+VF+ M  KDV  WT + RGYVK G F+E  +LFR+M+ +G+KP+ ++I+S+LPA
Sbjct: 317  IKDARAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLKLFRQMSMEGVKPDSLAISSILPA 376

Query: 189  CARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSW 368
            C R A+HK G+EIH YLLRNG++ ++TV+NAV+DMY KSG I  A  +FA M +RDA+SW
Sbjct: 377  CGRGAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVKSGFIESAAKIFAGMKDRDAISW 436

Query: 369  TMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNHIM 548
            T+M+LGYSL+GQG+ GVDLFR+MEKNS   +D  AYAAALHAC+TAR+VE+G+ YFN I 
Sbjct: 437  TVMILGYSLHGQGELGVDLFRKMEKNSSVEIDQIAYAAALHACTTARLVEQGRFYFNCIT 496

Query: 549  APTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQAVE 728
            AP   H AL V+LL+R  LFDEAR  + E K+E H EVLR LL+GCRIH      K+ +E
Sbjct: 497  APKSRHYALMVALLSRVGLFDEARVFMEEHKLEGHVEVLRALLDGCRIHHNMRTAKRVIE 556

Query: 729  QLCELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVHLFG 908
            QLC+L+ LNA+NYV+L NWY+   KWDMV+ LRE++RD GLKP+KAY+W  FR K+H+FG
Sbjct: 557  QLCDLQTLNADNYVLLSNWYSSFAKWDMVNELRETIRDMGLKPRKAYSWIEFRNKIHVFG 616

Query: 909  TGDVSHPRSTKIYSALQGFMEKMRTKGLEPKWDFSLHDVDEERECTLVGHSELLALSFGL 1088
            TGDVSHPRS KIY  L   M+K+  +G     DFSLHDVDEEREC  +GHSELLA SFGL
Sbjct: 617  TGDVSHPRSEKIYWELHSLMKKIEEEGTRLNLDFSLHDVDEERECVPIGHSELLATSFGL 676

Query: 1089 ISSQVG-PILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            IS+Q G  I + KN R+C  CHD AK ISK+  REII+KDP+ FHHFKDG
Sbjct: 677  ISTQAGATIRVTKNLRMCGNCHDSAKAISKIVEREIIIKDPSCFHHFKDG 726



 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 70/314 (22%), Positives = 139/314 (44%), Gaps = 16/314 (5%)
 Frame = +3

Query: 27   VFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPACARVAS 206
            +F+ +   +   W  +I+ ++  G        +R+M   G++P+  +I  +L A    +S
Sbjct: 144  LFDEIPVSNTFAWNNLIQTHLTNGDSGRVVSTYRQMLLRGVRPDKHTIPRILTAARHTSS 203

Query: 207  HKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMMVLG 386
               G+++HG+ L+ G+  +  V +A+++MY +      A+ VF +   R+++SWT++   
Sbjct: 204  FSFGKQVHGHALKLGLSSESYVISALLEMYGRLDGABAAKLVFCKSARRNSVSWTLISRL 263

Query: 387  YSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVY----------- 533
            Y +  +    VD+F+QM ++  E +D  A   A+ AC   + +  G++Y           
Sbjct: 264  YIMEDKPGLAVDMFKQMVESKSE-IDPLALVTAIVACGMLKSLPGGEMYIDCGSIKDARA 322

Query: 534  -FNHIMAPTVAHCALKVSLLARCALFDEARNLIREQKMEN-HPE--VLRKLLEGCRIHGQ 701
             F+ + +  V           +   F+E   L R+  ME   P+   +  +L  C     
Sbjct: 323  VFDRMPSKDVISWTEIFRGYVKNGGFNEGLKLFRQMSMEGVKPDSLAISSILPACGRGAA 382

Query: 702  YDLGKQAVEQLCELE-PLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWT 878
            +  GK+    L      LN      +L+ Y  SG  +   ++   M+D     + A +WT
Sbjct: 383  HKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVKSGFIESAAKIFAGMKD-----RDAISWT 437

Query: 879  LFRKKVHLFGTGDV 920
            +      L G G++
Sbjct: 438  VMILGYSLHGQGEL 451


>XP_008465161.1 PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic-like [Cucumis melo]
          Length = 665

 Score =  519 bits (1336), Expect = e-177
 Identities = 250/413 (60%), Positives = 314/413 (76%), Gaps = 2/413 (0%)
 Frame = +3

Query: 3    DGIRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDG-LKPNLVSIASV 179
            D I+DAR  F+ M  KDV  WT +I  YVKKG  +EAF+LFR+MN DG LKP+ ++I+S+
Sbjct: 245  DSIKDARGFFDQMPSKDVISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPLTISSI 304

Query: 180  LPACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDA 359
            LPAC R+A+HKHG+EIHGY+L+NG + +L V+NA++DMY KSG I  A   F+ M E+D 
Sbjct: 305  LPACGRMAAHKHGKEIHGYVLKNGFDENLIVQNALVDMYVKSGCIQSASKTFSMMKEKDM 364

Query: 360  LSWTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFN 539
            +SW++M LGYSL+GQGK GV LFR+MEKN + H D+  Y A LHAC+TA MV+EG  YF+
Sbjct: 365  VSWSIMTLGYSLHGQGKLGVGLFREMEKNLKMHRDEITYTAVLHACTTANMVDEGDFYFS 424

Query: 540  HIMAPTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQ 719
             I  PTVAH ALKV+LLAR    DEAR  + ++K+  HPE+LR LL+GCR H Q  LGK+
Sbjct: 425  RITKPTVAHIALKVALLARAGRLDEARTFVEKKKLNKHPEILRALLDGCRNHRQQKLGKR 484

Query: 720  AVEQLCELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVH 899
             +EQLC+LEPLN ENY++L NWYA + KWDMV+ LRE++RD GL+PKKAY+W  F  K+H
Sbjct: 485  IIEQLCDLEPLNTENYILLSNWYACNKKWDMVEELRETIRDMGLRPKKAYSWIEFCNKIH 544

Query: 900  LFGTGDVSHPRSTKIYSALQGFMEKMRTKGLEPKWDFSLHDVDEERECTLVGHSELLALS 1079
            +FGTGDVSHPRS  IY  LQ  M+KM   G +   +FSLHDVDEEREC  +GHSELLA+S
Sbjct: 545  VFGTGDVSHPRSQNIYWNLQCLMKKMEEDGSKTNPEFSLHDVDEERECVPIGHSELLAIS 604

Query: 1080 FGLISSQVG-PILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            FGLIS++ G  I + KN RVC  CH+ AKFISK+  REII+KDP VFHHFKDG
Sbjct: 605  FGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGREIIVKDPYVFHHFKDG 657



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 50/182 (27%), Positives = 88/182 (48%)
 Frame = +3

Query: 3   DGIRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVL 182
           D    A+ + +   C++   WT++ + Y+++ K S A  LF +M       + V++A+ +
Sbjct: 144 DSADTAKWLHDKSTCRNSVSWTILAKLYLREDKPSFAIDLFYQMVELADDIDSVALATAI 203

Query: 183 PACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDAL 362
            AC  +    HGR IH     +G+EF++ V N+++ MY    +I  A   F +M  +D +
Sbjct: 204 GACGALKMLHHGRNIHHLARIHGLEFNILVSNSLLKMYLDCDSIKDARGFFDQMPSKDVI 263

Query: 363 SWTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNH 542
           SWT ++  Y   G       LFRQM  + E   D    ++ L AC      + GK    +
Sbjct: 264 SWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPLTISSILPACGRMAAHKHGKEIHGY 323

Query: 543 IM 548
           ++
Sbjct: 324 VL 325



 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 38/170 (22%), Positives = 85/170 (50%)
 Frame = +3

Query: 18  ARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPACAR 197
           A  VF+ +   D   W  +I+ ++  G +     ++R+M   G++P+  ++  ++ A  +
Sbjct: 48  AHQVFDEIPIWDTFAWNNLIQTHLTNGDWGHVISIYRQMLFRGVRPDKHTLPRIICATRQ 107

Query: 198 VASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMM 377
                 G+++H    + G   DL V  +++++Y    +   A+ +  +   R+++SWT++
Sbjct: 108 YGDLPVGKQLHAQAFKLGFSSDLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTIL 167

Query: 378 VLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGK 527
              Y    +    +DLF QM + +++ +D  A A A+ AC   +M+  G+
Sbjct: 168 AKLYLREDKPSFAIDLFYQMVELADD-IDSVALATAIGACGALKMLHHGR 216


>GAV82594.1 PPR domain-containing protein/DYW_deaminase domain-containing protein
            [Cephalotus follicularis]
          Length = 582

