BLASTX nr result

ID: Glycyrrhiza33_contig00004377 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza33_contig00004377
         (371 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004514863.1 PREDICTED: pentatricopeptide repeat-containing pr...    70   1e-11
GAU36443.1 hypothetical protein TSUD_19780 [Trifolium subterraneum]    64   4e-10

>XP_004514863.1 PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic [Cicer arietinum]
          Length = 947

 Score = 70.5 bits (171), Expect = 1e-11
 Identities = 48/100 (48%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
 Frame = -3

Query: 276 MEAFRFSFSTSHPHLSIPPKRK--HHHSSAAKPISSSLKPPPD---SXXXXXXXNPFRRP 112
           MEAF FSF+TSH H S+  K       SS A PIS SLKPPPD   S        PFRRP
Sbjct: 1   MEAFCFSFTTSHSHFSLHSKHNPSSFSSSTATPISFSLKPPPDSNNSASPAPSPVPFRRP 60

Query: 111 SKPLXXXXXXXXXXXXXXXXXNLINPLKNP---SDSLTNK 1
           SKPL                  ++NPLKNP   S+SLTNK
Sbjct: 61  SKPL-EIKTKTTTPPPNPKPAPILNPLKNPFHSSNSLTNK 99


>GAU36443.1 hypothetical protein TSUD_19780 [Trifolium subterraneum]
          Length = 169

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 44/99 (44%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
 Frame = -3

Query: 276 MEAFRFSFSTSHPHLSIPPKRKHHHSSAAKPISSSLKPPPDSXXXXXXXNPFRRPSKPL- 100
           ME+F FS STSH H S+   +   H S++ PIS SLKPPPDS         FRRPSKPL 
Sbjct: 1   MESFSFSLSTSHSHFSLHSTK---HYSSSTPISFSLKPPPDS-NNNNNSASFRRPSKPLK 56

Query: 99  ---XXXXXXXXXXXXXXXXXNLINPLKNP---SDSLTNK 1
                                + NPLKNP   S+SLTNK
Sbjct: 57  IKTTPPPNPKPNPNPNPKQSPITNPLKNPFRSSNSLTNK 95


Top