BLASTX nr result
ID: Glycyrrhiza33_contig00004126
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza33_contig00004126
(553 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EMS55781.1 Multiple RNA-binding domain-containing protein 1 [Tri... 41 1e-12
EMT15961.1 Multiple RNA-binding domain-containing protein 1 [Aeg... 41 1e-12
XP_020197944.1 multiple RNA-binding domain-containing protein 1 ... 41 1e-12
XP_010240398.1 PREDICTED: multiple RNA-binding domain-containing... 41 2e-12
EES11404.2 hypothetical protein SORBI_006G211100 [Sorghum bicolor] 42 3e-12
XP_002448509.1 hypothetical protein SORBIDRAFT_06g028190 [Sorghu... 42 3e-12
XP_009380919.1 PREDICTED: multiple RNA-binding domain-containing... 44 4e-12
XP_010098473.1 Multiple RNA-binding domain-containing protein 1 ... 43 1e-11
XP_006413952.1 hypothetical protein EUTSA_v10024436mg [Eutrema s... 42 6e-10
XP_017235176.1 PREDICTED: multiple RNA-binding domain-containing... 49 7e-10
KZN06202.1 hypothetical protein DCAR_007039 [Daucus carota subsp... 49 7e-10
XP_017235177.1 PREDICTED: multiple RNA-binding domain-containing... 49 7e-10
XP_002299413.2 hypothetical protein POPTR_0001s11650g [Populus t... 41 1e-09
KVH88205.1 Nucleotide-binding, alpha-beta plait, partial [Cynara... 40 3e-09
XP_004493655.1 PREDICTED: multiple RNA-binding domain-containing... 56 5e-06
>EMS55781.1 Multiple RNA-binding domain-containing protein 1 [Triticum urartu]
Length = 1007
Score = 41.2 bits (95), Expect(3) = 1e-12
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = -1
Query: 439 DFVQACSIFVKNLNFKATDDNLRKHFS 359
D V++ S+FVKNLNFK TD++L++HFS
Sbjct: 779 DRVESRSVFVKNLNFKTTDESLKQHFS 805
Score = 40.8 bits (94), Expect(3) = 1e-12
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Frame = -3
Query: 218 ISRDLQGSVLDTLSNL-----------TTRSCQQ*WTSTKDSCKKYCFAATEKHLRQLFS 72
+ +DLQG+VLD + + T + ++ +STK + F ATEK LRQLFS
Sbjct: 846 VCKDLQGTVLDGHALILQLCHGRKDGQTAKKNEKDKSSTKLLVRNVAFEATEKDLRQLFS 905
Query: 71 SFGQVIT 51
FGQ+ T
Sbjct: 906 PFGQIKT 912
Score = 37.7 bits (86), Expect(3) = 1e-12
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -2
Query: 285 KWGKNVSVGFGYVEFDSMETAIN*QRFTGVC 193
K GKNVS+GFG+ EFDS+ETA T VC
Sbjct: 823 KKGKNVSMGFGFAEFDSVETA------TSVC 847
>EMT15961.1 Multiple RNA-binding domain-containing protein 1 [Aegilops
tauschii]
Length = 979
Score = 41.2 bits (95), Expect(3) = 1e-12
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = -1
Query: 439 DFVQACSIFVKNLNFKATDDNLRKHFS 359
D V++ S+FVKNLNFK TD++L++HFS
Sbjct: 751 DRVESRSVFVKNLNFKTTDESLKQHFS 777
Score = 40.8 bits (94), Expect(3) = 1e-12
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Frame = -3
Query: 218 ISRDLQGSVLDTLSNL-----------TTRSCQQ*WTSTKDSCKKYCFAATEKHLRQLFS 72
+ +DLQG+VLD + + T + ++ +STK + F ATEK LRQLFS
Sbjct: 818 VCKDLQGTVLDGHALILQLCHGRKDGQTAKKNEKDKSSTKLLVRNVAFEATEKDLRQLFS 877
Query: 71 SFGQVIT 51