 Score =  516 bits (1328), Expect = e-177
 Identities = 249/407 (61%), Positives = 312/407 (76%), Gaps = 1/407 (0%)
 Frame = +3

Query: 18   ARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPACAR 197
            AR +F+ M  KD+  WT +IRGYVKKG F+E+ +LFR+   DG KP+ +S++S+LPACAR
Sbjct: 168  AREIFDQMPSKDIISWTEIIRGYVKKGGFNESLKLFREKIRDGKKPDSLSLSSILPACAR 227

Query: 198  VASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMM 377
            +A+HKHG+EIHGYLLRNGV+F+LTV+NA+MDMY KSG I  A  +F +M +RD +SWTMM
Sbjct: 228  MAAHKHGKEIHGYLLRNGVDFNLTVQNAIMDMYVKSGFIESAAEIFGQMKKRDVISWTMM 287

Query: 378  VLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNHIMAPT 557
            +LG+SL+GQG+ GV+LF +M+K+S   +D + Y A LHAC TAR VEEG+ YFN I  P 
Sbjct: 288  ILGHSLHGQGELGVNLFCKMDKDSSIEIDQSMYLAVLHACCTARRVEEGRYYFNCIRTPK 347

Query: 558  VAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQAVEQLC 737
            V HCAL V+LLAR   FDEA+  I E+K E   EVLR LL+GCRIH Q  +GKQ +EQLC
Sbjct: 348  VTHCALMVALLARAGRFDEAKIFIEERKSEREAEVLRALLDGCRIHRQVKIGKQVIEQLC 407

Query: 738  ELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVHLFGTGD 917
             LEPLNAENYV+L NW+A   KW M + LRE++RD GLKPKKAY+W  F+ KVH+FGTGD
Sbjct: 408  NLEPLNAENYVLLSNWHADHAKWQMAENLRETIRDMGLKPKKAYSWIEFQNKVHVFGTGD 467

Query: 918  VSHPRSTKIYSALQGFMEKMRTKGLEPKWDFSLHDVDEERECTLVGHSELLALSFGLISS 1097
            VSHPRS +IY  LQ  M+K+  +G +P  DF LHDV+EEREC  +GHSE+LALSFGLIS+
Sbjct: 468  VSHPRSERIYWELQCLMKKIEDEGHKPNSDFFLHDVNEERECIQIGHSEMLALSFGLIST 527

Query: 1098 Q-VGPILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            Q    I + KN RVC  CHD AK ISKL +REII++D N FHHFK+G
Sbjct: 528  QSAEKIRITKNHRVCFSCHDSAKKISKLVQREIIIRDLNRFHHFKNG 574



 Score = 90.9 bits (224), Expect = 4e-16
 Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 11/259 (4%)
 Frame = +3

Query: 3   DGIRDARSVFEMMD--CKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSD---GLKPNLVS 167
           D +  A+ +F+      ++   WT++ R Y+ K K + A  LF +M  D    + P  V+
Sbjct: 59  DSVDSAKLIFDKSPSHARNSVTWTMLARLYLTKDKPNVAIHLFNQMVEDLNGSMDP--VA 116

Query: 168 IASVLPACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMN 347
           +A+ + AC  + S K G+ +H    + G+EFD+ V N+++ MY    +I  A  +F +M 
Sbjct: 117 LATAITACTMLKSLKEGKRLHMIARKCGLEFDVLVSNSLLKMYIDCSSIDIAREIFDQMP 176

Query: 348 ERDALSWTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGK 527
            +D +SWT ++ GY   G     + LFR+  ++ ++  D  + ++ L AC+     + GK
Sbjct: 177 SKDIISWTEIIRGYVKKGGFNESLKLFREKIRDGKKP-DSLSLSSILPACARMAAHKHGK 235

Query: 528 VYFNHIMAP------TVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCR 689
               +++        TV +  +   +  +    + A  +  + K  +       +L G  
Sbjct: 236 EIHGYLLRNGVDFNLTVQNAIM--DMYVKSGFIESAAEIFGQMKKRDVISWTMMIL-GHS 292

Query: 690 IHGQYDLGKQAVEQLCELE 746
           +HGQ +LG   V   C+++
Sbjct: 293 LHGQGELG---VNLFCKMD 308


>XP_004137884.2 PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic-like [Cucumis sativus]
          Length = 665

 Score =  515 bits (1327), Expect = e-176
 Identities = 248/413 (60%), Positives = 315/413 (76%), Gaps = 2/413 (0%)
 Frame = +3

Query: 3    DGIRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDG-LKPNLVSIASV 179
            D I+DAR  F+ M  KD+  WT +I  YVKKG  +EAF+LFR+MN DG LKP+  +I+S+
Sbjct: 245  DSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTISSI 304

Query: 180  LPACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDA 359
            LPAC R+A+HKHG+EIHGY+++N  + +L V+NA++DMY KSG I  A   F+ M E+D 
Sbjct: 305  LPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMKEKDM 364

Query: 360  LSWTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFN 539
            +SW++M LGYSL+GQGK GV LFR+MEKN +   D+  Y A LHAC+TA MV+EG  YF+
Sbjct: 365  VSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGDSYFS 424

Query: 540  HIMAPTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQ 719
             I  PTVAH ALKV+LLAR    DEAR  + ++K++ HPE+LR LL+GCR H Q  LGK+
Sbjct: 425  CITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQKLGKR 484

Query: 720  AVEQLCELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVH 899
             +EQLC+LEPLNAENY++L NWYA + KWDMV++LRE++RD GL+PKKAY+W  F  K+H
Sbjct: 485  IIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEFCNKIH 544

Query: 900  LFGTGDVSHPRSTKIYSALQGFMEKMRTKGLEPKWDFSLHDVDEERECTLVGHSELLALS 1079
            +FGTGDVSHPRS  IY  LQ  M++M   G +P  DFSLHDVDEEREC  +GHSELLA+S
Sbjct: 545  VFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSELLAIS 604

Query: 1080 FGLISSQVG-PILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            FGLIS++ G  I + KN RVC  CH+ AKFISK+  REII+KDP VFHHFKDG
Sbjct: 605  FGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGREIIVKDPYVFHHFKDG 657



 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 50/182 (27%), Positives = 88/182 (48%)
 Frame = +3

Query: 3   DGIRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVL 182
           D    A+ + +   C++   WT++ + Y+++ K S A  LF +M       + V++A+ +
Sbjct: 144 DSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAI 203

Query: 183 PACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDAL 362
            AC  +    HGR IH     +G+EF++ V N+++ MY    +I  A   F +M  +D +
Sbjct: 204 GACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDII 263

Query: 363 SWTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNH 542
           SWT ++  Y   G       LFRQM  + E   D    ++ L AC      + GK    +
Sbjct: 264 SWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGY 323

Query: 543 IM 548
           ++
Sbjct: 324 VV 325



 Score = 65.1 bits (157), Expect = 1e-07
 Identities = 37/170 (21%), Positives = 84/170 (49%)
 Frame = +3

Query: 18  ARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPACAR 197
           A  VF+ +   D   W  +I+ ++  G        +R+M   G++P+  ++  ++ A  +
Sbjct: 48  AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQ 107

Query: 198 VASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMM 377
               + G+++H    + G   +L V  +++++Y    +   A+ +  +   R+++SWT++
Sbjct: 108 YGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVL 167

Query: 378 VLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGK 527
              Y    +    +DLF QM + +++ +D  A A A+ AC   +M+  G+
Sbjct: 168 AKLYLREDKPSLALDLFYQMVELADD-IDAVALATAIGACGALKMLHHGR 216


>EOX94157.1 Pentatricopeptide repeat-containing protein, putative [Theobroma
            cacao]
          Length = 656

 Score =  514 bits (1325), Expect = e-176
 Identities = 251/412 (60%), Positives = 309/412 (75%), Gaps = 1/412 (0%)
 Frame = +3

Query: 3    DGIRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVL 182
            D + +ARS F+ M  KDV  WT MIRGYVKKG ++E  +LFR+M   G+KP+ ++I+S+L
Sbjct: 237  DSLEEARSFFDAMPSKDVISWTEMIRGYVKKGGYNEGLKLFRRMIRAGIKPDSLTISSIL 296

Query: 183  PACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDAL 362
            PACARV +HK G+E+H YL RNG++ +LTV+NA+MDMY KSG I  A  VF  M ERD +
Sbjct: 297  PACARVPAHKQGKELHAYLFRNGIDLNLTVQNAIMDMYVKSGFIELASTVFMCMMERDIV 356

