BLASTX nr result

ID: Glycyrrhiza32_contig00039170 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00039170
         (281 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAN80061.1 hypothetical protein VITISV_007942 [Vitis vinifera]         62   3e-09
CAN74883.1 hypothetical protein VITISV_018571 [Vitis vinifera]         57   2e-07
CAN75434.1 hypothetical protein VITISV_027911 [Vitis vinifera]         55   9e-07
OIS96452.1 putative mitochondrial protein, partial [Nicotiana at...    52   8e-06

>CAN80061.1 hypothetical protein VITISV_007942 [Vitis vinifera]
          Length = 960

 Score = 62.0 bits (149), Expect = 3e-09
 Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
 Frame = +1

Query: 94  IVFSRRKKDKKTESQEQLLHCQEPNDPQGKII--PKIIDNSETVDDSDLPIAIRKGVRSC 267
           I +SRR+K++K   Q+  L   + +DP  +    P    N ET DDSD PIA+RKGVRSC
Sbjct: 382 ITYSRRRKNQKEMEQQASLEQSQESDPSSRSSEDPSGNYNXETNDDSDFPIAVRKGVRSC 441

Query: 268 TKHP 279
           TKHP
Sbjct: 442 TKHP 445


>CAN74883.1 hypothetical protein VITISV_018571 [Vitis vinifera]
          Length = 994

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
 Frame = +1

Query: 94   IVFSRRKKDKKTESQEQLLHCQEPNDPQGKII--PKIIDNSETVDDSDLPIAIRKGVRSC 267
            I  SRR+K++K   Q+  L   +  DP  +    P    N ET DDSD PI +RKGVRSC
Sbjct: 860  ITHSRRRKNQKEMEQQASLEQTQEFDPSSRSSEDPSGNYNPETNDDSDFPIVVRKGVRSC 919

Query: 268  TKHP 279
            TKHP
Sbjct: 920  TKHP 923


>CAN75434.1 hypothetical protein VITISV_027911 [Vitis vinifera]
          Length = 1162

 Score = 55.1 bits (131), Expect = 9e-07
 Identities = 32/59 (54%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
 Frame = +1

Query: 109 RKKDKKTESQEQLLHCQEPNDPQGKII--PKIIDNSETVDDSDLPIAIRKGVRSCTKHP 279
           RK  K+ E Q  L   QE +DP  +    P    N ET DDSD PIA+RKGVRSCTKHP
Sbjct: 504 RKNQKEMEQQASLEQTQE-SDPSSRSSEDPSGNYNPETNDDSDFPIAMRKGVRSCTKHP 561


>OIS96452.1 putative mitochondrial protein, partial [Nicotiana attenuata]
          Length = 364

 Score = 52.4 bits (124), Expect = 8e-06
 Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 15/103 (14%)
 Frame = +1

Query: 16  DEENNDSLETGRMEKGASYKGIKPFD-------IVFSRRKKDKKTESQEQLLHCQE--PN 168
           D  N+++LE+  + K       K  D       IV+SRR K+++ E+     HCQE  P 
Sbjct: 135 DVLNSENLESESLRKNQDINTNKANDQAGTKELIVYSRRSKNQRHETGTTR-HCQESKPQ 193

Query: 169 D---PQGKIIPKIIDNSETVDDS---DLPIAIRKGVRSCTKHP 279
           D   PQG     + ++S    DS   DLPIA+RKGVR C K+P
Sbjct: 194 DSTNPQGNSPISLSESSPVQSDSSDLDLPIALRKGVRHCAKYP 236


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