BLASTX nr result
ID: Glycyrrhiza32_contig00038418
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza32_contig00038418
(331 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_003598635.2 RNA polymerase II fifth largest protein [Medicago... 91 6e-22
GAU39304.1 hypothetical protein TSUD_119090 [Trifolium subterran... 91 2e-20
ABD28306.1 RNA polymerase subunit, RPB5; RNA polymerase Rpb5, N-... 91 2e-20
XP_004514624.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 89 1e-19
XP_004516253.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 87 7e-19
XP_006420751.1 hypothetical protein CICLE_v10005821mg [Citrus cl... 83 5e-18
KDO42725.1 hypothetical protein CISIN_1g029683mg [Citrus sinensis] 83 7e-18
KDO42723.1 hypothetical protein CISIN_1g029683mg [Citrus sinensis] 83 1e-17
KDO42724.1 hypothetical protein CISIN_1g029683mg [Citrus sinensis] 83 2e-17
XP_006494346.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 83 2e-17
XP_006420752.1 hypothetical protein CICLE_v10005821mg [Citrus cl... 83 2e-17
XP_006420753.1 hypothetical protein CICLE_v10005821mg [Citrus cl... 83 2e-17
XP_006494923.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 84 3e-17
XP_019427747.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 83 3e-17
XP_015382032.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 83 1e-16
XP_016179475.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 81 2e-16
XP_016179474.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 81 2e-16
XP_015946743.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 79 9e-16
XP_014499453.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 77 4e-15
XP_003539245.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 75 2e-14
>XP_003598635.2 RNA polymerase II fifth largest protein [Medicago truncatula]
AES68886.2 RNA polymerase II fifth largest protein
[Medicago truncatula]
Length = 86
Score = 91.3 bits (225), Expect = 6e-22
Identities = 48/81 (59%), Positives = 59/81 (72%)
Frame = +2
Query: 89 ERGSECIVEMEISGGGGSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSLFG 268
E SEC+V I ++++IRYFECR+T+++ML DRGY V SDLT SL EFRS FG
Sbjct: 9 ETRSECLVR--ICNEESNIETIRYFECRKTLMDMLHDRGYNVSESDLTL-SLSEFRSRFG 65
Query: 269 QLPKPEALGLCVSLRSNPSIK 331
+ PKP LG+ VSLRSNPSIK
Sbjct: 66 EFPKPHTLGVSVSLRSNPSIK 86
>GAU39304.1 hypothetical protein TSUD_119090 [Trifolium subterraneum]
Length = 223
Score = 91.3 bits (225), Expect = 2e-20
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +2
Query: 98 SECIVEMEISGGGGSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSLFGQLP 277
SEC+V + GS++SIRYFECRRT++EML DRGY V SDLT T L +FRS FG+ P
Sbjct: 12 SECLVHL---CNEGSIESIRYFECRRTLMEMLYDRGYNVSESDLTLT-LFDFRSKFGEFP 67
Query: 278 KPEALGLCVSLRSNPSIK 331
K E LG+CVS RSNPS K
Sbjct: 68 KTETLGVCVSHRSNPSNK 85
>ABD28306.1 RNA polymerase subunit, RPB5; RNA polymerase Rpb5, N-terminal
[Medicago truncatula]
Length = 224
Score = 91.3 bits (225), Expect = 2e-20
Identities = 48/81 (59%), Positives = 59/81 (72%)
Frame = +2
Query: 89 ERGSECIVEMEISGGGGSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSLFG 268
E SEC+V I ++++IRYFECR+T+++ML DRGY V SDLT SL EFRS FG