Query: 363  SWTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNH 542
            SWT+M+LGYSL+GQG  G+DLF +MEK S   +D+  YAA LHAC TA  V+ G  YFN 
Sbjct: 357  SWTIMILGYSLHGQGGRGLDLFFEMEKESSLEIDEFTYAAVLHACVTACRVDVGMFYFNR 416

Query: 543  IMAPTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQA 722
            I APTV HCAL V+LLAR  LF+EA   I E ++ N  EVLR LL+GCRIH Q  +GKQ 
Sbjct: 417  IQAPTVIHCALMVALLARAGLFNEAWAFIEEHQIVNDAEVLRALLDGCRIHQQLKIGKQI 476

Query: 723  VEQLCELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVHL 902
            VEQLCELEPLNAENYV+L NWYA + KWDMVD+L+ ++RD GLKPK+AY+W  FR K+H+
Sbjct: 477  VEQLCELEPLNAENYVLLSNWYADNAKWDMVDKLKITIRDMGLKPKRAYSWIEFRNKIHV 536

Query: 903  FGTGDVSHPRSTKIYSALQGFMEKMRTKGLEPKWDFSLHDVDEERECTLVGHSELLALSF 1082
            FGTGDVSHPRS  +Y  LQ  M+KM  +G  P   FSLHDVDEEREC  +GHSE+LA+SF
Sbjct: 537  FGTGDVSHPRSEIVYCQLQHLMKKMEDEGRRPSSVFSLHDVDEERECIHIGHSEMLAISF 596

Query: 1083 GLISSQ-VGPILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            GLIS+Q    I + KN RVCR CHD AK ISK+  R+II+KDPN FHH +DG
Sbjct: 597  GLISTQGRETIRVTKNLRVCRSCHDTAKVISKIVERKIIIKDPNCFHHIQDG 648



 Score = 70.9 bits (172), Expect = 2e-09
 Identities = 46/174 (26%), Positives = 83/174 (47%)
 Frame = +3

Query: 6   GIRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLP 185
           G+  A+ V +     +   WT++ + ++   K   AF +F +M       + V +A+ + 
Sbjct: 137 GVDAAKWVLDNAPTTNSVAWTILAKLHLIDNKPHLAFEIFDQMLRLKADIDPVGLATAIG 196

Query: 186 ACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALS 365
           AC+ + S +  R  H      G EF L + N+++ MY    ++  A + F  M  +D +S
Sbjct: 197 ACSLLKSLQQARNAHQIARDCGFEFHLLIGNSLLKMYIDCDSLEEARSFFDAMPSKDVIS 256

Query: 366 WTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGK 527
           WT M+ GY   G    G+ LFR+M +   +  D    ++ L AC+     ++GK
Sbjct: 257 WTEMIRGYVKKGGYNEGLKLFRRMIRAGIKP-DSLTISSILPACARVPAHKQGK 309



 Score = 59.7 bits (143), Expect = 6e-06
 Identities = 31/155 (20%), Positives = 76/155 (49%)
 Frame = +3

Query: 63  WTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPACARVASHKHGREIHGYLL 242
           W  +I+ ++   +  +   ++  M   G++P+  ++  VL A     +   G+++H +  
Sbjct: 55  WNQLIQTHLSNKQLQQVLSVYHGMMLRGVRPDKHTLPRVLTASRLCTNLAFGKQVHAHAF 114

Query: 243 RNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMMVLGYSLNGQGKHGVD 422
           + G   DL V  A+M+MY +   +  A+ V       ++++WT++   + ++ +     +
Sbjct: 115 KLGFSSDLYVITALMEMYGRLHGVDAAKWVLDNAPTTNSVAWTILAKLHLIDNKPHLAFE 174

Query: 423 LFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGK 527
           +F QM +   + +D    A A+ ACS  + +++ +
Sbjct: 175 IFDQMLRLKAD-IDPVGLATAIGACSLLKSLQQAR 208


>XP_015898285.1 PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic-like [Ziziphus jujuba]
          Length = 666

 Score =  513 bits (1320), Expect = e-175
 Identities = 252/410 (61%), Positives = 312/410 (76%), Gaps = 1/410 (0%)
 Frame = +3

Query: 9    IRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPA 188
            I++AR +F+ M  KD+  WT +I  YVKKG F+E  +LFR+M  DGLKP+ +SI+S+LPA
Sbjct: 249  IQEARVIFDSMPSKDIISWTSIIHAYVKKGGFNEGLKLFRQMVKDGLKPDQLSISSILPA 308

Query: 189  CARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSW 368
            CARV ++K GREIHGYLLRNG+E ++TV NAV+DMYAKSG I+ A  +F ++  +D +SW
Sbjct: 309  CARVTANKQGREIHGYLLRNGMELNVTVFNAVIDMYAKSGCINSASKMFRQLRWKDVVSW 368

Query: 369  TMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNHIM 548
            T+M++GYSL+GQG  GVDLF +MEK+S   +D   Y A LHACSTAR+VEEGK YFN IM
Sbjct: 369  TIMIMGYSLHGQGDLGVDLFGEMEKDSSILIDQVTYGAVLHACSTARLVEEGKFYFNCIM 428

Query: 549  APTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQAVE 728
             P V H AL V+LLA   LFDEA   I++QK+E + EVLR LLEGCRIH + +LGK  VE
Sbjct: 429  TPEVTHLALMVALLAHSGLFDEAMAFIKKQKVERNAEVLRPLLEGCRIHRKKNLGKWVVE 488

Query: 729  QLCELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVHLFG 908
            QLCELE LN ENYV+L NWYA + KW MVD+L  ++ D GLK KKAY+W   R K+H+FG
Sbjct: 489  QLCELESLNPENYVLLSNWYAVNAKWGMVDKLYGTIIDLGLKAKKAYSWIELRNKIHVFG 548

Query: 909  TGDVSHPRSTKIYSALQGFMEKMRTKGLEPKWDFSLHDVDEERECTLVGHSELLALSFGL 1088
            TGDVSHPRS +IY  LQ  M+K+  +G  P  D+SLHDVDEEREC  +GHSE+LALSFGL
Sbjct: 549  TGDVSHPRSERIYWELQCLMKKIEDEGYRPSEDYSLHDVDEERECIQIGHSEMLALSFGL 608

Query: 1089 ISSQVG-PILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            IS+ +G  I + KN RVCR CHD AK ISK  +REIILKDPN FHHF+DG
Sbjct: 609  ISTHIGSTIRVTKNLRVCRNCHDCAKIISKFVQREIILKDPNRFHHFQDG 658



 Score =  102 bits (255), Expect = 6e-20
 Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 4/221 (1%)
 Frame = +3

Query: 63  WTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPACARVASHKHGREIHGYLL 242
           WTL+ + Y+++G+ S A  LF +M   G + + V++A+ + ACA + S K GR++H    
Sbjct: 166 WTLLAKLYIEEGQPSSAIHLFYQMLDFGAEIDSVALATAIVACASLKSLKQGRKVHQVAR 225

Query: 243 RNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMMVLGYSLNGQGKHGVD 422
             G+EFD+ V N+++ MY    +I  A  +F  M  +D +SWT ++  Y   G    G+ 
Sbjct: 226 NCGLEFDVLVSNSLLKMYIDCSSIQEARVIFDSMPSKDIISWTSIIHAYVKKGGFNEGLK 285

Query: 423 LFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNHI----MAPTVAHCALKVSLL 590
           LFRQM K+  +  D  + ++ L AC+     ++G+    ++    M   V      + + 
Sbjct: 286 LFRQMVKDGLKP-DQLSISSILPACARVTANKQGREIHGYLLRNGMELNVTVFNAVIDMY 344

Query: 591 ARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLG 713
           A+    + A  + R+ + ++       ++ G  +HGQ DLG
Sbjct: 345 AKSGCINSASKMFRQLRWKDVVS-WTIMIMGYSLHGQGDLG 384


>XP_007050000.2 PREDICTED: pentatricopeptide repeat-containing protein At3g12770
            [Theobroma cacao]
          Length = 656

 Score =  512 bits (1319), Expect = e-175
 Identities = 251/412 (60%), Positives = 308/412 (74%), Gaps = 1/412 (0%)
 Frame = +3

Query: 3    DGIRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVL 182
            D + +ARS F+ M  KDV  WT MIRGYVKKG ++E  +LFR+M   G+KP+ ++I+S+L
Sbjct: 237  DSLEEARSFFDAMPSKDVISWTEMIRGYVKKGGYNEGLKLFRRMIRAGIKPDSLTISSIL 296

Query: 183  PACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDAL 362
            PACARV +HK G+E+H YL RNG++ +LTV+NA+MDMY KSG I  A  VF  M ERD +
Sbjct: 297  PACARVPAHKQGKELHAYLFRNGIDLNLTVQNAIMDMYVKSGFIELASTVFMCMMERDIV 356

