BLASTX nr result

ID: Glycyrrhiza32_contig00039364 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00039364
         (284 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP53960.1 Retrovirus-related Pol polyprotein from transposon TN...    45   2e-06
CAN69203.1 hypothetical protein VITISV_023039 [Vitis vinifera]         46   3e-06
CAN62702.1 hypothetical protein VITISV_005097 [Vitis vinifera]         53   4e-06
XP_017431745.1 PREDICTED: uncharacterized protein LOC108339106 [...    40   5e-06
CAN76677.1 hypothetical protein VITISV_022012 [Vitis vinifera]         47   7e-06
CAN67229.1 hypothetical protein VITISV_017766 [Vitis vinifera]         45   9e-06

>KYP53960.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 468

 Score = 44.7 bits (104), Expect(2) = 2e-06
 Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
 Frame = -3

Query: 267 SLSKYL*TKSINIVYYVQNRILIK-YSKKASYKLWQQCRPNI*YF 136
           S  K+   K++NI YY+QNRI IK   KK  Y+LW+   PNI YF
Sbjct: 344 STPKHFWEKTVNISYYIQNRIYIKPILKKTPYELWKGRAPNISYF 388



 Score = 33.9 bits (76), Expect(2) = 2e-06
 Identities = 18/38 (47%), Positives = 25/38 (65%)
 Frame = -1

Query: 116 FILNMKEQIGKVDSRVDQ*IFFLRY*KTFDAYTVYNSR 3
           FILN K+ +GK DS+ D+ I  L Y +   AY V+N+R
Sbjct: 396 FILNTKDNLGKFDSKTDESI-LLGYSERSRAYRVFNNR 432


>CAN69203.1 hypothetical protein VITISV_023039 [Vitis vinifera]
          Length = 543

 Score = 45.8 bits (107), Expect(2) = 3e-06
 Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = -3

Query: 270 NSLSKYL*TKSINIVYYVQNRILIK-YSKKASYKLWQQCRPNI*YFIVLNLMIYSQHERT 94
           N+L KY   K++N   YV NRIL++   KK  Y+LW+  +PNI YF V     +  + + 
Sbjct: 404 NNLPKYFWAKAVNTSCYVLNRILLRPILKKTPYELWKNKKPNISYFKVFGCKCFILNTKD 463

Query: 93  N 91
           N
Sbjct: 464 N 464



 Score = 32.3 bits (72), Expect(2) = 3e-06
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = -1

Query: 116 FILNMKEQIGKVDSRVDQ*IFFLRY*KTFDAYTVYNSR 3
           FILN K+ +GK D++ D  IFF  Y  +  A+ V+N R
Sbjct: 457 FILNTKDNLGKFDAKSDVGIFF-SYSTSSKAFKVFNKR 493


>CAN62702.1 hypothetical protein VITISV_005097 [Vitis vinifera]
          Length = 498

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
 Frame = -3

Query: 270 NSLSKYL*TKSINIVYYVQNRILIKYS-KKASYKLWQQCRPNI*YFIVLNL-MIYSQHER 97
           N+L KY   +++N   YV NRIL+++  KK  Y+LW+  +PNI YF V      Y +H+R
Sbjct: 434 NNLPKYFWAEAVNTSCYVLNRILLRHILKKTPYELWKNKKPNISYFKVFGCKCFYIKHQR 493

Query: 96  TNWK 85
            +WK
Sbjct: 494 QSWK 497


>XP_017431745.1 PREDICTED: uncharacterized protein LOC108339106 [Vigna angularis]
          Length = 192

 Score = 39.7 bits (91), Expect(2) = 5e-06
 Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = -3

Query: 237 INIVYYVQNRILIK-YSKKASYKLWQQCRPNI*YF 136
           +NIVYY+QN++ IK    K  Y+LW+  R NI YF
Sbjct: 20  VNIVYYIQNKVYIKAIINKTPYELWKDKRQNISYF 54



 Score = 37.7 bits (86), Expect(2) = 5e-06
 Identities = 21/38 (55%), Positives = 26/38 (68%)
 Frame = -1

Query: 116 FILNMKEQIGKVDSRVDQ*IFFLRY*KTFDAYTVYNSR 3
           FILN K+ +GK DSR D+ I  L Y +T  A+ VYNSR
Sbjct: 62  FILNTKDNLGKFDSRSDEWI-MLDYFETSRAFRVYNSR 98


>CAN76677.1 hypothetical protein VITISV_022012 [Vitis vinifera]
          Length = 889

 Score = 47.0 bits (110), Expect(2) = 7e-06
 Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
 Frame = -3

Query: 270 NSLSKYL*TKSINIVYYVQNRILIK-YSKKASYKLWQQCRPNI*YFIVLNLMIYSQHERT 94
           N+L KY   +++N  YYV NR+L++   KK  Y+LW+  +PNI YF V     +  + + 
Sbjct: 659 NNLPKYFWAEAVNTSYYVLNRVLLRPILKKTLYELWKNKKPNISYFKVFGCKCFILNTKD 718

Query: 93  N 91
           N
Sbjct: 719 N 719



 Score = 30.0 bits (66), Expect(2) = 7e-06
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = -1

Query: 116 FILNMKEQIGKVDSRVDQ*IFFLRY*KTFDAYTVYNSR 3
           FILN K+ IGK D++ +  I FL Y  +  A+ V+N R
Sbjct: 712 FILNTKDNIGKFDAKSNVGI-FLDYSTSSKAFRVFNKR 748


>CAN67229.1 hypothetical protein VITISV_017766 [Vitis vinifera]
          Length = 588

 Score = 45.4 bits (106), Expect(2) = 9e-06
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = -3

Query: 270 NSLSKYL*TKSINIVYYVQNRILIK-YSKKASYKLWQQCRPNI*YFIVLNLMIYSQHERT 94
           N+L KY   K++N   YV NRIL++   KK  Y+LW+  +PNI YF +     +  + + 
Sbjct: 358 NNLPKYFWAKAVNTSCYVLNRILLRPILKKTPYELWKNKKPNISYFKIFGCKCFILNTKD 417

Query: 93  N 91
           N
Sbjct: 418 N 418



 Score = 31.2 bits (69), Expect(2) = 9e-06
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = -1

Query: 116 FILNMKEQIGKVDSRVDQ*IFFLRY*KTFDAYTVYNSR 3
           FILN K+ +GK D++ D  I FL Y  +  A+ V+N R
Sbjct: 411 FILNTKDNLGKFDTKSDVRI-FLGYSTSSKAFRVFNKR 447


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