FGQ+ T
Sbjct: 878 PFGQIKT 884
Score = 37.7 bits (86), Expect(3) = 1e-12
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -2
Query: 285 KWGKNVSVGFGYVEFDSMETAIN*QRFTGVC 193
K GKNVS+GFG+ EFDS+ETA T VC
Sbjct: 795 KKGKNVSMGFGFAEFDSVETA------TSVC 819
>XP_020197944.1 multiple RNA-binding domain-containing protein 1 [Aegilops tauschii
subsp. tauschii]
Length = 885
Score = 41.2 bits (95), Expect(3) = 1e-12
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = -1
Query: 439 DFVQACSIFVKNLNFKATDDNLRKHFS 359
D V++ S+FVKNLNFK TD++L++HFS
Sbjct: 657 DRVESRSVFVKNLNFKTTDESLKQHFS 683
Score = 40.8 bits (94), Expect(3) = 1e-12
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Frame = -3
Query: 218 ISRDLQGSVLDTLSNL-----------TTRSCQQ*WTSTKDSCKKYCFAATEKHLRQLFS 72
+ +DLQG+VLD + + T + ++ +STK + F ATEK LRQLFS
Sbjct: 724 VCKDLQGTVLDGHALILQLCHGRKDGQTAKKNEKDKSSTKLLVRNVAFEATEKDLRQLFS 783
Query: 71 SFGQVIT 51
FGQ+ T
Sbjct: 784 PFGQIKT 790
Score = 37.7 bits (86), Expect(3) = 1e-12
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -2
Query: 285 KWGKNVSVGFGYVEFDSMETAIN*QRFTGVC 193
K GKNVS+GFG+ EFDS+ETA T VC
Sbjct: 701 KKGKNVSMGFGFAEFDSVETA------TSVC 725
>XP_010240398.1 PREDICTED: multiple RNA-binding domain-containing protein 1
[Brachypodium distachyon] KQJ84515.1 hypothetical
protein BRADI_5g21380 [Brachypodium distachyon]
Length = 873
Score = 40.8 bits (94), Expect(3) = 2e-12
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = -1
Query: 439 DFVQACSIFVKNLNFKATDDNLRKHFS 359
D V++ S+FVKNLNFK TD++L++HFS
Sbjct: 645 DRVESRSLFVKNLNFKTTDESLKQHFS 671
Score = 39.3 bits (90), Expect(3) = 2e-12
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = -2
Query: 285 KWGKNVSVGFGYVEFDSMETAIN*QRFTGVC 193
K GKNVS+GFG+VEFDS+ETA T VC
Sbjct: 689 KKGKNVSMGFGFVEFDSIETA------TSVC 713
Score = 38.5 bits (88), Expect(3) = 2e-12
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 11/65 (16%)
Frame = -3
Query: 218 ISRDLQGSVLD-----------TLSNLTTRSCQQ*WTSTKDSCKKYCFAATEKHLRQLFS 72
+ +DLQG++LD + T + ++ +STK + F ATEK LRQLFS
Sbjct: 712 VCKDLQGTLLDGHALILQLCHGKKDSKTAKKNEKDKSSTKLLVRNVAFEATEKDLRQLFS 771
Query: 71 SFGQV 57
FGQ+
Sbjct: 772 PFGQL 776
>EES11404.2 hypothetical protein SORBI_006G211100 [Sorghum bicolor]
Length = 882
Score = 42.0 bits (97), Expect(3) = 3e-12
Identities = 17/31 (54%), Positives = 26/31 (83%)
Frame = -1
Query: 439 DFVQACSIFVKNLNFKATDDNLRKHFSGHME 347
D V++ S+FVKNLNFK TD++L++HFS ++
Sbjct: 654 DRVESRSVFVKNLNFKTTDESLKQHFSAKLK 684
Score = 39.3 bits (90), Expect(3) = 3e-12
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = -2
Query: 285 KWGKNVSVGFGYVEFDSMETAIN*QRFTGVC 193
K GK VS+GFG+VEFDS+ETA TGVC
Sbjct: 698 KKGKTVSMGFGFVEFDSVETA------TGVC 722
Score = 37.0 bits (84), Expect(3) = 3e-12
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 12/66 (18%)
Frame = -3
Query: 218 ISRDLQGSVLDTLSNLTTRSCQ------------Q*WTSTKDSCKKYCFAATEKHLRQLF 75