Query: 363  SWTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNH 542
            SWT+M+LGYSL+GQG  G+DLF +MEK S   +D+  YAA LHAC TA  V+ G  YFN 
Sbjct: 357  SWTIMILGYSLHGQGGRGLDLFFEMEKESSLEIDEFTYAAVLHACVTACRVDVGMFYFNR 416

Query: 543  IMAPTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQA 722
            I APTV HCAL V+LLAR  LF+EA   I E ++ N  EVLR LL+GCRIH Q  +GKQ 
Sbjct: 417  IQAPTVIHCALMVALLARAGLFNEAWAFIEEHQIVNDAEVLRALLDGCRIHQQLKIGKQI 476

Query: 723  VEQLCELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVHL 902
            VEQLCELEPLNA NYV+L NWYA + KWDMVD+L+ ++RD GLKPK+AY+W  FR KVH+
Sbjct: 477  VEQLCELEPLNAGNYVLLSNWYADNAKWDMVDKLKITIRDMGLKPKRAYSWIEFRNKVHV 536

Query: 903  FGTGDVSHPRSTKIYSALQGFMEKMRTKGLEPKWDFSLHDVDEERECTLVGHSELLALSF 1082
            FGTGDVSHPRS  +Y  LQ  M+KM  +G  P   FSLHDVDEEREC  +GHSE+LA+SF
Sbjct: 537  FGTGDVSHPRSEIVYCELQHLMKKMEDEGRRPSSVFSLHDVDEERECIHIGHSEMLAISF 596

Query: 1083 GLISSQ-VGPILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            GLIS+Q    I + KN RVCR CHD AK ISK+  R+II+KDPN FHH +DG
Sbjct: 597  GLISTQGRETIRVTKNLRVCRSCHDTAKVISKIVERKIIIKDPNCFHHIQDG 648



 Score = 70.9 bits (172), Expect = 2e-09
 Identities = 46/174 (26%), Positives = 83/174 (47%)
 Frame = +3

Query: 6   GIRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLP 185
           G+  A+ V +     +   WT++ + ++   K   AF +F +M       + V +A+ + 
Sbjct: 137 GVDAAKWVLDNAPTTNSVAWTILAKLHLIDNKPHLAFEIFDQMLRLKADIDPVGLATAIG 196

Query: 186 ACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALS 365
           AC+ + S +  R  H      G EF L + N+++ MY    ++  A + F  M  +D +S
Sbjct: 197 ACSLLKSLQQARNAHQIARDCGFEFHLLIGNSLLKMYIDCDSLEEARSFFDAMPSKDVIS 256

Query: 366 WTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGK 527
           WT M+ GY   G    G+ LFR+M +   +  D    ++ L AC+     ++GK
Sbjct: 257 WTEMIRGYVKKGGYNEGLKLFRRMIRAGIKP-DSLTISSILPACARVPAHKQGK 309



 Score = 59.7 bits (143), Expect = 6e-06
 Identities = 31/155 (20%), Positives = 76/155 (49%)
 Frame = +3

Query: 63  WTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPACARVASHKHGREIHGYLL 242
           W  +I+ ++   +  +   ++  M   G++P+  ++  VL A     +   G+++H +  
Sbjct: 55  WNQLIQTHLSNKQLQQVLSVYHGMMLRGVRPDKHTLPRVLTASRLCTNLAFGKQVHAHAF 114

Query: 243 RNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMMVLGYSLNGQGKHGVD 422
           + G   DL V  A+M+MY +   +  A+ V       ++++WT++   + ++ +     +
Sbjct: 115 KLGFSSDLYVITALMEMYGRLHGVDAAKWVLDNAPTTNSVAWTILAKLHLIDNKPHLAFE 174

Query: 423 LFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGK 527
           +F QM +   + +D    A A+ ACS  + +++ +
Sbjct: 175 IFDQMLRLKAD-IDPVGLATAIGACSLLKSLQQAR 208


>XP_018829220.1 PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
            mitochondrial-like [Juglans regia]
          Length = 682

 Score =  508 bits (1309), Expect = e-173
 Identities = 244/410 (59%), Positives = 309/410 (75%), Gaps = 1/410 (0%)
 Frame = +3

Query: 9    IRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPA 188
            ++ ++ +F+ M  KDV  WT +I G VKKG+F++  +LFR+M  DG KP+  + +S+LPA
Sbjct: 265  LKASQEIFDQMPSKDVISWTAIINGCVKKGEFNDGLKLFRQMIMDGFKPDPFTFSSILPA 324

Query: 189  CARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSW 368
            CAR+ +HKHGREIHGYLLRNG++ +L V+NAVMDMY KSG I  A  +F  M  +D +SW
Sbjct: 325  CARMTAHKHGREIHGYLLRNGIDLNLVVQNAVMDMYVKSGFIEYASRIFRGMKCKDVVSW 384

Query: 369  TMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNHIM 548
            T+M+LGYSL+GQG+HGV LFR +E NS    D+  YAA LHAC TA MVE+GK YF+ I 
Sbjct: 385  TVMILGYSLHGQGQHGVHLFRMIETNSSTQTDEVTYAAVLHACRTACMVEQGKFYFSCIK 444

Query: 549  APTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQAVE 728
            A    + +L V+LLAR  LFDEAR  I E K+E H EVLR LL+G R H Q   GK+ +E
Sbjct: 445  ASKAKNSSLMVALLARAGLFDEARVFIEEHKLERHAEVLRALLDGLRNHQQPVPGKRVIE 504

Query: 729  QLCELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVHLFG 908
            QLCELEPLNA+NYV+L NWYA S +WDMVD+LR+++RD GLKPKKAY+W  F+ KVH FG
Sbjct: 505  QLCELEPLNADNYVLLSNWYANSARWDMVDKLRQTIRDMGLKPKKAYSWIEFQNKVHAFG 564

Query: 909  TGDVSHPRSTKIYSALQGFMEKMRTKGLEPKWDFSLHDVDEERECTLVGHSELLALSFGL 1088
            TGDVSHPRS +I+S LQ  ++KM  +G +P  DFS HDV+EEREC  +GHSE+LA+SFGL
Sbjct: 565  TGDVSHPRSERIFSELQRLVKKMEDEGYQPNPDFSFHDVEEERECIQIGHSEMLAVSFGL 624

Query: 1089 ISSQVG-PILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            IS+Q G  I + KN RVCR CHD AK ISK+  REII+KDPN FHHF++G
Sbjct: 625  ISTQPGITIRVSKNLRVCRNCHDSAKMISKIVGREIIVKDPNCFHHFREG 674



 Score = 93.6 bits (231), Expect = 7e-17
 Identities = 49/182 (26%), Positives = 97/182 (53%)
 Frame = +3

Query: 3   DGIRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVL 182
           D +  AR +F+    ++   WT++ R Y+ + K   A   F +M   G + + V++A+ +
Sbjct: 162 DSVDTARWLFDKSPHRNSVSWTVLARLYIMENKPGLAIDTFNQMVESGAEIDSVALATAV 221

Query: 183 PACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDAL 362
            AC    S + GR++H    + G+EF++ V NA++ MY   G++  ++ +F +M  +D +
Sbjct: 222 GACGMFQSLQQGRKLHQIARKCGLEFNMVVSNALLKMYIDCGSLKASQEIFDQMPSKDVI 281

Query: 363 SWTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNH 542
           SWT ++ G    G+   G+ LFRQM  +  +  D   +++ L AC+     + G+    +
Sbjct: 282 SWTAIINGCVKKGEFNDGLKLFRQMIMDGFKP-DPFTFSSILPACARMTAHKHGREIHGY 340

Query: 543 IM 548
           ++
Sbjct: 341 LL 342



 Score = 70.9 bits (172), Expect = 2e-09
 Identities = 53/238 (22%), Positives = 107/238 (44%), Gaps = 9/238 (3%)
 Frame = +3

Query: 48  KDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDG-LKPNLVSIASVLPACARVASHKHGRE 224
           KD   W  +I+ ++  G        +R+M   G ++P+  ++  VL A  R      G++
Sbjct: 75  KDTFTWNSIIQTHLASGDLDLVISTYRQMLLRGTVRPDRRTLPRVLTASRRRGDIFIGKQ 134

Query: 225 IHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMMVLGYSLNGQ 404
           +HG+  + G   D  V +A++ MY    ++  A  +F +   R+++SWT++   Y +  +
Sbjct: 135 LHGHAFKLGFSSDHYVVSALIQMYGSLDSVDTARWLFDKSPHRNSVSWTVLARLYIMENK 194