Sbjct: 9 ETRSECLVR--ICNEESNIETIRYFECRKTLMDMLHDRGYNVSESDLTL-SLSEFRSRFG 65
Query: 269 QLPKPEALGLCVSLRSNPSIK 331
+ PKP LG+ VSLRSNPSIK
Sbjct: 66 EFPKPHTLGVSVSLRSNPSIK 86
>XP_004514624.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C-like [Cicer
arietinum]
Length = 219
Score = 89.0 bits (219), Expect = 1e-19
Identities = 46/83 (55%), Positives = 61/83 (73%)
Frame = +2
Query: 83 MGERGSECIVEMEISGGGGSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSL 262
M +ECIV+ + GS++SIRYFECR++++EML DRGY V S++ T SL E+R
Sbjct: 1 MATNENECIVK-NLYMNEGSIESIRYFECRKSLMEMLRDRGYNVCQSEI-TLSLNEYRQR 58
Query: 263 FGQLPKPEALGLCVSLRSNPSIK 331
FG +PKPE+LG+CVSL SNPS K
Sbjct: 59 FGAVPKPESLGVCVSLNSNPSNK 81
>XP_004516253.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C-like isoform X1
[Cicer arietinum]
Length = 219
Score = 87.0 bits (214), Expect = 7e-19
Identities = 47/83 (56%), Positives = 59/83 (71%)
Frame = +2
Query: 83 MGERGSECIVEMEISGGGGSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSL 262
M +ECIV+ + GSV+SIRYFECR+T++EML DR Y V S++ T SL E+R
Sbjct: 1 MATNENECIVK-NLYMNEGSVESIRYFECRKTLMEMLRDRWYNVCQSEI-TLSLNEYRQR 58
Query: 263 FGQLPKPEALGLCVSLRSNPSIK 331
FG +PKPE LG+CVSL SNPS K
Sbjct: 59 FGAVPKPETLGVCVSLTSNPSNK 81
>XP_006420751.1 hypothetical protein CICLE_v10005821mg [Citrus clementina]
ESR33991.1 hypothetical protein CICLE_v10005821mg
[Citrus clementina]
Length = 155
Score = 83.2 bits (204), Expect = 5e-18
Identities = 47/83 (56%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +2
Query: 86 GERGSECIVEME-ISGGGGSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSL 262
G G ECI + GGGS++S RY+ RRTVL+ML+DRGYAVP S+L T SL EFR
Sbjct: 5 GGGGGECITRSSHVMEGGGSLESYRYYLSRRTVLQMLNDRGYAVPNSEL-TRSLTEFRFT 63
Query: 263 FGQLPKPEALGLCVSLRSNPSIK 331
FG E+L LC+ LRSNPS K
Sbjct: 64 FGDKSDLESLRLCLPLRSNPSKK 86
>KDO42725.1 hypothetical protein CISIN_1g029683mg [Citrus sinensis]
Length = 154
Score = 82.8 bits (203), Expect = 7e-18
Identities = 47/80 (58%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +2
Query: 95 GSECIVEME-ISGGGGSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSLFGQ 271
G ECI + GGGS++S RYF RRTVL+ML+DRGYAVP S+L T SL EFR FG
Sbjct: 7 GGECITRSSHVMEGGGSLESYRYFLSRRTVLQMLNDRGYAVPNSEL-TRSLTEFRFTFGD 65
Query: 272 LPKPEALGLCVSLRSNPSIK 331
E+L LC+ LRSNPS K
Sbjct: 66 KCDLESLRLCLPLRSNPSKK 85
>KDO42723.1 hypothetical protein CISIN_1g029683mg [Citrus sinensis]
Length = 179
Score = 82.8 bits (203), Expect = 1e-17
Identities = 47/80 (58%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +2
Query: 95 GSECIVEME-ISGGGGSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSLFGQ 271
G ECI + GGGS++S RYF RRTVL+ML+DRGYAVP S+L T SL EFR FG
Sbjct: 7 GGECITRSSHVMEGGGSLESYRYFLSRRTVLQMLNDRGYAVPNSEL-TRSLTEFRFTFGD 65
Query: 272 LPKPEALGLCVSLRSNPSIK 331
E+L LC+ LRSNPS K
Sbjct: 66 KCDLESLRLCLPLRSNPSKK 85
>KDO42724.1 hypothetical protein CISIN_1g029683mg [Citrus sinensis]
Length = 189
Score = 82.8 bits (203), Expect = 2e-17
Identities = 47/80 (58%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +2
Query: 95 GSECIVEME-ISGGGGSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSLFGQ 271
G ECI + GGGS++S RYF RRTVL+ML+DRGYAVP S+L T SL EFR FG