+ +DLQG+VLD + L + C + +STK + F ATEK LRQLF
Sbjct: 721 VCKDLQGTVLDGHA-LILQLCHGKKDGQAAKKNGKDKSSTKLLVRNVAFEATEKDLRQLF 779
Query: 74 SSFGQV 57
S FGQ+
Sbjct: 780 SPFGQI 785
>XP_002448509.1 hypothetical protein SORBIDRAFT_06g028190 [Sorghum bicolor]
Length = 620
Score = 42.0 bits (97), Expect(3) = 3e-12
Identities = 17/31 (54%), Positives = 26/31 (83%)
Frame = -1
Query: 439 DFVQACSIFVKNLNFKATDDNLRKHFSGHME 347
D V++ S+FVKNLNFK TD++L++HFS ++
Sbjct: 392 DRVESRSVFVKNLNFKTTDESLKQHFSAKLK 422
Score = 39.3 bits (90), Expect(3) = 3e-12
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = -2
Query: 285 KWGKNVSVGFGYVEFDSMETAIN*QRFTGVC 193
K GK VS+GFG+VEFDS+ETA TGVC
Sbjct: 436 KKGKTVSMGFGFVEFDSVETA------TGVC 460
Score = 37.0 bits (84), Expect(3) = 3e-12
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 12/66 (18%)
Frame = -3
Query: 218 ISRDLQGSVLDTLSNLTTRSCQ------------Q*WTSTKDSCKKYCFAATEKHLRQLF 75
+ +DLQG+VLD + L + C + +STK + F ATEK LRQLF
Sbjct: 459 VCKDLQGTVLDGHA-LILQLCHGKKDGQAAKKNGKDKSSTKLLVRNVAFEATEKDLRQLF 517
Query: 74 SSFGQV 57
S FGQ+
Sbjct: 518 SPFGQI 523
>XP_009380919.1 PREDICTED: multiple RNA-binding domain-containing protein 1 [Musa
acuminata subsp. malaccensis]
Length = 859
Score = 43.5 bits (101), Expect(3) = 4e-12
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -1
Query: 439 DFVQACSIFVKNLNFKATDDNLRKHFSGHM 350
D +++ S+FVKNLNFK TDD L+KHFS M
Sbjct: 635 DKMESRSLFVKNLNFKTTDDTLKKHFSDKM 664
Score = 37.7 bits (86), Expect(3) = 4e-12
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = -2
Query: 291 YDKWGKNVSVGFGYVEFDSMETAIN*QRFTGVC 193
+ K GK+VS+GFG++EFDS+ETA T VC
Sbjct: 677 HQKKGKDVSMGFGFIEFDSVETA------TSVC 703
Score = 36.6 bits (83), Expect(3) = 4e-12
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 11/65 (16%)
Frame = -3
Query: 218 ISRDLQGSVLD-----------TLSNLTTRSCQQ*WTSTKDSCKKYCFAATEKHLRQLFS 72
+ +DLQG+VLD + ++ ++ +ST K F ATEK L+QLFS
Sbjct: 702 VCKDLQGTVLDGHALIMQLCHSKKAGQVPKTDEKNKSSTTLMVKNVAFEATEKDLKQLFS 761
Query: 71 SFGQV 57
FGQ+
Sbjct: 762 PFGQI 766
>XP_010098473.1 Multiple RNA-binding domain-containing protein 1 [Morus notabilis]
EXB75133.1 Multiple RNA-binding domain-containing
protein 1 [Morus notabilis]
Length = 839
Score = 42.7 bits (99), Expect(3) = 1e-11
Identities = 17/31 (54%), Positives = 26/31 (83%)
Frame = -1
Query: 439 DFVQACSIFVKNLNFKATDDNLRKHFSGHME 347
D V++ ++FVKNLNFK +D++L+KHF HM+
Sbjct: 652 DSVESRTVFVKNLNFKTSDESLKKHFVEHMK 682
Score = 38.9 bits (89), Expect(3) = 1e-11
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = -2
Query: 291 YDKWGKNVSVGFGYVEFDSMETAIN 217
+ K GK VS+G+G++EFDSMETA N
Sbjct: 694 HSKHGKYVSMGYGFIEFDSMETATN 718
Score = 34.7 bits (78), Expect(3) = 1e-11
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -3
Query: 143 TSTKDSCKKYCFAATEKHLRQLFSSFGQVI 54
+STK + F AT+K LRQLFS FGQV+
Sbjct: 755 SSTKFLVRNVAFQATKKDLRQLFSPFGQVM 784