Query: 405 GKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNHIMAPTVAHCALKVS 584
               +D F QM ++  E +D  A A A+ AC   + +++G+      +      C L+ +
Sbjct: 195 PGLAIDTFNQMVESGAE-IDSVALATAVGACGMFQSLQQGRK-----LHQIARKCGLEFN 248

Query: 585 LLARCALFD--------EARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQAVEQL 734
           ++   AL          +A   I +Q           ++ GC   G+++ G +   Q+
Sbjct: 249 MVVSNALLKMYIDCGSLKASQEIFDQMPSKDVISWTAIINGCVKKGEFNDGLKLFRQM 306


>XP_016730133.1 PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like
            [Gossypium hirsutum]
          Length = 658

 Score =  505 bits (1300), Expect = e-172
 Identities = 243/413 (58%), Positives = 309/413 (74%), Gaps = 2/413 (0%)
 Frame = +3

Query: 3    DGIRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVL 182
            D + +ARS+F+ M  +D+  WT MI+G+VK G ++EA +LFR M    +KP+ +++ S+L
Sbjct: 238  DSLEEARSLFDAMPSRDLISWTEMIQGHVKNGGYNEALKLFRLMTKARIKPDSLTVTSIL 297

Query: 183  PACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDAL 362
            PACARV +HK G+E+H YL RNG++ +LTV+NA MDMY KSG I  A NVF  M ERD +
Sbjct: 298  PACARVPAHKQGKELHAYLFRNGIDMNLTVQNAFMDMYVKSGFIELASNVFTSMVERDII 357

Query: 363  SWTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNH 542
            SWT+M+ GYSLNGQG  G+ LF +ME++S   +D+  YAA LHAC TA  V+ G  YF+H
Sbjct: 358  SWTIMISGYSLNGQGAQGLGLFLEMEQDSSLEIDEFTYAAVLHACVTACRVDVGMSYFDH 417

Query: 543  IMAPTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQA 722
            I APTV HC L VSLLAR  LF++AR  I+E ++EN  EVLR LL+GCRIH Q  +GK+ 
Sbjct: 418  IKAPTVTHCVLMVSLLARAGLFNDARTFIKEHQIENRVEVLRALLDGCRIHQQVTMGKRI 477

Query: 723  VEQLCELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVHL 902
            VEQLCELEPLNAENYV+L NWYA + KWDMVD+L+ +++D GLKPK+AY+W  FR KVH+
Sbjct: 478  VEQLCELEPLNAENYVLLSNWYAENAKWDMVDKLKTTIKDMGLKPKRAYSWIEFRNKVHV 537

Query: 903  FGTGDVSHPRSTKIYSALQGFMEKMRTKGLE-PKWDFSLHDVDEERECTLVGHSELLALS 1079
            FGTGDVSHPRS  I+  LQ  M+KM  +G + P   FS HDVDEEREC L+GH E+LA+S
Sbjct: 538  FGTGDVSHPRSEMIHWKLQHLMKKMEEEGGDRPSSIFSFHDVDEERECILIGHCEILAIS 597

Query: 1080 FGLISSQV-GPILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            FGLIS+Q    + + KN RVC  CHDF K ISK+  REII+KDPN FHHFK+G
Sbjct: 598  FGLISTQERATVRVTKNLRVCGSCHDFTKAISKIVEREIIIKDPNCFHHFKNG 650



 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 43/154 (27%), Positives = 74/154 (48%)
 Frame = +3

Query: 66  TLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPACARVASHKHGREIHGYLLR 245
           T++ + Y+   K   A  +F +M       + V++ +    C+ + S +  R++H     
Sbjct: 158 TILAKLYLVDNKPHLAIEIFNQMLRLKADIDPVALVTAAGTCSLLKSLQQARKVHQIARE 217

Query: 246 NGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMMVLGYSLNGQGKHGVDL 425
            G+EF L V N++M MY    ++  A ++F  M  RD +SWT M+ G+  NG     + L
Sbjct: 218 CGLEFHLLVSNSLMKMYIDCDSLEEARSLFDAMPSRDLISWTEMIQGHVKNGGYNEALKL 277

Query: 426 FRQMEKNSEEHLDDTAYAAALHACSTARMVEEGK 527
           FR M K +    D     + L AC+     ++GK
Sbjct: 278 FRLMTK-ARIKPDSLTVTSILPACARVPAHKQGK 310


>OMP03534.1 hypothetical protein CCACVL1_02379 [Corchorus capsularis]
          Length = 580

 Score =  499 bits (1286), Expect = e-171
 Identities = 247/413 (59%), Positives = 310/413 (75%), Gaps = 2/413 (0%)
 Frame = +3

Query: 3    DGIRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVL 182
            D I +A+SVFE M  KDV  WT MI G+VKKG ++E  +LFR+M S G+KP+  +I+S+L
Sbjct: 160  DSIEEAQSVFEAMPSKDVISWTQMIHGHVKKGGYNEGLKLFRRMISAGIKPDCFTISSIL 219

Query: 183  PACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDAL 362
            P+C R+++HK G+EIH YLLRNG++ +LTV+NAVMDMY KSG I  A N+F  M E+D +
Sbjct: 220  PSCGRISAHKQGKEIHAYLLRNGIDMNLTVQNAVMDMYVKSGFIELASNMFMCMMEKDIV 279

Query: 363  SWTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNH 542
            SWT+M+ GYSL+GQG  G+DLF +MEK+S    D+  Y A LHAC TA  V+ G  YFN 
Sbjct: 280  SWTIMMYGYSLHGQGGRGLDLFFEMEKDSSLGTDEFTYTALLHACVTACRVDVGTHYFNC 339

Query: 543  IMAPTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQA 722
            I APTV HCAL V+LLAR  LF+EA   + E +++N  EVLR LL+GCRIH Q  +GKQ 
Sbjct: 340  IRAPTVTHCALMVALLARAGLFNEAHKFMEEHQIKNDAEVLRALLDGCRIHQQVKIGKQV 399

Query: 723  VEQLCELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVHL 902
            VEQLCELEPLNA+NYV+L N YA   KWDMVD L+ ++RD GLK K+AY+W  F+ KVH+
Sbjct: 400  VEQLCELEPLNADNYVLLSNLYADCAKWDMVDNLKATIRDMGLKSKRAYSWIEFQNKVHV 459

Query: 903  FGTGDVSHPRSTKIYSALQGFMEKMRTKGL-EPKWDFSLHDVDEERECTLVGHSELLALS 1079
            FGTGDVSHPRS  IY  LQ  ++KM  +G   P   FSLHDVDEEREC+ +GHSE+LA+S
Sbjct: 460  FGTGDVSHPRSEMIYWELQRLLKKMEDEGHGRPSSVFSLHDVDEERECSPIGHSEMLAIS 519

Query: 1080 FGLISSQ-VGPILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            FGLIS+Q    I + KNSR+CRGCHD AK I+K+  REII+KDPN FHHF+DG
Sbjct: 520  FGLISTQGRETIRVTKNSRICRGCHDTAKAITKIVGREIIIKDPNCFHHFRDG 572



 Score = 66.6 bits (161), Expect = 3e-08
 Identities = 39/145 (26%), Positives = 72/145 (49%)
 Frame = +3

Query: 3   DGIRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVL 182
           D +  A+ V +     +   WT++ + Y+   K   A  +F +M       + V +A+ +
Sbjct: 59  DSVDVAKWVLDNAPSTNSVAWTILSKLYLMDNKPHLAIEIFNQMLPLKADIDPVGLATAI 118

Query: 183 PACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDAL 362
            A + + S K  +++H      G+E  + V N+++ MY    +I  A++VF  M  +D +
Sbjct: 119 GAFSHLKSLKQAKKLHQIAKECGLESHILVGNSLLKMYVGCDSIEEAQSVFEAMPSKDVI 178

Query: 363 SWTMMVLGYSLNGQGKHGVDLFRQM 437
           SWT M+ G+   G    G+ LFR+M
Sbjct: 179 SWTQMIHGHVKKGGYNEGLKLFRRM 203


>XP_004301045.1 PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 656

 Score =  502 bits (1293), Expect = e-171
 Identities = 247/410 (60%), Positives = 308/410 (75%), Gaps = 1/410 (0%)
 Frame = +3

Query: 9    IRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPA 188
            + DAR++F+    KDV  WT MIR YVKKG F+E  +LFR+M +DGLKP+ +S++SVLPA
Sbjct: 239  LEDARAIFDQRPAKDVISWTEMIRVYVKKGGFNEGLKLFRQMAADGLKPDQLSVSSVLPA 298

Query: 189  CARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSW 368
            CARV+++K G+EIHGYLLRNG+  +LTV+NA+MDMY KSG I  A  +FA +  +D +S+
Sbjct: 299  CARVSAYKQGKEIHGYLLRNGIHMNLTVQNALMDMYIKSGFIESALKIFAGLKHKDVISY 358