Sbjct: 7 GGECITRSSHVMEGGGSLESYRYFLSRRTVLQMLNDRGYAVPNSEL-TRSLTEFRFTFGD 65
Query: 272 LPKPEALGLCVSLRSNPSIK 331
E+L LC+ LRSNPS K
Sbjct: 66 KCDLESLRLCLPLRSNPSKK 85
>XP_006494346.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C isoform X1
[Citrus sinensis] XP_015381549.1 PREDICTED: DNA-directed
RNA polymerase V subunit 5C isoform X2 [Citrus sinensis]
Length = 189
Score = 82.8 bits (203), Expect = 2e-17
Identities = 47/80 (58%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +2
Query: 95 GSECIVEME-ISGGGGSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSLFGQ 271
G ECI + GGGS++S RYF RRTVL+ML+DRGYAVP S+L T SL EFR FG
Sbjct: 7 GGECITRSSHVMEGGGSLESYRYFLSRRTVLQMLNDRGYAVPNSEL-TRSLTEFRFTFGD 65
Query: 272 LPKPEALGLCVSLRSNPSIK 331
E+L LC+ LRSNPS K
Sbjct: 66 KCDLESLRLCLPLRSNPSKK 85
>XP_006420752.1 hypothetical protein CICLE_v10005821mg [Citrus clementina]
ESR33992.1 hypothetical protein CICLE_v10005821mg
[Citrus clementina]
Length = 209
Score = 83.2 bits (204), Expect = 2e-17
Identities = 47/83 (56%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +2
Query: 86 GERGSECIVEME-ISGGGGSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSL 262
G G ECI + GGGS++S RY+ RRTVL+ML+DRGYAVP S+L T SL EFR
Sbjct: 5 GGGGGECITRSSHVMEGGGSLESYRYYLSRRTVLQMLNDRGYAVPNSEL-TRSLTEFRFT 63
Query: 263 FGQLPKPEALGLCVSLRSNPSIK 331
FG E+L LC+ LRSNPS K
Sbjct: 64 FGDKSDLESLRLCLPLRSNPSKK 86
>XP_006420753.1 hypothetical protein CICLE_v10005821mg [Citrus clementina]
ESR33993.1 hypothetical protein CICLE_v10005821mg
[Citrus clementina]
Length = 224
Score = 83.2 bits (204), Expect = 2e-17
Identities = 47/83 (56%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +2
Query: 86 GERGSECIVEME-ISGGGGSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSL 262
G G ECI + GGGS++S RY+ RRTVL+ML+DRGYAVP S+L T SL EFR
Sbjct: 5 GGGGGECITRSSHVMEGGGSLESYRYYLSRRTVLQMLNDRGYAVPNSEL-TRSLTEFRFT 63
Query: 263 FGQLPKPEALGLCVSLRSNPSIK 331
FG E+L LC+ LRSNPS K
Sbjct: 64 FGDKSDLESLRLCLPLRSNPSKK 86
>XP_006494923.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C-like [Citrus
sinensis]
Length = 252
Score = 83.6 bits (205), Expect = 3e-17
Identities = 47/80 (58%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +2
Query: 95 GSECIVEME-ISGGGGSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSLFGQ 271
G ECI + GGGS++S RYF RRTVL+ML+DRGYAVP S+L T SL EFR FG
Sbjct: 7 GGECITRSSHVMEGGGSLESYRYFLSRRTVLQMLNDRGYAVPNSEL-TRSLTEFRFTFGD 65
Query: 272 LPKPEALGLCVSLRSNPSIK 331
E+L LC+ LRSNPS K
Sbjct: 66 KSDLESLRLCLPLRSNPSKK 85
>XP_019427747.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C [Lupinus
angustifolius] OIW16898.1 hypothetical protein
TanjilG_01763 [Lupinus angustifolius]
Length = 223
Score = 82.8 bits (203), Expect = 3e-17
Identities = 49/82 (59%), Positives = 58/82 (70%)
Frame = +2
Query: 86 GERGSECIVEMEISGGGGSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSLF 265
G+R S C+V S GSV+S RYF RRTVLEML DRGY VP S+L T SLPEFRS+F
Sbjct: 8 GDR-SNCVV---CSSDAGSVESSRYFHSRRTVLEMLRDRGYDVPDSEL-TRSLPEFRSIF 62
Query: 266 GQLPKPEALGLCVSLRSNPSIK 331
G+ P E+L + VSL S+PS K
Sbjct: 63 GEKPNHESLTIRVSLLSDPSNK 84
>XP_015382032.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C-like [Citrus