>XP_006413952.1 hypothetical protein EUTSA_v10024436mg [Eutrema salsugineum]
ESQ55405.1 hypothetical protein EUTSA_v10024436mg
[Eutrema salsugineum]
Length = 815
Score = 41.6 bits (96), Expect(3) = 6e-10
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 12/66 (18%)
Frame = -3
Query: 218 ISRDLQGSVLDTLSNLTTRSCQ------------Q*WTSTKDSCKKYCFAATEKHLRQLF 75
+ RDLQG++LD + L R C+ + TSTK K F AT+K LRQLF
Sbjct: 671 VYRDLQGTLLDEHA-LKLRFCEHKRSDQVGKGSDKDKTSTKLHVKNVAFEATQKELRQLF 729
Query: 74 SSFGQV 57
S FGQ+
Sbjct: 730 SPFGQI 735
Score = 38.1 bits (87), Expect(3) = 6e-10
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = -2
Query: 291 YDKWGKNVSVGFGYVEFDSMETAIN 217
++K GK VS G+G+VEFDS+ETA N
Sbjct: 646 HEKGGKQVSKGYGFVEFDSVETATN 670
Score = 30.4 bits (67), Expect(3) = 6e-10
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -1
Query: 439 DFVQACSIFVKNLNFKATDDNLRKHFS 359
D ++ ++V NL+FK TD+ L+KH +
Sbjct: 604 DITESNVLYVTNLSFKTTDEGLKKHLT 630
>XP_017235176.1 PREDICTED: multiple RNA-binding domain-containing protein 1 isoform
X1 [Daucus carota subsp. sativus]
Length = 825
Score = 48.9 bits (115), Expect(2) = 7e-10
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 12/109 (11%)
Frame = -3
Query: 347 KGRILSVKVNGFKC*VKQHMTNGEKMYLWGLDMLSLTPW-RLL*ISRDLQGSVLDTLSNL 171
+GRILSV+V K+H+ NG+ + + G + + +DLQGSVLD + +
Sbjct: 625 EGRILSVRV-------KKHVKNGKNVSM-GFGFVEFDSVDTATNVCKDLQGSVLDGHALI 676
Query: 170 -----------TTRSCQQ*WTSTKDSCKKYCFAATEKHLRQLFSSFGQV 57
T + Q+ +STK + F ATEK LRQLFS FGQ+
Sbjct: 677 LQRCHGKKDEQTLKKVQKDHSSTKLIVRNVAFEATEKELRQLFSPFGQI 725
Score = 41.6 bits (96), Expect(2) = 7e-10
Identities = 17/31 (54%), Positives = 27/31 (87%)
Frame = -1
Query: 439 DFVQACSIFVKNLNFKATDDNLRKHFSGHME 347
D V++ S+FVKNLNFK +D++L+K+FS H++
Sbjct: 594 DRVESRSLFVKNLNFKTSDESLKKYFSEHVK 624
>KZN06202.1 hypothetical protein DCAR_007039 [Daucus carota subsp. sativus]
Length = 792
Score = 48.9 bits (115), Expect(2) = 7e-10
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 12/109 (11%)
Frame = -3
Query: 347 KGRILSVKVNGFKC*VKQHMTNGEKMYLWGLDMLSLTPW-RLL*ISRDLQGSVLDTLSNL 171
+GRILSV+V K+H+ NG+ + + G + + +DLQGSVLD + +
Sbjct: 592 EGRILSVRV-------KKHVKNGKNVSM-GFGFVEFDSVDTATNVCKDLQGSVLDGHALI 643
Query: 170 -----------TTRSCQQ*WTSTKDSCKKYCFAATEKHLRQLFSSFGQV 57
T + Q+ +STK + F ATEK LRQLFS FGQ+
Sbjct: 644 LQRCHGKKDEQTLKKVQKDHSSTKLIVRNVAFEATEKELRQLFSPFGQI 692
Score = 41.6 bits (96), Expect(2) = 7e-10
Identities = 17/31 (54%), Positives = 27/31 (87%)
Frame = -1
Query: 439 DFVQACSIFVKNLNFKATDDNLRKHFSGHME 347
D V++ S+FVKNLNFK +D++L+K+FS H++
Sbjct: 561 DRVESRSLFVKNLNFKTSDESLKKYFSEHVK 591
>XP_017235177.1 PREDICTED: multiple RNA-binding domain-containing protein 1 isoform
X2 [Daucus carota subsp. sativus]
Length = 741
Score = 48.9 bits (115), Expect(2) = 7e-10
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 12/109 (11%)
Frame = -3