Query: 369  TMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNHIM 548
            T+M+LGYSL+GQG  GVDLFRQMEK     +D+  YAA LHAC  ARMV+EGK YFN I 
Sbjct: 359  TVMILGYSLHGQGPLGVDLFRQMEKELSIKIDELTYAAVLHACVAARMVKEGKCYFNCIK 418

Query: 549  APTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQAVE 728
             PTVAHCAL V+LL+   LFDEAR+ I E+++E H EVLR LL+GCRIH Q  LGK+  E
Sbjct: 419  TPTVAHCALLVALLSHSGLFDEARSFISEKRIEGHAEVLRALLDGCRIHKQLILGKRLAE 478

Query: 729  QLCELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVHLFG 908
            QLC+LEPLN +NYV+L N YA + KWD V  LR  + D GLKPK+A++W  FR K+H+FG
Sbjct: 479  QLCDLEPLNPDNYVLLSNLYADNEKWDTVFSLRGMITDMGLKPKEAFSWIEFRNKIHVFG 538

Query: 909  TGDVSHPRSTKIYSALQGFMEKMRTKGLEPKWDFSLHDVDEERECTLVGHSELLALSFGL 1088
            T D +HPRS ++Y  LQ  M+KM  + + P  D+SLHDV EEREC  +GHSE+LA+SFGL
Sbjct: 539  TRDAAHPRSERLYWELQSLMKKMEDEDIIPDLDYSLHDVYEERECIQIGHSEMLAISFGL 598

Query: 1089 ISSQVG-PILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            ISSQ G  I + KN RVCR CH  AK ISK+  REIILKDP  FHHFKDG
Sbjct: 599  ISSQTGTTIRVTKNLRVCRNCHASAKAISKMVGREIILKDPKCFHHFKDG 648



 Score = 99.4 bits (246), Expect = 8e-19
 Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 7/246 (2%)
 Frame = +3

Query: 18  ARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPACAR 197
           A+ VF+    KD+  WT++ R Y+ +GK   A  +F  M   G K + V++A+   AC  
Sbjct: 141 AKCVFDKASVKDLVSWTMIARLYIVEGKPRMALDMFDGMVESGAKMDAVALATAAGACGM 200

Query: 198 VASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMM 377
           + S   G ++H      G+EFD+ V N++  MY   G +  A  +F +   +D +SWT M
Sbjct: 201 MKSMTDGVKVHRVAKEQGLEFDVLVSNSLSKMYIDCGCLEDARAIFDQRPAKDVISWTEM 260

Query: 378 VLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNHIMAPT 557
           +  Y   G    G+ LFRQM  +  +  D  + ++ L AC+     ++GK    +++   
Sbjct: 261 IRVYVKKGGFNEGLKLFRQMAADGLKP-DQLSVSSVLPACARVSAYKQGKEIHGYLLRNG 319

Query: 558 VAHCALKV-----SLLARCALFDEARNLIREQKMENHPEVL--RKLLEGCRIHGQYDLGK 716
           + H  L V      +  +    + A  +    K   H +V+    ++ G  +HGQ  LG 
Sbjct: 320 I-HMNLTVQNALMDMYIKSGFIESALKIFAGLK---HKDVISYTVMILGYSLHGQGPLGV 375

Query: 717 QAVEQL 734
               Q+
Sbjct: 376 DLFRQM 381



 Score = 66.2 bits (160), Expect = 5e-08
 Identities = 40/169 (23%), Positives = 82/169 (48%)
 Frame = +3

Query: 18  ARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPACAR 197
           A   F+ M   D   W  +I+ ++    F  A   + +M   G++P+  ++   L A   
Sbjct: 40  AHRAFDGMSHSDTYAWNKLIQTHIANNDFHYAVSTYDQMLHRGVRPDRHTLPRALSASRL 99

Query: 198 VASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMM 377
                 G+++H + ++ G   D  V  A++++Y +  +   A+ VF + + +D +SWTM+
Sbjct: 100 SDDLSLGKQLHCHAVKFGCANDRYVIAALIELYGRLQSADTAKCVFDKASVKDLVSWTMI 159

Query: 378 VLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEG 524
              Y + G+ +  +D+F  M ++  + +D  A A A  AC   + + +G
Sbjct: 160 ARLYIVEGKPRMALDMFDGMVESGAK-MDAVALATAAGACGMMKSMTDG 207


>XP_007227177.1 hypothetical protein PRUPE_ppa020455mg [Prunus persica] ONI29728.1
            hypothetical protein PRUPE_1G211300 [Prunus persica]
          Length = 654

 Score =  500 bits (1288), Expect = e-170
 Identities = 249/410 (60%), Positives = 308/410 (75%), Gaps = 1/410 (0%)
 Frame = +3

Query: 9    IRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPA 188
            + DA SVF+ M  KDV  WT MI   VK+G F+E  +LFR+M +DG KP+ +S++SVLPA
Sbjct: 238  VDDAWSVFDQMPSKDVISWTGMIHANVKRGGFNEGLKLFRQMIADGAKPDSLSVSSVLPA 297

Query: 189  CARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSW 368
            CAR+++ K G+EIHGYL+RNG+  +LTV NA+MDMY KSG I  A  +FA + ++D +SW
Sbjct: 298  CARMSASKQGKEIHGYLIRNGIRMNLTVLNALMDMYVKSGFIESASKIFAGLKDKDVVSW 357

Query: 369  TMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNHIM 548
            T+M+LGYSL+GQG+ GV+LFRQME +S + +D+  YAA L AC  A MVEEGK YFN I 
Sbjct: 358  TVMILGYSLHGQGQLGVNLFRQMEDSSIQ-IDEFTYAAVLRACVAALMVEEGKFYFNCIK 416

Query: 549  APTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQAVE 728
             P VAH  L V+LL+R  LFD+A+N I ++K+E   EVLR LL+GCRIH Q  LGK+ +E
Sbjct: 417  TPAVAHSVLLVTLLSRYGLFDDAKNFIADKKIEGDAEVLRALLDGCRIHQQSKLGKRVIE 476

Query: 729  QLCELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVHLFG 908
            QLC+LEPLNA+NYV+L NWYA   KWDMV+ LR ++ D GLK KKAYTW   R KVH+FG
Sbjct: 477  QLCDLEPLNADNYVLLSNWYAHYAKWDMVEGLRGTIIDMGLKTKKAYTWMELRNKVHVFG 536

Query: 909  TGDVSHPRSTKIYSALQGFMEKMRTKGLEPKWDFSLHDVDEERECTLVGHSELLALSFGL 1088
            TGDVSHPRS  IY  LQG M+KM  +G     DFS HDVDEEREC  +GHSE+LA+SFGL
Sbjct: 537  TGDVSHPRSQGIYWELQGLMQKMEDEGHRRDSDFSFHDVDEERECIPIGHSEMLAISFGL 596

Query: 1089 ISSQVG-PILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            IS+Q G  I + KN RVCR CHD AK IS++  REIILKDPN FHHFKDG
Sbjct: 597  ISTQAGSTIRVTKNLRVCRNCHDSAKIISQMVGREIILKDPNCFHHFKDG 646



 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 8/247 (3%)
 Frame = +3

Query: 18  ARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPACAR 197
           A+ +F+    KD   WT++ R Y+ +GK   A  +F  M   G + + V++A+   AC  
Sbjct: 140 AKGLFDKSPVKDSVSWTMLARLYIMEGKPGMALHVFDGMVESGAQIDPVALATAAGACGM 199

Query: 198 VASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMM 377
           + S   G+++H      G+EFD+ V N ++ MY   G +  A +VF +M  +D +SWT M
Sbjct: 200 LKSVIDGKKVHRVAKERGLEFDVLVSNTLLKMYMDCGCVDDAWSVFDQMPSKDVISWTGM 259

Query: 378 VLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNHIMAPT 557
           +      G    G+ LFRQM  +  +  D  + ++ L AC+     ++GK    +++   
Sbjct: 260 IHANVKRGGFNEGLKLFRQMIADGAKP-DSLSVSSVLPACARMSASKQGKEIHGYLI--- 315

Query: 558 VAHCALKVSLLARCALFD--------EARNLIREQKMENHPEVLRKLLEGCRIHGQYDLG 713
                ++++L    AL D        E+ + I     +        ++ G  +HGQ  LG
Sbjct: 316 --RNGIRMNLTVLNALMDMYVKSGFIESASKIFAGLKDKDVVSWTVMILGYSLHGQGQLG 373