sinensis]
Length = 312
Score = 82.8 bits (203), Expect = 1e-16
Identities = 47/80 (58%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +2
Query: 95 GSECIVEME-ISGGGGSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSLFGQ 271
G ECI + GGGS++S RYF RRTVL+ML+DRGYAVP S+L T SL EFR FG
Sbjct: 7 GGECITRSSHVMEGGGSLESYRYFLSRRTVLQMLNDRGYAVPNSEL-TRSLTEFRFTFGD 65
Query: 272 LPKPEALGLCVSLRSNPSIK 331
E+L LC+ LRSNPS K
Sbjct: 66 KCDLESLRLCLPLRSNPSKK 85
>XP_016179475.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C isoform X2
[Arachis ipaensis]
Length = 231
Score = 80.9 bits (198), Expect = 2e-16
Identities = 45/75 (60%), Positives = 52/75 (69%)
Frame = +2
Query: 101 ECIVEMEISGGGGSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSLFGQLPK 280
ECI G+V+S RYF RRTVLEML DRGY VP S+L T SL EFRSL+GQ+P
Sbjct: 29 ECITAFS---DNGTVESSRYFHARRTVLEMLRDRGYDVPDSEL-TRSLAEFRSLYGQIPD 84
Query: 281 PEALGLCVSLRSNPS 325
E L + VSLRS+PS
Sbjct: 85 AETLRISVSLRSDPS 99
>XP_016179474.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 5B isoform
X1 [Arachis ipaensis]
Length = 241
Score = 80.9 bits (198), Expect = 2e-16
Identities = 45/75 (60%), Positives = 52/75 (69%)
Frame = +2
Query: 101 ECIVEMEISGGGGSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSLFGQLPK 280
ECI G+V+S RYF RRTVLEML DRGY VP S+L T SL EFRSL+GQ+P
Sbjct: 29 ECITAFS---DNGTVESSRYFHARRTVLEMLRDRGYDVPDSEL-TRSLAEFRSLYGQIPD 84
Query: 281 PEALGLCVSLRSNPS 325
E L + VSLRS+PS
Sbjct: 85 AETLRISVSLRSDPS 99
>XP_015946743.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C [Arachis
duranensis]
Length = 223
Score = 79.0 bits (193), Expect = 9e-16
Identities = 41/63 (65%), Positives = 49/63 (77%)
Frame = +2
Query: 137 GSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSLFGQLPKPEALGLCVSLRS 316
G+V+S RYF RRTVLEML DRGY VP S+L T SL EFRSL+G++P E L + VSLRS
Sbjct: 20 GTVESSRYFHARRTVLEMLRDRGYDVPDSEL-TRSLAEFRSLYGRIPNAETLRISVSLRS 78
Query: 317 NPS 325
+PS
Sbjct: 79 DPS 81
>XP_014499453.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C [Vigna radiata
var. radiata]
Length = 213
Score = 77.0 bits (188), Expect = 4e-15
Identities = 44/75 (58%), Positives = 49/75 (65%)
Frame = +2
Query: 101 ECIVEMEISGGGGSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSLFGQLPK 280
ECI + GSV+S RYF RRTVLEML+DRGY V T+SL +FRS FGQ P
Sbjct: 2 ECIASLI---DNGSVESSRYFLSRRTVLEMLADRGYDVVQHANLTSSLSDFRSRFGQQPN 58
Query: 281 PEALGLCVSLRSNPS 325
EALG CVS SNPS
Sbjct: 59 HEALGFCVSHLSNPS 73
>XP_003539245.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C [Glycine max]
XP_006591190.1 PREDICTED: DNA-directed RNA polymerase V
subunit 5C [Glycine max] KHN21306.1 DNA-directed RNA
polymerases I, II, and III subunit RPABC1 [Glycine soja]
KRH30041.1 hypothetical protein GLYMA_11G154500 [Glycine
max]
Length = 214
Score = 75.5 bits (184), Expect = 2e-14
Identities = 41/75 (54%), Positives = 49/75 (65%)
Frame = +2
Query: 101 ECIVEMEISGGGGSVDSIRYFECRRTVLEMLSDRGYAVPPSDLTTTSLPEFRSLFGQLPK 280
ECI +M + GS++S+RYF RRT+LEML DRGY V + SL EFRS FGQ P
Sbjct: 2 ECIAKM--TKDNGSMESLRYFLSRRTLLEMLQDRGYDVVQHANLSPSLAEFRSRFGQNPN 59
Query: 281 PEALGLCVSLRSNPS 325
P+ L CVS SNPS
Sbjct: 60 PQTLAFCVSHLSNPS 74