Query: 347 KGRILSVKVNGFKC*VKQHMTNGEKMYLWGLDMLSLTPW-RLL*ISRDLQGSVLDTLSNL 171
+GRILSV+V K+H+ NG+ + + G + + +DLQGSVLD + +
Sbjct: 541 EGRILSVRV-------KKHVKNGKNVSM-GFGFVEFDSVDTATNVCKDLQGSVLDGHALI 592
Query: 170 -----------TTRSCQQ*WTSTKDSCKKYCFAATEKHLRQLFSSFGQV 57
T + Q+ +STK + F ATEK LRQLFS FGQ+
Sbjct: 593 LQRCHGKKDEQTLKKVQKDHSSTKLIVRNVAFEATEKELRQLFSPFGQI 641
Score = 41.6 bits (96), Expect(2) = 7e-10
Identities = 17/31 (54%), Positives = 27/31 (87%)
Frame = -1
Query: 439 DFVQACSIFVKNLNFKATDDNLRKHFSGHME 347
D V++ S+FVKNLNFK +D++L+K+FS H++
Sbjct: 510 DRVESRSLFVKNLNFKTSDESLKKYFSEHVK 540
>XP_002299413.2 hypothetical protein POPTR_0001s11650g [Populus trichocarpa]
EEE84218.2 hypothetical protein POPTR_0001s11650g
[Populus trichocarpa]
Length = 199
Score = 41.2 bits (95), Expect(3) = 1e-09
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 11/68 (16%)
Frame = -3
Query: 218 ISRDLQGSVLDTLSNL-----------TTRSCQQ*WTSTKDSCKKYCFAATEKHLRQLFS 72
I RDLQG+VLD +++ + + +STK + F ATEK L QLFS
Sbjct: 75 ICRDLQGTVLDGHAHILQLCHAQKDEHAVKKAGKDKSSTKLLVRNVAFEATEKDLTQLFS 134
Query: 71 SFGQVITR 48
FGQV+ R
Sbjct: 135 PFGQVLER 142
Score = 38.9 bits (89), Expect(3) = 1e-09
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -1
Query: 439 DFVQACSIFVKNLNFKATDDNLRKHFSGHME 347
D +++ S+FVKNLN K D+ L+KHF HM+
Sbjct: 16 DRIKSRSLFVKNLNLKTADEILKKHFGEHMK 46
Score = 29.3 bits (64), Expect(3) = 1e-09
Identities = 13/21 (61%), Positives = 18/21 (85%), Gaps = 1/21 (4%)
Frame = -2
Query: 276 KNVSVGFGYVE-FDSMETAIN 217
+NVS+GFG++E DS+ETA N
Sbjct: 54 RNVSMGFGFIELIDSVETATN 74
>KVH88205.1 Nucleotide-binding, alpha-beta plait, partial [Cynara cardunculus
var. scolymus]
Length = 875
Score = 40.4 bits (93), Expect(3) = 3e-09
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = -1
Query: 433 VQACSIFVKNLNFKATDDNLRKHFSGHME 347
V++ S+FVKNLNF+ TD+ LRKHF H++
Sbjct: 688 VESRSLFVKNLNFRTTDEILRKHFVEHIK 716
Score = 35.4 bits (80), Expect(3) = 3e-09
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -3
Query: 143 TSTKDSCKKYCFAATEKHLRQLFSSFGQV 57
+STK + F ATEK LRQLFS FGQ+
Sbjct: 760 SSTKLIVRNVAFEATEKELRQLFSPFGQI 788
Score = 32.0 bits (71), Expect(3) = 3e-09
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -2
Query: 285 KWGKNVSVGFGYVEFDSMETAI 220
K GKNVS+GFG++EFDS + +
Sbjct: 730 KNGKNVSMGFGFLEFDSNDERV 751
>XP_004493655.1 PREDICTED: multiple RNA-binding domain-containing protein 1 [Cicer
arietinum]
Length = 848
Score = 56.2 bits (134), Expect = 5e-06
Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Frame = -1
Query: 439 DFVQACSIFVKNLNFKATDDNLRKHFSGHMEREEF*VSR*MGLSAR*SSI*QMGKKCICG 260
D ++A S+FVKNLNFK TD++L+KHFS HM+ LS + + GK G
Sbjct: 618 DRIEARSLFVKNLNFKTTDESLKKHFSEHMKEGRI-------LSVKVKKHLKNGKNVSMG 670
Query: 259 VWIC*V*LHGDCYKLA-----EIYRGLF*THSLI*QLDHVNNDGQVQKIVVKN 116
+ D + A ++ + +H+LI QL HV DG+VQK V K+
Sbjct: 671 FGF----VEFDSTETATNVCSDLQGTVLDSHALILQLCHVKTDGKVQKRVEKD 719