BLASTX nr result

ID: Glycyrrhiza33_contig00004550 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza33_contig00004550
         (658 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU13426.1 hypothetical protein TSUD_127220 [Trifolium subterran...    88   4e-17

>GAU13426.1 hypothetical protein TSUD_127220 [Trifolium subterraneum]
          Length = 334

 Score = 88.2 bits (217), Expect = 4e-17
 Identities = 60/126 (47%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
 Frame = -2

Query: 657 HTLVMIILIMNGAAGHIXXXXXXXXXXXXACVTDHTLPXXXXXXXXXXXXXXXXXXXXGQ 478
           HT+VM          HI            ACVTDHTLP                     +
Sbjct: 223 HTIVMT------GTDHILGLALLTAGLPSACVTDHTLPMAPDMSHLMIATIEGTITD--R 274

Query: 477 SLEVSHPGQGGQGGATRQVPPLFEGGAIPQVCPPGQGRDPEGVIQ---EGVVVIPNTSIR 307
            LEVSHPGQGGQGGAT +VP LFE      V PP QGRD EGVIQ   EG V+I N SIR
Sbjct: 275 FLEVSHPGQGGQGGATHEVPLLFE------VSPPCQGRDQEGVIQEALEGAVIITNISIR 328

Query: 306 DQEARV 289
           DQEA+V
Sbjct: 329 DQEAQV 334


Top