BLASTX nr result

ID: Glycyrrhiza32_contig00033940 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza32_contig00033940
         (279 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP77941.1 Retrovirus-related Pol polyprotein from transposon TN...    78   3e-15
KYP66030.1 Retrovirus-related Pol polyprotein from transposon TN...    70   5e-13
KYP62517.1 Retrovirus-related Pol polyprotein from transposon TN...    70   2e-12
KYP36341.1 Retrovirus-related Pol polyprotein from transposon TN...    70   2e-12
XP_010918185.1 PREDICTED: uncharacterized protein LOC105042593 [...    54   2e-06

>KYP77941.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 270

 Score = 77.8 bits (190), Expect = 3e-15
 Identities = 34/54 (62%), Positives = 44/54 (81%)
 Frame = +1

Query: 7   RDMSIVKCHYCEELGHIQFKCPIFMEDLRSLKEKTEKLKTAPSTNVVSYENDIL 168
           RDMS V+CHYC +LGHIQ +CP F EDL+S+KEK  + K A STNVVSYE++++
Sbjct: 217 RDMSTVECHYCGQLGHIQMRCPDFREDLQSMKEKRGRSKGASSTNVVSYEDELI 270


>KYP66030.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 168

 Score = 70.1 bits (170), Expect = 5e-13
 Identities = 30/56 (53%), Positives = 41/56 (73%)
 Frame = +1

Query: 1   QPRDMSIVKCHYCEELGHIQFKCPIFMEDLRSLKEKTEKLKTAPSTNVVSYENDIL 168
           QP+DMS ++CHYC E GHIQFKCP F EDL+ +KEK    K+ PS +V  Y++ ++
Sbjct: 116 QPKDMSNIQCHYCGEFGHIQFKCPEFKEDLKCMKEKK---KSTPSVSVACYDDGLM 168


>KYP62517.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 267

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 31/56 (55%), Positives = 41/56 (73%)
 Frame = +1

Query: 1   QPRDMSIVKCHYCEELGHIQFKCPIFMEDLRSLKEKTEKLKTAPSTNVVSYENDIL 168
           QP+DMS V+CHYC E GHIQFKCP F EDL+ +KEK    K+ PS +V  Y++ ++
Sbjct: 215 QPKDMSNVQCHYCGEFGHIQFKCPEFKEDLKCMKEKK---KSIPSVSVACYDDGLM 267


>KYP36341.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan] KYP52429.1 Retrovirus-related Pol
           polyprotein from transposon TNT 1-94 [Cajanus cajan]
          Length = 267

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 30/56 (53%), Positives = 41/56 (73%)
 Frame = +1

Query: 1   QPRDMSIVKCHYCEELGHIQFKCPIFMEDLRSLKEKTEKLKTAPSTNVVSYENDIL 168
           QP+DMS ++CHYC E GHIQFKCP F EDL+ +KEK    K+ PS +V  Y++ ++
Sbjct: 215 QPKDMSNIQCHYCGEFGHIQFKCPEFKEDLKCMKEKK---KSTPSVSVACYDDGLM 267


>XP_010918185.1 PREDICTED: uncharacterized protein LOC105042593 [Elaeis guineensis]
          Length = 373

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 24/41 (58%), Positives = 28/41 (68%)
 Frame = +1

Query: 1   QPRDMSIVKCHYCEELGHIQFKCPIFMEDLRSLKEKTEKLK 123
           QP+D S V+CHYC E GHIQ   P F EDL S+KE  +K K
Sbjct: 110 QPKDFSTVECHYCREFGHIQVCYPKFREDLTSMKELKDKSK 150


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