Query: 714 KQAVEQL 734
                Q+
Sbjct: 374 VNLFRQM 380



 Score = 76.3 bits (186), Expect = 3e-11
 Identities = 42/169 (24%), Positives = 84/169 (49%)
 Frame = +3

Query: 21  RSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPACARV 200
           R + E M   D   W  +I+ ++    F  A   + +M   G++P+  ++  +L A    
Sbjct: 40  RKLLEKMPHSDTFAWNKLIQTHIANAHFDNALSTYHQMLLRGVRPDRHTLPRILSASRLS 99

Query: 201 ASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMMV 380
                G+++HG+ L+ G   D  V  A++++Y +  ++  A+ +F +   +D++SWTM+ 
Sbjct: 100 VDLPLGKQLHGHALKLGCSDDRYVVAALIELYGRLHSVDAAKGLFDKSPVKDSVSWTMLA 159

Query: 381 LGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGK 527
             Y + G+    + +F  M ++  + +D  A A A  AC   + V +GK
Sbjct: 160 RLYIMEGKPGMALHVFDGMVESGAQ-IDPVALATAAGACGMLKSVIDGK 207


>XP_008360202.1 PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic-like [Malus domestica]
          Length = 655

 Score =  500 bits (1287), Expect = e-170
 Identities = 248/410 (60%), Positives = 302/410 (73%), Gaps = 1/410 (0%)
 Frame = +3

Query: 9    IRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPA 188
            + +A +VF  M  KDV  WT MI   VK+G F+E  +LFR+M  DG+KP+ +S++SVLPA
Sbjct: 238  VDEAWAVFNQMPEKDVISWTEMIHANVKRGGFNEGLKLFRQMVGDGVKPDPLSVSSVLPA 297

Query: 189  CARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSW 368
            CAR+++ KHG+E HG+LLR+G+  +LTV NA+MDMY KSG I  A  VFA    RD +SW
Sbjct: 298  CARMSAGKHGKETHGFLLRHGIRMNLTVLNALMDMYVKSGFIXSAAKVFARXKYRDLVSW 357

Query: 369  TMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNHIM 548
            T+M+ GYSL+GQGK GVDLF QMEK +   +D+  YAA LHAC  ARMVEEGK YFN I 
Sbjct: 358  TVMITGYSLHGQGKIGVDLFCQMEKETSIQIDEITYAAVLHACVAARMVEEGKFYFNCIK 417

Query: 549  APTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQAVE 728
             PTVAHCAL V+LL+R  LFDEA N I ++K+E  PEVLR LL+GCRIH Q  LG++ +E
Sbjct: 418  TPTVAHCALFVTLLSRSGLFDEANNFIADKKIEGDPEVLRALLDGCRIHRQLKLGRRVIE 477

Query: 729  QLCELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVHLFG 908
            QLC+ EPLNA+NYV+L NWYA + K DMVD +R  M D GL+P +AYTWT  R K+H+FG
Sbjct: 478  QLCDWEPLNADNYVLLANWYAENAKRDMVDEVRGMMTDMGLRPNRAYTWTEIRNKIHVFG 537

Query: 909  TGDVSHPRSTKIYSALQGFMEKMRTKGLEPKWDFSLHDVDEERECTLVGHSELLALSFGL 1088
            TGDV+HPRS  IY  LQ  M+KM   G  P  DFS HDVDEEREC   GHSE+LA+SFGL
Sbjct: 538  TGDVTHPRSQGIYWELQCLMQKMEDGGDRPDSDFSFHDVDEERECIPTGHSEMLAISFGL 597

Query: 1089 ISSQV-GPILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            IS+Q    I + KN RVCR CHD AK IS++  REIIL DPN FHHFKDG
Sbjct: 598  ISTQSRTTIRVTKNLRVCRRCHDSAKIISRMEGREIILXDPNCFHHFKDG 647



 Score = 96.3 bits (238), Expect = 8e-18
 Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 4/252 (1%)
 Frame = +3

Query: 3   DGIRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVL 182
           D    A+ +F+    KD   WT++ R Y+ +GK  +A  +F +M   G + + V++A+  
Sbjct: 135 DSADSAKGLFDKSLVKDSVSWTMLARLYIAEGKPGKAVHVFERMVESGAQIDSVAVATAA 194

Query: 183 PACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDAL 362
            AC  + S   G ++H      G+E+D+ V N ++ MY   G +  A  VF +M E+D +
Sbjct: 195 GACGMLRSLIDGTKVHRVAKERGLEYDVLVSNTLLKMYMDCGCVDEAWAVFNQMPEKDVI 254

Query: 363 SWTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGK----V 530
           SWT M+      G    G+ LFRQM  +  +  D  + ++ L AC+     + GK     
Sbjct: 255 SWTEMIHANVKRGGFNEGLKLFRQMVGDGVKP-DPLSVSSVLPACARMSAGKHGKETHGF 313

Query: 531 YFNHIMAPTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDL 710
              H +   +      + +  +      A  +    K  +       ++ G  +HGQ   
Sbjct: 314 LLRHGIRMNLTVLNALMDMYVKSGFIXSAAKVFARXKYRDLVS-WTVMITGYSLHGQ--- 369

Query: 711 GKQAVEQLCELE 746
           GK  V+  C++E
Sbjct: 370 GKIGVDLFCQME 381



 Score = 70.9 bits (172), Expect = 2e-09
 Identities = 42/166 (25%), Positives = 80/166 (48%)
 Frame = +3

Query: 27  VFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPACARVAS 206
           VF+ M   D   W   I+ ++    F  A   + +M   G++P+  ++  VL A    A 
Sbjct: 42  VFDKMPHSDTFAWNRXIQTHIANADFHHAXATYHQMLLRGVRPDRHTLPRVLSASRLSAD 101

Query: 207 HKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMMVLG 386
              G+++H +  + G   D  V  A++++Y +  +   A+ +F +   +D++SWTM+   
Sbjct: 102 LSLGKQLHAHAHKLGCSGDRYVVAALIELYGRLDSADSAKGLFDKSLVKDSVSWTMLARL 161

Query: 387 YSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEG 524
           Y   G+    V +F +M ++  + +D  A A A  AC   R + +G
Sbjct: 162 YIAEGKPGKAVHVFERMVESGAQ-IDSVAVATAAGACGMLRSLIDG 206


>XP_009353486.1 PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic-like [Pyrus x bretschneideri]
          Length = 693

 Score =  501 bits (1290), Expect = e-170
 Identities = 248/410 (60%), Positives = 304/410 (74%), Gaps = 1/410 (0%)
 Frame = +3

Query: 9    IRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPA 188
            + +A +VF  M  KDV  WT MI   VK+G F++  +LFR+M  DG+KP+ +S++SVLPA
Sbjct: 276  VDEAWAVFNQMPEKDVISWTEMIHANVKRGGFNDGLKLFRQMIGDGVKPDPLSVSSVLPA 335

Query: 189  CARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSW 368
            CAR+++ KHG+E HG+LLR+G+  + TV NA+MDMY KSG I  A  VFA +  RD +SW
Sbjct: 336  CARMSAGKHGKETHGFLLRHGIRMNPTVLNALMDMYVKSGFIESAAKVFARLKYRDLVSW 395

Query: 369  TMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNHIM 548
            T+M+ GYSL+GQGK GVDLF QMEK +   +D+  YAA LHAC  ARMVEEGK YFN I 
Sbjct: 396  TVMITGYSLHGQGKIGVDLFCQMEKETSIQIDEITYAAVLHACVAARMVEEGKFYFNCIK 455

Query: 549  APTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQAVE 728
             PTVAHCAL V+LL+R  LFDEA+N I ++K+E  PEVLR LL+GCRIH Q  LG++ +E
Sbjct: 456  TPTVAHCALFVTLLSRSGLFDEAKNFIADKKIEGDPEVLRGLLDGCRIHRQLKLGRRVIE 515

Query: 729  QLCELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVHLFG 908
            QLC+ EPLNA+NYV+L NWYA + K DMVD +R  M D GLKP +AYTWT  R K+H+FG
Sbjct: 516  QLCDWEPLNADNYVLLANWYAENAKRDMVDEVRRMMTDMGLKPNRAYTWTEIRNKIHVFG 575

Query: 909  TGDVSHPRSTKIYSALQGFMEKMRTKGLEPKWDFSLHDVDEERECTLVGHSELLALSFGL 1088
            TGDVSHPRS  IY  L+  M+KM   G  P  DFS HDVDEEREC   GHSE+LA+SFGL
Sbjct: 576  TGDVSHPRSQGIYWELRCLMQKMEDGGDRPDSDFSFHDVDEERECVPTGHSEMLAISFGL 635

Query: 1089 ISSQV-GPILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            IS+Q    I + KN RVCR CHD AK IS++  REIILKDPN FHHFKDG
Sbjct: 636  ISTQSRTTIRVTKNLRVCRRCHDSAKIISRMVGREIILKDPNCFHHFKDG 685



 Score =  100 bits (250), Expect = 3e-19
 Identities = 68/254 (26%), Positives = 119/254 (46%), Gaps = 6/254 (2%)
 Frame = +3

Query: 3   DGIRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVL 182
           D    A+ +F+    KD   WT+++R Y+ +GK  +A  +F +M   G + + V++A+  
Sbjct: 173 DSADSAKGLFDKSLVKDSVSWTMLVRLYIAEGKPGKAVHVFERMVESGAQIDSVAVATAA 232

Query: 183 PACARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDAL 362
            AC  + S   G ++H      G+E+D+ V N ++ MY   G +  A  VF +M E+D +
Sbjct: 233 GACGMLRSLIDGTKVHRVAKERGLEYDVLVSNTLLKMYMDCGCVDEAWAVFNQMPEKDVI 292

Query: 363 SWTMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNH 542
           SWT M+      G    G+ LFRQM  +  +  D  + ++ L AC+     + GK     
Sbjct: 293 SWTEMIHANVKRGGFNDGLKLFRQMIGDGVKP-DPLSVSSVLPACARMSAGKHGKETHGF 351

Query: 543 I------MAPTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQY 704
           +      M PTV +  +   +  +    + A  +    K  +       ++ G  +HGQ 
Sbjct: 352 LLRHGIRMNPTVLNALM--DMYVKSGFIESAAKVFARLKYRDLVS-WTVMITGYSLHGQ- 407

Query: 705 DLGKQAVEQLCELE 746
             GK  V+  C++E
Sbjct: 408 --GKIGVDLFCQME 419



 Score = 73.9 bits (180), Expect = 2e-10
 Identities = 43/166 (25%), Positives = 82/166 (49%)
 Frame = +3

Query: 27  VFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPACARVAS 206
           VF+ M   D   W  +I+ ++    F  A   + +M   G++P+  ++  VL A    A 
Sbjct: 80  VFDKMPHSDTFAWNRLIQTHIANADFHHALATYHQMLVRGVRPDRHTLPRVLSASRLSAD 139

Query: 207 HKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMMVLG 386
              G+++H +  + G   D  V  A++++Y +  +   A+ +F +   +D++SWTM+V  
Sbjct: 140 LSLGKQLHAHAHKLGCSGDRYVVAALIELYGRLDSADSAKGLFDKSLVKDSVSWTMLVRL 199

Query: 387 YSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEG 524
           Y   G+    V +F +M ++  + +D  A A A  AC   R + +G
Sbjct: 200 YIAEGKPGKAVHVFERMVESGAQ-IDSVAVATAAGACGMLRSLIDG 244


>XP_008222289.1 PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic-like [Prunus mume]
          Length = 654

 Score =  496 bits (1277), Expect = e-168
 Identities = 246/410 (60%), Positives = 306/410 (74%), Gaps = 1/410 (0%)
 Frame = +3

Query: 9    IRDARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPA 188
            I DARSVF+ M  KDV  WT MI   VK+G F+E  +LFR+M +DG+KP+ +S++SVLPA
Sbjct: 238  IDDARSVFDQMPSKDVISWTGMIHANVKRGGFNEGLKLFRQMIADGVKPDSLSVSSVLPA 297

Query: 189  CARVASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSW 368
            CAR+++ K G+EIHGYL+RNG+  +LTV NA+MDMY +SG I  A  +FA +  +D +SW
Sbjct: 298  CARMSASKQGKEIHGYLIRNGIRMNLTVLNALMDMYVRSGFIESASKIFARLKHKDVVSW 357

Query: 369  TMMVLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNHIM 548
            T+M+LGYSL+GQG+ GVDLFRQME +S + +D+  YAA L AC  A MV EGK YFN I 
Sbjct: 358  TVMILGYSLHGQGQLGVDLFRQMEDSSIQ-IDEITYAAVLRACVAALMVAEGKFYFNCIK 416

Query: 549  APTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVLRKLLEGCRIHGQYDLGKQAVE 728
             P VAH  L V+LL+R  LFD+A+N I ++K+E   EVLR LL+GCRIH Q  LGK+ +E
Sbjct: 417  TPAVAHSVLLVTLLSRSGLFDDAKNFIADKKIEGDAEVLRALLDGCRIHQQSKLGKRVIE 476

Query: 729  QLCELEPLNAENYVMLLNWYAGSGKWDMVDRLRESMRDKGLKPKKAYTWTLFRKKVHLFG 908
            QLC+LEPLNA+NYV+L NWYA   KWD+V+ +R ++ D GLK K+AYTW   R KVH+FG
Sbjct: 477  QLCDLEPLNADNYVLLSNWYAHYAKWDLVEEVRGTIIDMGLKTKRAYTWMELRNKVHVFG 536

Query: 909  TGDVSHPRSTKIYSALQGFMEKMRTKGLEPKWDFSLHDVDEERECTLVGHSELLALSFGL 1088
            TGDVSHPRS  IY  LQ  M+KM  +G     DFS HDVDEEREC  +GHSELLA+SFGL
Sbjct: 537  TGDVSHPRSQGIYWELQCLMQKMEDEGHRRDSDFSFHDVDEERECISIGHSELLAISFGL 596

Query: 1089 ISSQVG-PILLEKNSRVCRGCHDFAKFISKLRRREIILKDPNVFHHFKDG 1235
            IS+Q G  I + KN RVC  CHD AK IS++  REIILKDPN FHHFKDG
Sbjct: 597  ISTQAGSTIRITKNLRVCCNCHDSAKIISQMVGREIILKDPNCFHHFKDG 646



 Score =  100 bits (250), Expect = 2e-19
 Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 8/247 (3%)
 Frame = +3

Query: 18  ARSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPACAR 197
           A+ +F+    KD   WT++ R Y+ +GK S A  +F  M   G + + V++A+   AC  
Sbjct: 140 AKGLFDKSPVKDSVSWTMLARLYIMEGKPSMALHVFDGMVESGAQIDPVALATAAGACGM 199

Query: 198 VASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMM 377
           + S   G+++H      G+EFD+ V N ++ MY   G I  A +VF +M  +D +SWT M
Sbjct: 200 LKSVIDGKKVHRVAKERGLEFDVLVSNTLLKMYMDCGCIDDARSVFDQMPSKDVISWTGM 259

Query: 378 VLGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGKVYFNHI---- 545
           +      G    G+ LFRQM  +  +  D  + ++ L AC+     ++GK    ++    
Sbjct: 260 IHANVKRGGFNEGLKLFRQMIADGVKP-DSLSVSSVLPACARMSASKQGKEIHGYLIRNG 318

Query: 546 --MAPTVAHCALKVSLLARCALFDEARNLIREQKMENHPEVL--RKLLEGCRIHGQYDLG 713
             M  TV +  +   +  R    + A  +    K   H +V+    ++ G  +HGQ  LG
Sbjct: 319 IRMNLTVLNALM--DMYVRSGFIESASKIFARLK---HKDVVSWTVMILGYSLHGQGQLG 373

Query: 714 KQAVEQL 734
                Q+
Sbjct: 374 VDLFRQM 380



 Score = 78.2 bits (191), Expect = 7e-12
 Identities = 43/169 (25%), Positives = 85/169 (50%)
 Frame = +3

Query: 21  RSVFEMMDCKDVGLWTLMIRGYVKKGKFSEAFRLFRKMNSDGLKPNLVSIASVLPACARV 200
           R + E M   D   W  +I+ ++    F  A   + +M   G++P+  ++  +L A    
Sbjct: 40  RKLLEKMPHSDTFAWNNLIQTHIANAHFDNALSTYHQMLLRGVRPDRHTLPRILSASRLS 99

Query: 201 ASHKHGREIHGYLLRNGVEFDLTVKNAVMDMYAKSGAISCAENVFAEMNERDALSWTMMV 380
           A    G+++HG+ L+ G   D  V  A++++Y +  ++  A+ +F +   +D++SWTM+ 
Sbjct: 100 ADLPLGKQLHGHALKLGCSDDRYVVAALIELYGRLHSVDAAKGLFDKSPVKDSVSWTMLA 159

Query: 381 LGYSLNGQGKHGVDLFRQMEKNSEEHLDDTAYAAALHACSTARMVEEGK 527
             Y + G+    + +F  M ++  + +D  A A A  AC   + V +GK
Sbjct: 160 RLYIMEGKPSMALHVFDGMVESGAQ-IDPVALATAAGACGMLKSVIDGK 207